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The map label for this gene is 197118300

Identifier: 197118300

GI number: 197118300

Start: 2216792

End: 2217193

Strand: Reverse

Name: 197118300

Synonym: Gbem_1917

Alternate gene names: NA

Gene position: 2217193-2216792 (Counterclockwise)

Preceding gene: 197118301

Following gene: 197118299

Centisome position: 48.04

GC content: 50.25

Gene sequence:

>402_bases
ATGATCGCCCTCGATACCAATATCCTGGTGCGGTACCTGATCAAGGACGATCCCGACCAAGCTGTACTGGCGACCAATTT
TTTAGCAAACAACCGATGCTTTCTTCACAAGTCGGTCCTTCTCGAACTTGTCTGGGTGTTGGCGTCGCCAGCCGGTTATA
AGCTCTCCCGGGAAACGGTACACGAAAGACTGCTCCACGTTCTCGGTCTTTCCTGTATTGAAAGTGAAGACCCCACCATT
GTATCCCAAGCGCTTACGTGGTATGCGGAAGGCATGGACTTCGGTGACGCCCTCCATCTAGCCAGTAGCAGTGAACTTGC
TGGCCTTGCGACTTTTGATAAGAAATTTGCATCAACTGCTGAAAAGCTAGATGCGAAGCCCCCGATTACTCTAATCAGTT
AA

Upstream 100 bases:

>100_bases
CTCAGCTGGAGGCCCCCGACACCCCTTCAGTGTATCGTGGCAAGCGGCTTTCTTTGGAGGATATGGAACAGGCTATCCTC
TCCGAAGCTGGTAAGCATCT

Downstream 100 bases:

>100_bases
TCCCATCATAACGTCGCGGCGTGACCTGCGGAGCGCTCGGCTCCCTCCAGCTTTTTCCAACTTTTATCAACTGCAGAGAC
CTGGTCCACGCACATTGTTG

Product: PIN domain-containing protein

Products: NA

Alternate protein names: PilT Protein-Like; PIN Domain-Containing Protein; PilT Protein Domain Protein; PilT-Like Protein; PilT Domain-Containing Protein

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MIALDTNILVRYLIKDDPDQAVLATNFLANNRCFLHKSVLLELVWVLASPAGYKLSRETVHERLLHVLGLSCIESEDPTI
VSQALTWYAEGMDFGDALHLASSSELAGLATFDKKFASTAEKLDAKPPITLIS

Sequences:

>Translated_133_residues
MIALDTNILVRYLIKDDPDQAVLATNFLANNRCFLHKSVLLELVWVLASPAGYKLSRETVHERLLHVLGLSCIESEDPTI
VSQALTWYAEGMDFGDALHLASSSELAGLATFDKKFASTAEKLDAKPPITLIS
>Mature_133_residues
MIALDTNILVRYLIKDDPDQAVLATNFLANNRCFLHKSVLLELVWVLASPAGYKLSRETVHERLLHVLGLSCIESEDPTI
VSQALTWYAEGMDFGDALHLASSSELAGLATFDKKFASTAEKLDAKPPITLIS

Specific function: Unknown

COG id: COG5611

COG function: function code R; Predicted nucleic-acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14615; Mature: 14615

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALDTNILVRYLIKDDPDQAVLATNFLANNRCFLHKSVLLELVWVLASPAGYKLSRETV
CEEECHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
HERLLHVLGLSCIESEDPTIVSQALTWYAEGMDFGDALHLASSSELAGLATFDKKFASTA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHH
EKLDAKPPITLIS
HHCCCCCCEEECC
>Mature Secondary Structure
MIALDTNILVRYLIKDDPDQAVLATNFLANNRCFLHKSVLLELVWVLASPAGYKLSRETV
CEEECHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH
HERLLHVLGLSCIESEDPTIVSQALTWYAEGMDFGDALHLASSSELAGLATFDKKFASTA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHH
EKLDAKPPITLIS
HHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA