| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118299
Identifier: 197118299
GI number: 197118299
Start: 2216310
End: 2216528
Strand: Reverse
Name: 197118299
Synonym: Gbem_1916
Alternate gene names: NA
Gene position: 2216528-2216310 (Counterclockwise)
Preceding gene: 197118300
Following gene: 308535273
Centisome position: 48.03
GC content: 54.34
Gene sequence:
>219_bases ATGCCCGCCAACCCCAAACAACTCGATCTTACAGCCCTTTCTCCTTCCGCACGCCGGGAGATGAGGGACTTTTACCAGTT TTTGCTGTCCCGCCAGACAAAACAGCCCCGACGGAATTCACTACCGGGGAAGAGCAATGGTTTTACCAAGCTCTGTGGCA AGTTGTCCTGGAAAGGGGACGCAGTAGCAGTTCAGCGGAGCATGCGTGATGAGTGGTAA
Upstream 100 bases:
>100_bases ATCTTGTAATGCTTTGTGTTTGGCGCTTCGCTAGGCGCCATGTACTCTTGCCAGGTTTTCCCCCTTATGCTACTGTTTCC AGGCCGAAGGAGGTCACATC
Downstream 100 bases:
>100_bases CCGCCGGTTTCTGCTAGATACGAATGCTGTTGTCTCCCTTCTAGCCGGAAATCGTGACCTTGCCGATAAACTTGAAACTG CCGAGTACGTTGGCATCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MPANPKQLDLTALSPSARREMRDFYQFLLSRQTKQPRRNSLPGKSNGFTKLCGKLSWKGDAVAVQRSMRDEW
Sequences:
>Translated_72_residues MPANPKQLDLTALSPSARREMRDFYQFLLSRQTKQPRRNSLPGKSNGFTKLCGKLSWKGDAVAVQRSMRDEW >Mature_71_residues PANPKQLDLTALSPSARREMRDFYQFLLSRQTKQPRRNSLPGKSNGFTKLCGKLSWKGDAVAVQRSMRDEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8298; Mature: 8166
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANPKQLDLTALSPSARREMRDFYQFLLSRQTKQPRRNSLPGKSNGFTKLCGKLSWKGD CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCC AVAVQRSMRDEW HHHHHHHHCCCC >Mature Secondary Structure PANPKQLDLTALSPSARREMRDFYQFLLSRQTKQPRRNSLPGKSNGFTKLCGKLSWKGD CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCC AVAVQRSMRDEW HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA