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The map label for this gene is yhbY [H]

Identifier: 197118277

GI number: 197118277

Start: 2193608

End: 2193910

Strand: Reverse

Name: yhbY [H]

Synonym: Gbem_1894

Alternate gene names: 197118277

Gene position: 2193910-2193608 (Counterclockwise)

Preceding gene: 197118288

Following gene: 197118275

Centisome position: 47.54

GC content: 60.07

Gene sequence:

>303_bases
ATGTTGACAGGTAAACAGAAGAGATTTCTCCGGGCGCTCGGACATGGCCTGAAACCGGTGATCCAGGTTGGAAAGAGCGA
CGTGAGCGAGGCGCTGATCCGCGAGACCGGCGAGGCGCTGGCTAGCCACGAGTTGATCAAGGTGAAAGTGCTGGAGAGCT
GCATGATGGACCGCCACAGCGTGGCTGAAGAACTCTGCAACGCGTGCCAGGCCGACCTGGCGCAGGTGCTGGGGCGAACC
CTGCTCCTCTACAAGCCGGCCAAGGAACCTAAGCTGGAACTCCCCAAGACGGAGAAGAAGTAG

Upstream 100 bases:

>100_bases
CCGTTTAATCCGTGTGCAAGGTCTTTCTGGTTTGCCTTACCCTGGGCAAAGTGCTATAAAGCTCGCACCGTTTCGGAATA
TGGATAAAAGGAAGAACTAG

Downstream 100 bases:

>100_bases
GCAAAGGCACTCACCACAGAGGTACACAGAGGAACCACAGAGGAAAGACAAAAGGCTAAAGCCTTTGATTTTCCCTAAAA
ACGCTTTGTGATTTTCCTGC

Product: RNA-binding protein YhbY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MLTGKQKRFLRALGHGLKPVIQVGKSDVSEALIRETGEALASHELIKVKVLESCMMDRHSVAEELCNACQADLAQVLGRT
LLLYKPAKEPKLELPKTEKK

Sequences:

>Translated_100_residues
MLTGKQKRFLRALGHGLKPVIQVGKSDVSEALIRETGEALASHELIKVKVLESCMMDRHSVAEELCNACQADLAQVLGRT
LLLYKPAKEPKLELPKTEKK
>Mature_100_residues
MLTGKQKRFLRALGHGLKPVIQVGKSDVSEALIRETGEALASHELIKVKVLESCMMDRHSVAEELCNACQADLAQVLGRT
LLLYKPAKEPKLELPKTEKK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=95, Percent_Identity=40, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 11079; Mature: 11079

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGKQKRFLRALGHGLKPVIQVGKSDVSEALIRETGEALASHELIKVKVLESCMMDRHS
CCCCHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAEELCNACQADLAQVLGRTLLLYKPAKEPKLELPKTEKK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTGKQKRFLRALGHGLKPVIQVGKSDVSEALIRETGEALASHELIKVKVLESCMMDRHS
CCCCHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAEELCNACQADLAQVLGRTLLLYKPAKEPKLELPKTEKK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]