Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118151

Identifier: 197118151

GI number: 197118151

Start: 2034494

End: 2035192

Strand: Reverse

Name: 197118151

Synonym: Gbem_1766

Alternate gene names: NA

Gene position: 2035192-2034494 (Counterclockwise)

Preceding gene: 197118185

Following gene: 197118150

Centisome position: 44.1

GC content: 50.07

Gene sequence:

>699_bases
ATGAAACGCATGGCTGCAATGTTGGCAGGTATGATGCTGATCTTAGGCATCGGAACAACGGCACAAGCCCTCACTTTAAC
AGTTACAAGTGGAACAGAGTCCAAGACGATCACAGATGGACAAGTCGGCGACATGAGTGGCATAACTGGTAAGATTAGCT
TTATGGACATGGTAGTAGGCAACTACCTAGTAACGGTCGAGTCCGCACAGGGATTTAGCCATCCATATGCCTCTTGGCCG
CAAGCCCTTCACCTAAATGCTGTGTTCACATCTTCCACCCTCGGAGGGTCACTCACTTTCACGTTGACTGACTCTGGGTT
ATCTTTACCGAGCCTGAGGACAGACTTATCGCCCAACGCTCTCGTGAAGTATGGGATTGGTGGGTCCATCAAGGCTGGAG
ACCAAATTACCAACACAGTAACTTACAGTACCGATGGCACTAGCACGCAACAACTCCCGGAACTCTCCTTAATTAACTCA
GGGATGTCCTTCCAAGCGGAGGACAGTGCGCTCTTGGATTTAGTCAACCCCTTCACCCTTAGCGAGGTTGTGACTATCGA
TTTCGGACGTAATCGGGGGACGTCTAGCTTCGATGCCGGAGTAGACATCATCCCCACTCCGGAACCTGCGACCATGGTAC
TTTTTGGGGCTGGCTTACTTAGCCTTGCTATCTATTGTAAACGCCGGAAAAACGTATAG

Upstream 100 bases:

>100_bases
TGTATTTATAACGCCTGAAAGCTTTGGCACCGCAGTTGCATCAGCATCGCACACTACGATTCGGATAATGGAGCAACTTG
TGGATAAAGGAGACCATAAT

Downstream 100 bases:

>100_bases
ATGCCAGGCAGTCATGAGAATTGGCGGCACTTCCAAGTGCCGCCTTTTTTTCGTACAACACGTGCAAAAAGTGACGCTGG
CACAGCATGTCAAGAAACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKRMAAMLAGMMLILGIGTTAQALTLTVTSGTESKTITDGQVGDMSGITGKISFMDMVVGNYLVTVESAQGFSHPYASWP
QALHLNAVFTSSTLGGSLTFTLTDSGLSLPSLRTDLSPNALVKYGIGGSIKAGDQITNTVTYSTDGTSTQQLPELSLINS
GMSFQAEDSALLDLVNPFTLSEVVTIDFGRNRGTSSFDAGVDIIPTPEPATMVLFGAGLLSLAIYCKRRKNV

Sequences:

>Translated_232_residues
MKRMAAMLAGMMLILGIGTTAQALTLTVTSGTESKTITDGQVGDMSGITGKISFMDMVVGNYLVTVESAQGFSHPYASWP
QALHLNAVFTSSTLGGSLTFTLTDSGLSLPSLRTDLSPNALVKYGIGGSIKAGDQITNTVTYSTDGTSTQQLPELSLINS
GMSFQAEDSALLDLVNPFTLSEVVTIDFGRNRGTSSFDAGVDIIPTPEPATMVLFGAGLLSLAIYCKRRKNV
>Mature_232_residues
MKRMAAMLAGMMLILGIGTTAQALTLTVTSGTESKTITDGQVGDMSGITGKISFMDMVVGNYLVTVESAQGFSHPYASWP
QALHLNAVFTSSTLGGSLTFTLTDSGLSLPSLRTDLSPNALVKYGIGGSIKAGDQITNTVTYSTDGTSTQQLPELSLINS
GMSFQAEDSALLDLVNPFTLSEVVTIDFGRNRGTSSFDAGVDIIPTPEPATMVLFGAGLLSLAIYCKRRKNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24334; Mature: 24334

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMAAMLAGMMLILGIGTTAQALTLTVTSGTESKTITDGQVGDMSGITGKISFMDMVVG
CHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCEEHHHHHEECC
NYLVTVESAQGFSHPYASWPQALHLNAVFTSSTLGGSLTFTLTDSGLSLPSLRTDLSPNA
CEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCHHCCCCCCC
LVKYGIGGSIKAGDQITNTVTYSTDGTSTQQLPELSLINSGMSFQAEDSALLDLVNPFTL
EEEECCCCCCCCCCCEEEEEEECCCCCCHHHCCCHHHHCCCCCCCCCCHHHHHHCCCCCC
SEVVTIDFGRNRGTSSFDAGVDIIPTPEPATMVLFGAGLLSLAIYCKRRKNV
EEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRMAAMLAGMMLILGIGTTAQALTLTVTSGTESKTITDGQVGDMSGITGKISFMDMVVG
CHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCEEHHHHHEECC
NYLVTVESAQGFSHPYASWPQALHLNAVFTSSTLGGSLTFTLTDSGLSLPSLRTDLSPNA
CEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCCCHHCCCCCCC
LVKYGIGGSIKAGDQITNTVTYSTDGTSTQQLPELSLINSGMSFQAEDSALLDLVNPFTL
EEEECCCCCCCCCCCEEEEEEECCCCCCHHHCCCHHHHCCCCCCCCCCHHHHHHCCCCCC
SEVVTIDFGRNRGTSSFDAGVDIIPTPEPATMVLFGAGLLSLAIYCKRRKNV
EEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA