Click here to switch to the map view.

The map label for this gene is cooS-1 [H]

Identifier: 197118121

GI number: 197118121

Start: 1998981

End: 2000981

Strand: Reverse

Name: cooS-1 [H]

Synonym: Gbem_1736

Alternate gene names: 197118121

Gene position: 2000981-1998981 (Counterclockwise)

Preceding gene: 308535260

Following gene: 197118120

Centisome position: 43.36

GC content: 65.82

Gene sequence:

>2001_bases
ATGACCAAGAAGAACACCTTCCCCAGCAAAGCAGACGTCATCGCATCGACCCCGGACCCGGCAGTTCGGGAGATGCTGCG
CCATATGGAGGCGGCCGGGATCGAGACGCCATTCGACCGGTTCGATGCCCAGAAGCCGCATTGCGGATTCGGCCTGAACG
GGACCTGTTGCAAGAACTGCCATATGGGCCCCTGCCGCATCACCCCCAAGAGCCCCAAGGGTGTCTGCGGCGCCGACGCG
CACCTCATCGTCGCCCGCAACATGCTCCGCTGGACCGCAGCCGGCGTCGCCGCACATGGCGCACGCGGCCGTGAAGTTAT
GCTGGCGCTGAAGGGCGCTGCCGACGGCTCCCTCGACCTGCCGATCCTCGGTCCCGAGAAGGTGATCGCCACGGCGAAGT
CGTTCGGCATCCACGACGAGGCAAAGAGCATCGAGGAGATGGCGGGTGAAATAGCCATGATCCTTTTGGAGGACCTCTGC
CGCACCATCCCCGGCCCGCATAAGACCCTGGAAGCGATGGCCCCGGCCGAGCGCATCCAGGTCTGGAAGGACCTGGACAT
TCTCCCGATCGGCGCCTACCACGAGGTCTTCGAGGCGCTGCACCGCACCGGCACCGGCACCGACGGCGACTGGCGCAACG
TGGCGGACCAGATACTGCGCTGCGGCCTCGCCTTTGCCTGGAGCAGCGTGGTCGGCTCGGCCATCGCCATGGACTGCCTC
TACGGCCTCCCCAAAAGAAGCCGCGTGAGCACCAACCTGGGCGCCATCACCCTGGACAGCGTCAACATCGCGGTTCACGG
CCACTCGCCCGTGCTGGTGGCTGCCATCGTCAAGGCTGCGCGCGGCGAAACGTTGCTCTCCGAGGCACGTGCCGCCGGCG
CCGGCACTATCAAGCTCTACGGCATCTGCTGCTCCGGACACTCGGCTCTGGCAAAGTTCGGCGACATAACGCCCTTGGCC
AACGCGGCAGGCGCGGAACTGACCCTGGCCACTGGCGCCCTGGATCTCTGGGTAGCCGACGTGCAGGACGTCTTCCCGGG
AATCATGGACGTCGCCGCCTGCTTCCACACCCGGGTGGTCACCACCAGCGACTCCGCCAGGCTTCCGGGCGCAGAGCACA
TCGCCTTCGACCACCACCACTCGAACCTCGACCAGGCGGACATTCTTGCCGAGCGCATCGTCCGCCGCGGCATACAGGCC
TACGGCGAGCGCCAGGCCGGCAAAGTGTTCGTCCCCAAGGCCCGCATGGATGCCGAGGTCGGCTTCTCTGTCGAGAACAT
CCTGGCGACCTTCGGCGGCGCCGAGCCGTTGCTGGAGCACCTGAAAAGCGGCCGCATCCGCGGCGTGGTGAACCTGGTGG
GGTGCAACAACCCGAAGGTGGTGTACGAAGAGGCCATCGTCAGGGTGGCCGAGGAACTGATCGCCCACGACGTGCTGGCG
CTCACCAACGGCTGCGCCGCTTTCGCCCTTTTGAAGATGGGGTTCTGCCTCCCCGAAGGGCTGGAAGGAAGCGGACCGGG
GCTCAACGCGGCACTCGCGCCTCTCAACCTCCCGCCGGTGTGGCACATGGGTGAATGCCTCGACAACGCAAGGGCCTCCG
CCTTTTTCCGGACCATCTCCGCGGCTTCCGGTGAATCGCTCCCCCGGCTGCCGCTCGCAGTTTCCAGTCCCGAGTGGTCC
AACGAGAAAGGTGTCGGGGCGGCCTTAAGCTTCCGCTTGTTGGGGCTCAACTCCTATCACTGCATCACGCCGCCGGTCGC
AGGCTCCGACCGGGTCTCCGATTTCTTCTATCAGGACACCAGGGAGACACTCGGCTCAGTAATGGTGGTTGACCAGGACC
CGGTCCAGTTGGCCCAGCGCATAGTGGCAGACTTCGACCAGCGGCGGGAGGCCCTGGGTTGGCAGAGCGCAGCCCCTGCG
GCCAACGGGCGCCTCTCCGCGCTGCAGGAAGAAAAGGCACACCAATTCGCCCACGATCATGGGCACACGCACAGTCACTA
G

Upstream 100 bases:

>100_bases
CACAGGCTACAAAATTTTCCAATTTTCTTGACAAATACAGGGTGGTACTGGTAAAGACAGCCAACATCGATTACATCAAC
TTTAACCATAGCGAGCACAC

Downstream 100 bases:

>100_bases
GAGGGAGAGTAGACATGAACAGACGCGAATTTATCAAGACGACAGGCCTCGCGCTGGCCGCGGCGGCAGTACCGGGTTTT
GCCTTTGCGGGAGGCGCCAA

Product: carbon monoxide dehydrogenase catalytic subunit

Products: NA

Alternate protein names: CODH 1 [H]

Number of amino acids: Translated: 666; Mature: 665

Protein sequence:

>666_residues
MTKKNTFPSKADVIASTPDPAVREMLRHMEAAGIETPFDRFDAQKPHCGFGLNGTCCKNCHMGPCRITPKSPKGVCGADA
HLIVARNMLRWTAAGVAAHGARGREVMLALKGAADGSLDLPILGPEKVIATAKSFGIHDEAKSIEEMAGEIAMILLEDLC
RTIPGPHKTLEAMAPAERIQVWKDLDILPIGAYHEVFEALHRTGTGTDGDWRNVADQILRCGLAFAWSSVVGSAIAMDCL
YGLPKRSRVSTNLGAITLDSVNIAVHGHSPVLVAAIVKAARGETLLSEARAAGAGTIKLYGICCSGHSALAKFGDITPLA
NAAGAELTLATGALDLWVADVQDVFPGIMDVAACFHTRVVTTSDSARLPGAEHIAFDHHHSNLDQADILAERIVRRGIQA
YGERQAGKVFVPKARMDAEVGFSVENILATFGGAEPLLEHLKSGRIRGVVNLVGCNNPKVVYEEAIVRVAEELIAHDVLA
LTNGCAAFALLKMGFCLPEGLEGSGPGLNAALAPLNLPPVWHMGECLDNARASAFFRTISAASGESLPRLPLAVSSPEWS
NEKGVGAALSFRLLGLNSYHCITPPVAGSDRVSDFFYQDTRETLGSVMVVDQDPVQLAQRIVADFDQRREALGWQSAAPA
ANGRLSALQEEKAHQFAHDHGHTHSH

Sequences:

>Translated_666_residues
MTKKNTFPSKADVIASTPDPAVREMLRHMEAAGIETPFDRFDAQKPHCGFGLNGTCCKNCHMGPCRITPKSPKGVCGADA
HLIVARNMLRWTAAGVAAHGARGREVMLALKGAADGSLDLPILGPEKVIATAKSFGIHDEAKSIEEMAGEIAMILLEDLC
RTIPGPHKTLEAMAPAERIQVWKDLDILPIGAYHEVFEALHRTGTGTDGDWRNVADQILRCGLAFAWSSVVGSAIAMDCL
YGLPKRSRVSTNLGAITLDSVNIAVHGHSPVLVAAIVKAARGETLLSEARAAGAGTIKLYGICCSGHSALAKFGDITPLA
NAAGAELTLATGALDLWVADVQDVFPGIMDVAACFHTRVVTTSDSARLPGAEHIAFDHHHSNLDQADILAERIVRRGIQA
YGERQAGKVFVPKARMDAEVGFSVENILATFGGAEPLLEHLKSGRIRGVVNLVGCNNPKVVYEEAIVRVAEELIAHDVLA
LTNGCAAFALLKMGFCLPEGLEGSGPGLNAALAPLNLPPVWHMGECLDNARASAFFRTISAASGESLPRLPLAVSSPEWS
NEKGVGAALSFRLLGLNSYHCITPPVAGSDRVSDFFYQDTRETLGSVMVVDQDPVQLAQRIVADFDQRREALGWQSAAPA
ANGRLSALQEEKAHQFAHDHGHTHSH
>Mature_665_residues
TKKNTFPSKADVIASTPDPAVREMLRHMEAAGIETPFDRFDAQKPHCGFGLNGTCCKNCHMGPCRITPKSPKGVCGADAH
LIVARNMLRWTAAGVAAHGARGREVMLALKGAADGSLDLPILGPEKVIATAKSFGIHDEAKSIEEMAGEIAMILLEDLCR
TIPGPHKTLEAMAPAERIQVWKDLDILPIGAYHEVFEALHRTGTGTDGDWRNVADQILRCGLAFAWSSVVGSAIAMDCLY
GLPKRSRVSTNLGAITLDSVNIAVHGHSPVLVAAIVKAARGETLLSEARAAGAGTIKLYGICCSGHSALAKFGDITPLAN
AAGAELTLATGALDLWVADVQDVFPGIMDVAACFHTRVVTTSDSARLPGAEHIAFDHHHSNLDQADILAERIVRRGIQAY
GERQAGKVFVPKARMDAEVGFSVENILATFGGAEPLLEHLKSGRIRGVVNLVGCNNPKVVYEEAIVRVAEELIAHDVLAL
TNGCAAFALLKMGFCLPEGLEGSGPGLNAALAPLNLPPVWHMGECLDNARASAFFRTISAASGESLPRLPLAVSSPEWSN
EKGVGAALSFRLLGLNSYHCITPPVAGSDRVSDFFYQDTRETLGSVMVVDQDPVQLAQRIVADFDQRREALGWQSAAPAA
NGRLSALQEEKAHQFAHDHGHTHSH

Specific function: Unknown

COG id: COG1151

COG function: function code C; 6Fe-6S prismane cluster-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Ni-containing carbon monoxide dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016101
- InterPro:   IPR010047
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099 [H]

Pfam domain/function: PF03063 Prismane [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 70908; Mature: 70777

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKNTFPSKADVIASTPDPAVREMLRHMEAAGIETPFDRFDAQKPHCGFGLNGTCCKNC
CCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
HMGPCRITPKSPKGVCGADAHLIVARNMLRWTAAGVAAHGARGREVMLALKGAADGSLDL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
PILGPEKVIATAKSFGIHDEAKSIEEMAGEIAMILLEDLCRTIPGPHKTLEAMAPAERIQ
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHH
VWKDLDILPIGAYHEVFEALHRTGTGTDGDWRNVADQILRCGLAFAWSSVVGSAIAMDCL
HHHCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGLPKRSRVSTNLGAITLDSVNIAVHGHSPVLVAAIVKAARGETLLSEARAAGAGTIKLY
HCCCCCCCCCCCCCEEEEECEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEE
GICCSGHSALAKFGDITPLANAAGAELTLATGALDLWVADVQDVFPGIMDVAACFHTRVV
EEEECCHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
TTSDSARLPGAEHIAFDHHHSNLDQADILAERIVRRGIQAYGERQAGKVFVPKARMDAEV
ECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
GFSVENILATFGGAEPLLEHLKSGRIRGVVNLVGCNNPKVVYEEAIVRVAEELIAHDVLA
CCCHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LTNGCAAFALLKMGFCLPEGLEGSGPGLNAALAPLNLPPVWHMGECLDNARASAFFRTIS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
AASGESLPRLPLAVSSPEWSNEKGVGAALSFRLLGLNSYHCITPPVAGSDRVSDFFYQDT
HCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHH
RETLGSVMVVDQDPVQLAQRIVADFDQRREALGWQSAAPAANGRLSALQEEKAHQFAHDH
HHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
GHTHSH
CCCCCC
>Mature Secondary Structure 
TKKNTFPSKADVIASTPDPAVREMLRHMEAAGIETPFDRFDAQKPHCGFGLNGTCCKNC
CCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
HMGPCRITPKSPKGVCGADAHLIVARNMLRWTAAGVAAHGARGREVMLALKGAADGSLDL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
PILGPEKVIATAKSFGIHDEAKSIEEMAGEIAMILLEDLCRTIPGPHKTLEAMAPAERIQ
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHH
VWKDLDILPIGAYHEVFEALHRTGTGTDGDWRNVADQILRCGLAFAWSSVVGSAIAMDCL
HHHCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGLPKRSRVSTNLGAITLDSVNIAVHGHSPVLVAAIVKAARGETLLSEARAAGAGTIKLY
HCCCCCCCCCCCCCEEEEECEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEE
GICCSGHSALAKFGDITPLANAAGAELTLATGALDLWVADVQDVFPGIMDVAACFHTRVV
EEEECCHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEE
TTSDSARLPGAEHIAFDHHHSNLDQADILAERIVRRGIQAYGERQAGKVFVPKARMDAEV
ECCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
GFSVENILATFGGAEPLLEHLKSGRIRGVVNLVGCNNPKVVYEEAIVRVAEELIAHDVLA
CCCHHHHHHHCCCHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LTNGCAAFALLKMGFCLPEGLEGSGPGLNAALAPLNLPPVWHMGECLDNARASAFFRTIS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
AASGESLPRLPLAVSSPEWSNEKGVGAALSFRLLGLNSYHCITPPVAGSDRVSDFFYQDT
HCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHH
RETLGSVMVVDQDPVQLAQRIVADFDQRREALGWQSAAPAANGRLSALQEEKAHQFAHDH
HHHHCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
GHTHSH
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]