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The map label for this gene is nrtC [H]

Identifier: 197118120

GI number: 197118120

Start: 1998007

End: 1998966

Strand: Reverse

Name: nrtC [H]

Synonym: Gbem_1735

Alternate gene names: 197118120

Gene position: 1998966-1998007 (Counterclockwise)

Preceding gene: 197118121

Following gene: 197118119

Centisome position: 43.31

GC content: 61.88

Gene sequence:

>960_bases
ATGAACAGACGCGAATTTATCAAGACGACAGGCCTCGCGCTGGCCGCGGCGGCAGTACCGGGTTTTGCCTTTGCGGGAGG
CGCCAAGGTGAACATCAAGGTAGGCTACCTCCCCATCACCGACCACCTGTTGATGATCGCCAGCGAGCGGGAACAGTTCA
AGAGCGTCGGCATCCAGCCGGTCAAGTTCTCCTCGTGGCCCGAGATCTCCGAGGCCCTCAAGGTGGGCGCCATCGATGCG
GCCTTCCTGCTGACCCCCATCGGGCTGACCCTGCGCCAGAAAGGGGTGCCGGTCAAGGTAGTGCTCCTGGGGCATCGTAA
CGGCAGCGCCATCACCGTGAAAAACAGCAGCGAGATCAACCGCATCGAGGACCTGAAGGGAAAAACCATCGCCGTTCCCA
GCCCGTTTTCCACCCATAACCTTCTGCTGCGCAAAGTGCTGACCGAGAGGCACCTCGACCCGAACAAGGATCTGAAGATC
ATCGACATGGCGCCCCCCGAGATGGTGAACGCCCTGGCGACCGGACGCATCGAAGGTTATATCGTCGCCGAACCGTTCGG
CGCCCAGGCAGAGGCCCAGAAGGTCGGCAAGGTGCTCATGCTCTCCAAGGACATCTGGCACGACCACATCTGCTGCGTAC
TCAACGTGCGCGAGAGCGTGATAGCGAAGTACCCCGAAGCGGTCCAGGAGATGGTAGCCGGCTTCCTGCGCACCGCCTCC
TTCATCGAGACCAGCCCGGTGCTGGCGGCGAAGGGTTCGACGAAGGTACTCGGGCAGAGGCCGGAGATCGTCGAGAGGGT
GCTCACCTCCCCCCGCGACCGTCTGAGCTTCCAGAACCTCGTTCCCAACAAGAAGGATTTCGCGGCGACCCAGGACTACA
TGATCAAGTTCGGCGTCGCCAAGCAGAAGACCGACCTCGCCGGCTACCTTGACGACCGCTTCGCACGGAAGGCGGTGTAA

Upstream 100 bases:

>100_bases
CTGCGGCCAACGGGCGCCTCTCCGCGCTGCAGGAAGAAAAGGCACACCAATTCGCCCACGATCATGGGCACACGCACAGT
CACTAGGAGGGAGAGTAGAC

Downstream 100 bases:

>100_bases
CAGTGCGATCCTGGCTGGAAAATTACGTGGTACCGCTGCTTACCGTGGTGGCGTTCGTCCTTATCTGGCAGATCGCGGCA
AGGCGCTACCCGCCGGAACA

Product: aliphatic sulfonate ABC transporter substrate-binding protein

Products: taurine [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MNRREFIKTTGLALAAAAVPGFAFAGGAKVNIKVGYLPITDHLLMIASEREQFKSVGIQPVKFSSWPEISEALKVGAIDA
AFLLTPIGLTLRQKGVPVKVVLLGHRNGSAITVKNSSEINRIEDLKGKTIAVPSPFSTHNLLLRKVLTERHLDPNKDLKI
IDMAPPEMVNALATGRIEGYIVAEPFGAQAEAQKVGKVLMLSKDIWHDHICCVLNVRESVIAKYPEAVQEMVAGFLRTAS
FIETSPVLAAKGSTKVLGQRPEIVERVLTSPRDRLSFQNLVPNKKDFAATQDYMIKFGVAKQKTDLAGYLDDRFARKAV

Sequences:

>Translated_319_residues
MNRREFIKTTGLALAAAAVPGFAFAGGAKVNIKVGYLPITDHLLMIASEREQFKSVGIQPVKFSSWPEISEALKVGAIDA
AFLLTPIGLTLRQKGVPVKVVLLGHRNGSAITVKNSSEINRIEDLKGKTIAVPSPFSTHNLLLRKVLTERHLDPNKDLKI
IDMAPPEMVNALATGRIEGYIVAEPFGAQAEAQKVGKVLMLSKDIWHDHICCVLNVRESVIAKYPEAVQEMVAGFLRTAS
FIETSPVLAAKGSTKVLGQRPEIVERVLTSPRDRLSFQNLVPNKKDFAATQDYMIKFGVAKQKTDLAGYLDDRFARKAV
>Mature_319_residues
MNRREFIKTTGLALAAAAVPGFAFAGGAKVNIKVGYLPITDHLLMIASEREQFKSVGIQPVKFSSWPEISEALKVGAIDA
AFLLTPIGLTLRQKGVPVKVVLLGHRNGSAITVKNSSEINRIEDLKGKTIAVPSPFSTHNLLLRKVLTERHLDPNKDLKI
IDMAPPEMVNALATGRIEGYIVAEPFGAQAEAQKVGKVLMLSKDIWHDHICCVLNVRESVIAKYPEAVQEMVAGFLRTAS
FIETSPVLAAKGSTKVLGQRPEIVERVLTSPRDRLSFQNLVPNKKDFAATQDYMIKFGVAKQKTDLAGYLDDRFARKAV

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI87081727, Length=220, Percent_Identity=31.8181818181818, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 34910; Mature: 34910

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRREFIKTTGLALAAAAVPGFAFAGGAKVNIKVGYLPITDHLLMIASEREQFKSVGIQP
CCHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEEEEECCCCEEEEHHHHHHHHHCCCCC
VKFSSWPEISEALKVGAIDAAFLLTPIGLTLRQKGVPVKVVLLGHRNGSAITVKNSSEIN
EECCCCCCHHHHHHHCCCHHHHHHHHCCCEECCCCCCEEEEEEECCCCCEEEEECCCCHH
RIEDLKGKTIAVPSPFSTHNLLLRKVLTERHLDPNKDLKIIDMAPPEMVNALATGRIEGY
HHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCEE
IVAEPFGAQAEAQKVGKVLMLSKDIWHDHICCVLNVRESVIAKYPEAVQEMVAGFLRTAS
EEECCCCCCHHHHHHHHEEEEEHHCCCCCEEEEEECHHHHHHHCHHHHHHHHHHHHHHHH
FIETSPVLAAKGSTKVLGQRPEIVERVLTSPRDRLSFQNLVPNKKDFAATQDYMIKFGVA
HHHCCCCEEECCCCHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHCHHHEEEECCC
KQKTDLAGYLDDRFARKAV
CCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRREFIKTTGLALAAAAVPGFAFAGGAKVNIKVGYLPITDHLLMIASEREQFKSVGIQP
CCHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEEEEECCCCEEEEHHHHHHHHHCCCCC
VKFSSWPEISEALKVGAIDAAFLLTPIGLTLRQKGVPVKVVLLGHRNGSAITVKNSSEIN
EECCCCCCHHHHHHHCCCHHHHHHHHCCCEECCCCCCEEEEEEECCCCCEEEEECCCCHH
RIEDLKGKTIAVPSPFSTHNLLLRKVLTERHLDPNKDLKIIDMAPPEMVNALATGRIEGY
HHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCEE
IVAEPFGAQAEAQKVGKVLMLSKDIWHDHICCVLNVRESVIAKYPEAVQEMVAGFLRTAS
EEECCCCCCHHHHHHHHEEEEEHHCCCCCEEEEEECHHHHHHHCHHHHHHHHHHHHHHHH
FIETSPVLAAKGSTKVLGQRPEIVERVLTSPRDRLSFQNLVPNKKDFAATQDYMIKFGVA
HHHCCCCEEECCCCHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHCHHHEEEECCC
KQKTDLAGYLDDRFARKAV
CCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: taurine [Periplasm]; ATP; H2O [C]

Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]