| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118076
Identifier: 197118076
GI number: 197118076
Start: 1955541
End: 1956596
Strand: Direct
Name: 197118076
Synonym: Gbem_1690
Alternate gene names: NA
Gene position: 1955541-1956596 (Clockwise)
Preceding gene: 197118075
Following gene: 197118077
Centisome position: 42.37
GC content: 64.68
Gene sequence:
>1056_bases ATGAAGATCGTAATCTTCGGCCTTTCGATCACCTCGTCCTGGGGTAACGGCCACGCCACCACCTACCGCGGCCTTCTGCG CGAGATGGACCGGCGCGGCCACGAGGTGCAGTTTTTCGAGCGCGACGCCAAGTGGTACGCCGCCAATCGCGACCTCCCCG AGCCCTCCTTTTGCAACACCATACTCTACGACTCGCTGGAAACGCTCCTGGGAGAGTACGGCCCGGAGATCTGCGACGCC GATTGCGTCATCGTCGGCTCGTACGTGTACCAGGGGATCGAGGTCGGAAAGTGGGTGACGAAAAACGCCAAGGGGATCAC GGCATTCTACGACATCGACACACCGGTCACGCTCGCCTCCCTGGCCAAGGGGGAGTGCAGATACCTGAACCGGGAGCTGG TCCCGCACTACGACCTCTACCTCTCCTTCACCGGAGGGCCGACCCTCGACCAGATAGAGCGCCAATTCGGCTCCCCGGCG GCCCGTGCCCTTTACTGCTCGGTCGACCCGCAGGTGCATTACCCGATGCAGATCACGCCGCGCTGGGACCTGGGATACCT GGGGACCTACAGCCCCGATCGGCAGCTAGGCCTTGAGGAGCTTCTGAGCCGGTCGGCGCGCTCCTGGAAGAAAGGGCGCT TCGTGGTCGCCGGAGCGCAGTACCCCGCCGACGTGGCCTGGTCCGAAAACACGCACCGCATCGAGCACCTCCCGCCGGAG TGCCACAGCGAGTTTTACAGCTCGCAGCGGTTCACCCTGAACCTGACCCGGAAGCAGATGCTTCTCGCCGGATACTCCCC AAGCGTCAGGCTTTTCGAGGCGGCGTCCTGCGCGGTGCCGGTGGTGAGCGACCAGTGGCCCGGCCTGGACCATTTCTTCG TGCCGGGCGAGGAGATACTGCTCGCCTCCGATTCCCAGCAGATGCTCCGCATCCTGCAGCGCTTCCCGGAAAACGAGCGG CGGGCCATCGGCGAACGCGCGCGTCAAAGGGTGCTCCGCTCCCATTCCGCCGCCTGCAGGGCGGAAGAGTTGGAGGAGTA TCTGACCGCCAGGTGA
Upstream 100 bases:
>100_bases GGGCCCTGACCCGGGTGCGGGCGCAGCATACCTACGCCCACCGCGCCCGACAGTTCCAGGAGATCTTTTCAGCCGGGAAG CCGTATACCGGGGGGATGCC
Downstream 100 bases:
>100_bases CCTCTTCAATGTGCGATGGGGAGGCGGAACAGCGAAGGCGAAAAGGTGGAGTGACCATGTCGGCAGCTGCATCAATCAGT GAAATGGATGGTATCAAGGT
Product: glycosyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKIVIFGLSITSSWGNGHATTYRGLLREMDRRGHEVQFFERDAKWYAANRDLPEPSFCNTILYDSLETLLGEYGPEICDA DCVIVGSYVYQGIEVGKWVTKNAKGITAFYDIDTPVTLASLAKGECRYLNRELVPHYDLYLSFTGGPTLDQIERQFGSPA ARALYCSVDPQVHYPMQITPRWDLGYLGTYSPDRQLGLEELLSRSARSWKKGRFVVAGAQYPADVAWSENTHRIEHLPPE CHSEFYSSQRFTLNLTRKQMLLAGYSPSVRLFEAASCAVPVVSDQWPGLDHFFVPGEEILLASDSQQMLRILQRFPENER RAIGERARQRVLRSHSAACRAEELEEYLTAR
Sequences:
>Translated_351_residues MKIVIFGLSITSSWGNGHATTYRGLLREMDRRGHEVQFFERDAKWYAANRDLPEPSFCNTILYDSLETLLGEYGPEICDA DCVIVGSYVYQGIEVGKWVTKNAKGITAFYDIDTPVTLASLAKGECRYLNRELVPHYDLYLSFTGGPTLDQIERQFGSPA ARALYCSVDPQVHYPMQITPRWDLGYLGTYSPDRQLGLEELLSRSARSWKKGRFVVAGAQYPADVAWSENTHRIEHLPPE CHSEFYSSQRFTLNLTRKQMLLAGYSPSVRLFEAASCAVPVVSDQWPGLDHFFVPGEEILLASDSQQMLRILQRFPENER RAIGERARQRVLRSHSAACRAEELEEYLTAR >Mature_351_residues MKIVIFGLSITSSWGNGHATTYRGLLREMDRRGHEVQFFERDAKWYAANRDLPEPSFCNTILYDSLETLLGEYGPEICDA DCVIVGSYVYQGIEVGKWVTKNAKGITAFYDIDTPVTLASLAKGECRYLNRELVPHYDLYLSFTGGPTLDQIERQFGSPA ARALYCSVDPQVHYPMQITPRWDLGYLGTYSPDRQLGLEELLSRSARSWKKGRFVVAGAQYPADVAWSENTHRIEHLPPE CHSEFYSSQRFTLNLTRKQMLLAGYSPSVRLFEAASCAVPVVSDQWPGLDHFFVPGEEILLASDSQQMLRILQRFPENER RAIGERARQRVLRSHSAACRAEELEEYLTAR
Specific function: Unknown
COG id: COG4641
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39937; Mature: 39937
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVIFGLSITSSWGNGHATTYRGLLREMDRRGHEVQFFERDAKWYAANRDLPEPSFCNT CEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCCHHHHH ILYDSLETLLGEYGPEICDADCVIVGSYVYQGIEVGKWVTKNAKGITAFYDIDTPVTLAS HHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCHHHCCEEECCCCCEEEEEECCCCHHHHH LAKGECRYLNRELVPHYDLYLSFTGGPTLDQIERQFGSPAARALYCSVDPQVHYPMQITP HCCCHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCEECCEEECC RWDLGYLGTYSPDRQLGLEELLSRSARSWKKGRFVVAGAQYPADVAWSENTHRIEHLPPE CCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHH CHSEFYSSQRFTLNLTRKQMLLAGYSPSVRLFEAASCAVPVVSDQWPGLDHFFVPGEEIL HHHHHHCCCCEEEEECHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEE LASDSQQMLRILQRFPENERRAIGERARQRVLRSHSAACRAEELEEYLTAR EECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIVIFGLSITSSWGNGHATTYRGLLREMDRRGHEVQFFERDAKWYAANRDLPEPSFCNT CEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCCCHHHHH ILYDSLETLLGEYGPEICDADCVIVGSYVYQGIEVGKWVTKNAKGITAFYDIDTPVTLAS HHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCHHHCCEEECCCCCEEEEEECCCCHHHHH LAKGECRYLNRELVPHYDLYLSFTGGPTLDQIERQFGSPAARALYCSVDPQVHYPMQITP HCCCHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCEECCEEECC RWDLGYLGTYSPDRQLGLEELLSRSARSWKKGRFVVAGAQYPADVAWSENTHRIEHLPPE CCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHH CHSEFYSSQRFTLNLTRKQMLLAGYSPSVRLFEAASCAVPVVSDQWPGLDHFFVPGEEIL HHHHHHCCCCEEEEECHHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCEEE LASDSQQMLRILQRFPENERRAIGERARQRVLRSHSAACRAEELEEYLTAR EECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA