| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is mnhB
Identifier: 197118062
GI number: 197118062
Start: 1939691
End: 1940452
Strand: Reverse
Name: mnhB
Synonym: Gbem_1675
Alternate gene names: NA
Gene position: 1940452-1939691 (Counterclockwise)
Preceding gene: 197118063
Following gene: 197118061
Centisome position: 42.05
GC content: 65.35
Gene sequence:
>762_bases ATGAGCGAACGGTTCCGCATCATGCTCTACCTCGTTTCGGCGCTGGCCTTCGCGGCGGCGCTAGGCGCCGCATTCGCCGG GCTCCCGGAATTCGGCGCCTATTCCGGCGCCTACGGCCCCCTGGTGCTGGAAAGCATGCAGGGGATGCGGCACACCCAGC AGGGCGTTGCGGCGGTGACCTTCGACTACCGCGGCTTCGATACGCTGGGGGAGGAGTTCATGCTCTTCGCCGCGGTGGCA GGCGCCCTCCTTCTTTTGCGCCGGCAGGAATCGGAGCGCTTCCGGGAACCCAAGGACCAGGCAAGCGACCGCGCCGGCAT TGAACCGGCACCGGCTATCCTGGGGCTCGGCCTGTTGATGTTTCCTTTTACGCTGCTCCTGGGGATCTACGTGGTGCTGC ACGGGCACCTCACTCCGGGGGGCGGGTTCCAGGGAGGCGTTTTGCTGGCGACGGCCTTCTACTACGTCTATCTGAGCGGG GAGTACGGCGACCTTCTTGAGGTCGCCGCCGGCGACACCGTGGCACGGTTCGAGGCCGCGGGTGCGGCGGGGTTCCTCCT CCTGGGGACGGTCCCGCTCTTCGCGGCGCGTCCGTATCTGCAGAACGTGCTGCCGCTGGGAAACTTGGGGGAACTCTTCT CCGCAGGGACGCTCCCGCTTTTGAACTGCGCAGTGGGGATCGAGGTGACCGCCGCCTTTCTCCTGGTGATCTCGGCCTTT CTGAGGCAGGTACTCTTGATACGAAAGGGGAAACATTCATGA
Upstream 100 bases:
>100_bases AGGCGCCTGACGTAGCGCTTTCCGAGATGGTGGTCGGCGCCGTCGCCGTTCCGCTGATGGTACTGATAACGGTAGCGAAG ACCCGCTCCGGGAGGAAGCA
Downstream 100 bases:
>100_bases ACATGCTCCCGTTCCTTGTCGCACTCTGGCTCCTCCTGGTCGGGCTTTACGGGGTTTCGACCACGATAAACAGCATCCAC CTGGTCAGTTCCCTCTTCGT
Product: monovalent cation/proton antiporter subunit MnhB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSERFRIMLYLVSALAFAAALGAAFAGLPEFGAYSGAYGPLVLESMQGMRHTQQGVAAVTFDYRGFDTLGEEFMLFAAVA GALLLLRRQESERFREPKDQASDRAGIEPAPAILGLGLLMFPFTLLLGIYVVLHGHLTPGGGFQGGVLLATAFYYVYLSG EYGDLLEVAAGDTVARFEAAGAAGFLLLGTVPLFAARPYLQNVLPLGNLGELFSAGTLPLLNCAVGIEVTAAFLLVISAF LRQVLLIRKGKHS
Sequences:
>Translated_253_residues MSERFRIMLYLVSALAFAAALGAAFAGLPEFGAYSGAYGPLVLESMQGMRHTQQGVAAVTFDYRGFDTLGEEFMLFAAVA GALLLLRRQESERFREPKDQASDRAGIEPAPAILGLGLLMFPFTLLLGIYVVLHGHLTPGGGFQGGVLLATAFYYVYLSG EYGDLLEVAAGDTVARFEAAGAAGFLLLGTVPLFAARPYLQNVLPLGNLGELFSAGTLPLLNCAVGIEVTAAFLLVISAF LRQVLLIRKGKHS >Mature_252_residues SERFRIMLYLVSALAFAAALGAAFAGLPEFGAYSGAYGPLVLESMQGMRHTQQGVAAVTFDYRGFDTLGEEFMLFAAVAG ALLLLRRQESERFREPKDQASDRAGIEPAPAILGLGLLMFPFTLLLGIYVVLHGHLTPGGGFQGGVLLATAFYYVYLSGE YGDLLEVAAGDTVARFEAAGAAGFLLLGTVPLFAARPYLQNVLPLGNLGELFSAGTLPLLNCAVGIEVTAAFLLVISAFL RQVLLIRKGKHS
Specific function: Unknown
COG id: COG2111
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhB subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007182 [H]
Pfam domain/function: PF04039 MnhB [H]
EC number: NA
Molecular weight: Translated: 26900; Mature: 26769
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERFRIMLYLVSALAFAAALGAAFAGLPEFGAYSGAYGPLVLESMQGMRHTQQGVAAVT CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE FDYRGFDTLGEEFMLFAAVAGALLLLRRQESERFREPKDQASDRAGIEPAPAILGLGLLM ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHH FPFTLLLGIYVVLHGHLTPGGGFQGGVLLATAFYYVYLSGEYGDLLEVAAGDTVARFEAA HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHC GAAGFLLLGTVPLFAARPYLQNVLPLGNLGELFSAGTLPLLNCAVGIEVTAAFLLVISAF CCHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LRQVLLIRKGKHS HHHHHHHHCCCCC >Mature Secondary Structure SERFRIMLYLVSALAFAAALGAAFAGLPEFGAYSGAYGPLVLESMQGMRHTQQGVAAVT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE FDYRGFDTLGEEFMLFAAVAGALLLLRRQESERFREPKDQASDRAGIEPAPAILGLGLLM ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHH FPFTLLLGIYVVLHGHLTPGGGFQGGVLLATAFYYVYLSGEYGDLLEVAAGDTVARFEAA HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHC GAAGFLLLGTVPLFAARPYLQNVLPLGNLGELFSAGTLPLLNCAVGIEVTAAFLLVISAF CCHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LRQVLLIRKGKHS HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]