| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is mtaP [H]
Identifier: 197118043
GI number: 197118043
Start: 1923412
End: 1924275
Strand: Direct
Name: mtaP [H]
Synonym: Gbem_1656
Alternate gene names: 197118043
Gene position: 1923412-1924275 (Clockwise)
Preceding gene: 197118042
Following gene: 197118044
Centisome position: 41.68
GC content: 64.0
Gene sequence:
>864_bases ATGGCAAACGAGGTAATCGGCGTTATCGGCGGCAGCGGGCTCTACGAGATGGAAGGGATGACCGGCGTCGCCCAGGTGAC GGTCGACACCCCCTTCGGCAGGCCTAGCGACGAGTATGTGACCGGGACGCTGGACGGGGTCAGCATGGTATTCCTGCCGC GGCACGGCAAGGGTCACCGCTTCACCCCCAGCGAGGTGAACTACCGCGCCAACATCTACGGCATGAAGAAGTTGGGCGTC ACCCGCATCATCTCGGTGTCGGCCGTGGGTAGCCTCAGGGAGGAGATCGTTCCGGGGCACATCGTGATACCGGACCAGTT CATCGACCGCACCCGCGGCTTCAGAAAGGACACCTTCTTCGGAAACGGCGTGGTGGGGCACGTCCAGTTCGCCGACCCGG TCTGCGCAGAGCTTTCCGATCTTTTGCACGCGGCAGCCGTCGAGGTCGACGCGGTGGTGCACCGGGGAGGTTGCTACGTC TGCATGGAAGGGCCCGCCTTCTCCACCCGCGCCGAGAGCCACCTGTACCGCTCCTTCGGGGCCTCCATCATCGGCATGAC CAACCTCACCGAGGCGAAGCTCGCGCGCGAGGCGGAGATCTGCTACGGCGTCATCGCACTCTCCACCGACTACGACTGCT GGCACGACGCCCACGCGGACGTCTCGGTGGAGGCTATCATCGCCATCATCAAAAATAACGTAGCCACCGCCAAGAAGATC ATCCGCCAGGCCGTGGCGAAGGTCGCGGCAGGGCGCGGCTGCGGCTGCGGCGAGGCCCTCAAATACGCCATCATCAGCGA CACCTCCGTGATCCCGGTAGAGACCCGCGAGAACCTGGAGCTGATCATGGGGAAATACCTCTAA
Upstream 100 bases:
>100_bases GCGGCCAGCTCAAGGGACGGCTGGATCAGGAGGACGGCGAACGCCGCAACTGCGGCTGCGAAGGCTAGAGAGAACTGAAA TAAAATCCCTGGAGGTAGAG
Downstream 100 bases:
>100_bases GGAACCGGCAGCCTTTGCCGATAGATGCAGAATTAAGAATAGATTTGCCGTACCTCATCCCGCAACACTTCCAGGAGGTT TCATGAGCATACTTGTCGTT
Product: methylthioadenosine phosphorylase
Products: NA
Alternate protein names: 5'-methylthioadenosine phosphorylase; MTA phosphorylase [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MANEVIGVIGGSGLYEMEGMTGVAQVTVDTPFGRPSDEYVTGTLDGVSMVFLPRHGKGHRFTPSEVNYRANIYGMKKLGV TRIISVSAVGSLREEIVPGHIVIPDQFIDRTRGFRKDTFFGNGVVGHVQFADPVCAELSDLLHAAAVEVDAVVHRGGCYV CMEGPAFSTRAESHLYRSFGASIIGMTNLTEAKLAREAEICYGVIALSTDYDCWHDAHADVSVEAIIAIIKNNVATAKKI IRQAVAKVAAGRGCGCGEALKYAIISDTSVIPVETRENLELIMGKYL
Sequences:
>Translated_287_residues MANEVIGVIGGSGLYEMEGMTGVAQVTVDTPFGRPSDEYVTGTLDGVSMVFLPRHGKGHRFTPSEVNYRANIYGMKKLGV TRIISVSAVGSLREEIVPGHIVIPDQFIDRTRGFRKDTFFGNGVVGHVQFADPVCAELSDLLHAAAVEVDAVVHRGGCYV CMEGPAFSTRAESHLYRSFGASIIGMTNLTEAKLAREAEICYGVIALSTDYDCWHDAHADVSVEAIIAIIKNNVATAKKI IRQAVAKVAAGRGCGCGEALKYAIISDTSVIPVETRENLELIMGKYL >Mature_286_residues ANEVIGVIGGSGLYEMEGMTGVAQVTVDTPFGRPSDEYVTGTLDGVSMVFLPRHGKGHRFTPSEVNYRANIYGMKKLGVT RIISVSAVGSLREEIVPGHIVIPDQFIDRTRGFRKDTFFGNGVVGHVQFADPVCAELSDLLHAAAVEVDAVVHRGGCYVC MEGPAFSTRAESHLYRSFGASIIGMTNLTEAKLAREAEICYGVIALSTDYDCWHDAHADVSVEAIIAIIKNNVATAKKII RQAVAKVAAGRGCGCGEALKYAIISDTSVIPVETRENLELIMGKYL
Specific function: Catalyzes the formation of methylthio-D-ribose 1- phosphate (MTR-1-P) from methylthioadenosine (MTA) [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI47132622, Length=250, Percent_Identity=43.2, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI71980569, Length=285, Percent_Identity=40, Blast_Score=200, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6323045, Length=302, Percent_Identity=35.4304635761589, Blast_Score=191, Evalue=1e-49, Organism=Drosophila melanogaster, GI20130079, Length=249, Percent_Identity=40.9638554216867, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI221459247, Length=250, Percent_Identity=35.2, Blast_Score=165, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010044 - InterPro: IPR000845 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.28 [H]
Molecular weight: Translated: 30857; Mature: 30726
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANEVIGVIGGSGLYEMEGMTGVAQVTVDTPFGRPSDEYVTGTLDGVSMVFLPRHGKGHR CCCCEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCEEEEEECCEEEEEEECCCCCCC FTPSEVNYRANIYGMKKLGVTRIISVSAVGSLREEIVPGHIVIPDQFIDRTRGFRKDTFF CCCCCCCEEEEEEEEHHCCHHHEEHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCC GNGVVGHVQFADPVCAELSDLLHAAAVEVDAVVHRGGCYVCMEGPAFSTRAESHLYRSFG CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCHHHHHHHHHHC ASIIGMTNLTEAKLAREAEICYGVIALSTDYDCWHDAHADVSVEAIIAIIKNNVATAKKI CCEEECCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH IRQAVAKVAAGRGCGCGEALKYAIISDTSVIPVETRENLELIMGKYL HHHHHHHHHCCCCCCCHHHHEEEEECCCEEEEECCCCCHHHHHHCCC >Mature Secondary Structure ANEVIGVIGGSGLYEMEGMTGVAQVTVDTPFGRPSDEYVTGTLDGVSMVFLPRHGKGHR CCCEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCCEEEEEECCEEEEEEECCCCCCC FTPSEVNYRANIYGMKKLGVTRIISVSAVGSLREEIVPGHIVIPDQFIDRTRGFRKDTFF CCCCCCCEEEEEEEEHHCCHHHEEHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCC GNGVVGHVQFADPVCAELSDLLHAAAVEVDAVVHRGGCYVCMEGPAFSTRAESHLYRSFG CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCHHHHHHHHHHC ASIIGMTNLTEAKLAREAEICYGVIALSTDYDCWHDAHADVSVEAIIAIIKNNVATAKKI CCEEECCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH IRQAVAKVAAGRGCGCGEALKYAIISDTSVIPVETRENLELIMGKYL HHHHHHHHHCCCCCCCHHHHEEEEECCCEEEEECCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA