| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118036
Identifier: 197118036
GI number: 197118036
Start: 1914464
End: 1915132
Strand: Reverse
Name: 197118036
Synonym: Gbem_1649
Alternate gene names: NA
Gene position: 1915132-1914464 (Counterclockwise)
Preceding gene: 197118040
Following gene: 197118033
Centisome position: 41.5
GC content: 62.93
Gene sequence:
>669_bases ATGATAAAGGAAGCAATTACAGCGACCCTGATGCTTTCCCTGGGTGTTGCGGGGGTGTCCGAGGCAGGGGAAAACAACAA GCGGAGCAGCGGCAAGAAAACATCCGCGCCGGGATATACGGTCATCTCACCCATCTTCAGCCAGTTGGTCTCCTTCACCC TCCCCGCCGGGTTCACCACGGTCTGGGAAGACGGCAACAAAACCAGCTACCTGCGCGAGGCGGTGCCCACCGGCGAAACG GTGGAGAGCTGGACCCAGATGGTCACCGTCACCGGCGCCAAGGGGCTGGCCGGCAACCCCGACGTCACCCCGCGCAGCTT CGCCGGTGCCGTTGCCGGTGGGTTCGAGAAGTCGTGTCCGGATACATATAGCGGCAAGATCCTGAAGGAAGGGAAAAACG AGCGGGGTTACGACCACATCGTCGCGGTGGTGAGCTGCGGCGCTACCCCGGGGGGAAGCGGAATGTCCAGCGAATCGGCG CTGGTCGTGGTGATCAAGGGGGACAGGGACTATTACACCCTGCAATGGGCGGAGCGCGGATCTCCTTCGGGCAAGGCCAT CCCGGTGAACCCGCAGAAGTGGAAGGGACGCCTGGCGAAACTGGCCCCCATCAACCTCTCTCCCATAGTTCCGGGTGCCC CCCAGCCCTCCCCTTCGCGCTCTAAGTAG
Upstream 100 bases:
>100_bases GTGGAAGCTTTTTGCAATGAGGACTGGCTAACCCAATACAGGAGGCACGCAAAAAAACCGACAGCACCAACGAGCAGGAG CCCAAAAGGAGGTAGCAACG
Downstream 100 bases:
>100_bases AAAATCCTTCCTAAAGGCGCCGCATGCCGGGCGGCGCCGGCGATTCACCACGTCCATCTCGTTGCATCTCGTTCCCAAGG TCCACCTTGGGAACGCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MIKEAITATLMLSLGVAGVSEAGENNKRSSGKKTSAPGYTVISPIFSQLVSFTLPAGFTTVWEDGNKTSYLREAVPTGET VESWTQMVTVTGAKGLAGNPDVTPRSFAGAVAGGFEKSCPDTYSGKILKEGKNERGYDHIVAVVSCGATPGGSGMSSESA LVVVIKGDRDYYTLQWAERGSPSGKAIPVNPQKWKGRLAKLAPINLSPIVPGAPQPSPSRSK
Sequences:
>Translated_222_residues MIKEAITATLMLSLGVAGVSEAGENNKRSSGKKTSAPGYTVISPIFSQLVSFTLPAGFTTVWEDGNKTSYLREAVPTGET VESWTQMVTVTGAKGLAGNPDVTPRSFAGAVAGGFEKSCPDTYSGKILKEGKNERGYDHIVAVVSCGATPGGSGMSSESA LVVVIKGDRDYYTLQWAERGSPSGKAIPVNPQKWKGRLAKLAPINLSPIVPGAPQPSPSRSK >Mature_222_residues MIKEAITATLMLSLGVAGVSEAGENNKRSSGKKTSAPGYTVISPIFSQLVSFTLPAGFTTVWEDGNKTSYLREAVPTGET VESWTQMVTVTGAKGLAGNPDVTPRSFAGAVAGGFEKSCPDTYSGKILKEGKNERGYDHIVAVVSCGATPGGSGMSSESA LVVVIKGDRDYYTLQWAERGSPSGKAIPVNPQKWKGRLAKLAPINLSPIVPGAPQPSPSRSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23176; Mature: 23176
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKEAITATLMLSLGVAGVSEAGENNKRSSGKKTSAPGYTVISPIFSQLVSFTLPAGFTT CCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEE VWEDGNKTSYLREAVPTGETVESWTQMVTVTGAKGLAGNPDVTPRSFAGAVAGGFEKSCP EEECCCCHHHHHHHCCCCHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCC DTYSGKILKEGKNERGYDHIVAVVSCGATPGGSGMSSESALVVVIKGDRDYYTLQWAERG CCCCCHHEECCCCCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCC SPSGKAIPVNPQKWKGRLAKLAPINLSPIVPGAPQPSPSRSK CCCCCEECCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIKEAITATLMLSLGVAGVSEAGENNKRSSGKKTSAPGYTVISPIFSQLVSFTLPAGFTT CCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEE VWEDGNKTSYLREAVPTGETVESWTQMVTVTGAKGLAGNPDVTPRSFAGAVAGGFEKSCP EEECCCCHHHHHHHCCCCHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCC DTYSGKILKEGKNERGYDHIVAVVSCGATPGGSGMSSESALVVVIKGDRDYYTLQWAERG CCCCCHHEECCCCCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCC SPSGKAIPVNPQKWKGRLAKLAPINLSPIVPGAPQPSPSRSK CCCCCEECCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA