Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118036

Identifier: 197118036

GI number: 197118036

Start: 1914464

End: 1915132

Strand: Reverse

Name: 197118036

Synonym: Gbem_1649

Alternate gene names: NA

Gene position: 1915132-1914464 (Counterclockwise)

Preceding gene: 197118040

Following gene: 197118033

Centisome position: 41.5

GC content: 62.93

Gene sequence:

>669_bases
ATGATAAAGGAAGCAATTACAGCGACCCTGATGCTTTCCCTGGGTGTTGCGGGGGTGTCCGAGGCAGGGGAAAACAACAA
GCGGAGCAGCGGCAAGAAAACATCCGCGCCGGGATATACGGTCATCTCACCCATCTTCAGCCAGTTGGTCTCCTTCACCC
TCCCCGCCGGGTTCACCACGGTCTGGGAAGACGGCAACAAAACCAGCTACCTGCGCGAGGCGGTGCCCACCGGCGAAACG
GTGGAGAGCTGGACCCAGATGGTCACCGTCACCGGCGCCAAGGGGCTGGCCGGCAACCCCGACGTCACCCCGCGCAGCTT
CGCCGGTGCCGTTGCCGGTGGGTTCGAGAAGTCGTGTCCGGATACATATAGCGGCAAGATCCTGAAGGAAGGGAAAAACG
AGCGGGGTTACGACCACATCGTCGCGGTGGTGAGCTGCGGCGCTACCCCGGGGGGAAGCGGAATGTCCAGCGAATCGGCG
CTGGTCGTGGTGATCAAGGGGGACAGGGACTATTACACCCTGCAATGGGCGGAGCGCGGATCTCCTTCGGGCAAGGCCAT
CCCGGTGAACCCGCAGAAGTGGAAGGGACGCCTGGCGAAACTGGCCCCCATCAACCTCTCTCCCATAGTTCCGGGTGCCC
CCCAGCCCTCCCCTTCGCGCTCTAAGTAG

Upstream 100 bases:

>100_bases
GTGGAAGCTTTTTGCAATGAGGACTGGCTAACCCAATACAGGAGGCACGCAAAAAAACCGACAGCACCAACGAGCAGGAG
CCCAAAAGGAGGTAGCAACG

Downstream 100 bases:

>100_bases
AAAATCCTTCCTAAAGGCGCCGCATGCCGGGCGGCGCCGGCGATTCACCACGTCCATCTCGTTGCATCTCGTTCCCAAGG
TCCACCTTGGGAACGCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MIKEAITATLMLSLGVAGVSEAGENNKRSSGKKTSAPGYTVISPIFSQLVSFTLPAGFTTVWEDGNKTSYLREAVPTGET
VESWTQMVTVTGAKGLAGNPDVTPRSFAGAVAGGFEKSCPDTYSGKILKEGKNERGYDHIVAVVSCGATPGGSGMSSESA
LVVVIKGDRDYYTLQWAERGSPSGKAIPVNPQKWKGRLAKLAPINLSPIVPGAPQPSPSRSK

Sequences:

>Translated_222_residues
MIKEAITATLMLSLGVAGVSEAGENNKRSSGKKTSAPGYTVISPIFSQLVSFTLPAGFTTVWEDGNKTSYLREAVPTGET
VESWTQMVTVTGAKGLAGNPDVTPRSFAGAVAGGFEKSCPDTYSGKILKEGKNERGYDHIVAVVSCGATPGGSGMSSESA
LVVVIKGDRDYYTLQWAERGSPSGKAIPVNPQKWKGRLAKLAPINLSPIVPGAPQPSPSRSK
>Mature_222_residues
MIKEAITATLMLSLGVAGVSEAGENNKRSSGKKTSAPGYTVISPIFSQLVSFTLPAGFTTVWEDGNKTSYLREAVPTGET
VESWTQMVTVTGAKGLAGNPDVTPRSFAGAVAGGFEKSCPDTYSGKILKEGKNERGYDHIVAVVSCGATPGGSGMSSESA
LVVVIKGDRDYYTLQWAERGSPSGKAIPVNPQKWKGRLAKLAPINLSPIVPGAPQPSPSRSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23176; Mature: 23176

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKEAITATLMLSLGVAGVSEAGENNKRSSGKKTSAPGYTVISPIFSQLVSFTLPAGFTT
CCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEE
VWEDGNKTSYLREAVPTGETVESWTQMVTVTGAKGLAGNPDVTPRSFAGAVAGGFEKSCP
EEECCCCHHHHHHHCCCCHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCC
DTYSGKILKEGKNERGYDHIVAVVSCGATPGGSGMSSESALVVVIKGDRDYYTLQWAERG
CCCCCHHEECCCCCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCC
SPSGKAIPVNPQKWKGRLAKLAPINLSPIVPGAPQPSPSRSK
CCCCCEECCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIKEAITATLMLSLGVAGVSEAGENNKRSSGKKTSAPGYTVISPIFSQLVSFTLPAGFTT
CCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEE
VWEDGNKTSYLREAVPTGETVESWTQMVTVTGAKGLAGNPDVTPRSFAGAVAGGFEKSCP
EEECCCCHHHHHHHCCCCHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCC
DTYSGKILKEGKNERGYDHIVAVVSCGATPGGSGMSSESALVVVIKGDRDYYTLQWAERG
CCCCCHHEECCCCCCCHHHEEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCC
SPSGKAIPVNPQKWKGRLAKLAPINLSPIVPGAPQPSPSRSK
CCCCCEECCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA