| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is wecB-2 [H]
Identifier: 197118010
GI number: 197118010
Start: 1883291
End: 1884427
Strand: Direct
Name: wecB-2 [H]
Synonym: Gbem_1623
Alternate gene names: 197118010
Gene position: 1883291-1884427 (Clockwise)
Preceding gene: 197118009
Following gene: 197118011
Centisome position: 40.81
GC content: 58.14
Gene sequence:
>1137_bases ATGAAAAAGATCAGAGTAATGACGGTCGTCGGCACGAGGCCTGAGATCATACGCCTTTCCCGCGTTATGGCGAAGCTGGA CCAGCATGCCGATCACATATTGGTGCACACCGGGCAAAACTATGACTATGAGCTGAACGAGATCTTCTTTCACGACTTGG GTGTCAGAAAGCCTGACCATTTCCTGGATGCGGCCGGTGCCAACGCCGCGGAGACTATCGGTCAGCTGATCATAAAGGTG GACCAGGTACTAGAGAAGGAGAAGCCTGAAGCGCTCCTGGTCCTCGGGGACACGAACAGCTGCCTCGCCGCGCTGCCGGC CAAGCGGCGCAAGATCCCGATCTTTCACATGGAGGCGGGCAACCGCTGCTTTGATCAGAGGGTGCCGGAGGAGACCAACC GCAAGATAGTTGACCACATCTCCGACATCAATATGACTTACAGCTCTATAGCGCGCGAGTACCTTTTGCGCGAGGGACTG CCGCCGGACCGGATCATCAAAACCGGGAGCCCGATGTTCGAGGTGCTGAATTCCTACATGCAAAAGATTGATGCCTCCGA CGTTCTCACCCGGCTGGGACTTGCTCGCGGCGACTACTTCGTGGTCAGCGCCCACCGCGAAGAGAACGTTGATTCTGAGG TGAACCTCGTCAAATTGGCTGCCATCCTGAACGGCATTGCCGAGCGCTACGGGAAAAGGGTTATAGTCTCTACCCATCCC AGGACCCGCAAACGTTTCGAGGAGAAGGGGCTTTCCTTCCACGAGAAGGTGGAGCTCCTGAAGCCGCTCGGCTTCTCGGA CTACGTCCACCTGCAAAAGCACGCCTTCGCCGTCCTCTCTGACAGCGGCACCATCACTGAGGAGTCATCCATCCTCAATT TCCCGGCTCTGAATATTCGCGAGGCGCACGAGCGCCCCGAGGGGATGGAGGAGGCATCGGTGATGATGACCGGGCTGGAA CCGGACCGGGTGCTGCAGGGGCTGGAGATCCTGCAGAGCCAGGAGCGGGGTGAGGTCAGAAGCCTGCGCCCGGTGTTCGA CTACTCCATGCCCAACGTGTCCGACAAGGTGTTGCGCATCATCATCAGCTACACCGACTACGTGAACCGGGTGGTGTGGC GCAAGGAGCTGAAGTAA
Upstream 100 bases:
>100_bases GCAACATCGGCGCCAACGAAATGGTGACCGTGATGTGGTGCAACGAGCTGTTCGACCCGGAGCGGCCCGATACTTATTTC GAAACTGTGGAGTGTGGTGC
Downstream 100 bases:
>100_bases CGAACGGGTGAGATGCGCATGCATGTATTGGTAGTGACACAGTATTTTTGGCCTGAAAACTTCAAAATCAACGATGTTGT AAAAGGGCTTGTCGAACGTG
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKKIRVMTVVGTRPEIIRLSRVMAKLDQHADHILVHTGQNYDYELNEIFFHDLGVRKPDHFLDAAGANAAETIGQLIIKV DQVLEKEKPEALLVLGDTNSCLAALPAKRRKIPIFHMEAGNRCFDQRVPEETNRKIVDHISDINMTYSSIAREYLLREGL PPDRIIKTGSPMFEVLNSYMQKIDASDVLTRLGLARGDYFVVSAHREENVDSEVNLVKLAAILNGIAERYGKRVIVSTHP RTRKRFEEKGLSFHEKVELLKPLGFSDYVHLQKHAFAVLSDSGTITEESSILNFPALNIREAHERPEGMEEASVMMTGLE PDRVLQGLEILQSQERGEVRSLRPVFDYSMPNVSDKVLRIIISYTDYVNRVVWRKELK
Sequences:
>Translated_378_residues MKKIRVMTVVGTRPEIIRLSRVMAKLDQHADHILVHTGQNYDYELNEIFFHDLGVRKPDHFLDAAGANAAETIGQLIIKV DQVLEKEKPEALLVLGDTNSCLAALPAKRRKIPIFHMEAGNRCFDQRVPEETNRKIVDHISDINMTYSSIAREYLLREGL PPDRIIKTGSPMFEVLNSYMQKIDASDVLTRLGLARGDYFVVSAHREENVDSEVNLVKLAAILNGIAERYGKRVIVSTHP RTRKRFEEKGLSFHEKVELLKPLGFSDYVHLQKHAFAVLSDSGTITEESSILNFPALNIREAHERPEGMEEASVMMTGLE PDRVLQGLEILQSQERGEVRSLRPVFDYSMPNVSDKVLRIIISYTDYVNRVVWRKELK >Mature_378_residues MKKIRVMTVVGTRPEIIRLSRVMAKLDQHADHILVHTGQNYDYELNEIFFHDLGVRKPDHFLDAAGANAAETIGQLIIKV DQVLEKEKPEALLVLGDTNSCLAALPAKRRKIPIFHMEAGNRCFDQRVPEETNRKIVDHISDINMTYSSIAREYLLREGL PPDRIIKTGSPMFEVLNSYMQKIDASDVLTRLGLARGDYFVVSAHREENVDSEVNLVKLAAILNGIAERYGKRVIVSTHP RTRKRFEEKGLSFHEKVELLKPLGFSDYVHLQKHAFAVLSDSGTITEESSILNFPALNIREAHERPEGMEEASVMMTGLE PDRVLQGLEILQSQERGEVRSLRPVFDYSMPNVSDKVLRIIISYTDYVNRVVWRKELK
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) to produce UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=345, Percent_Identity=28.1159420289855, Blast_Score=103, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 43084; Mature: 43084
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIRVMTVVGTRPEIIRLSRVMAKLDQHADHILVHTGQNYDYELNEIFFHDLGVRKPDH CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCHH FLDAAGANAAETIGQLIIKVDQVLEKEKPEALLVLGDTNSCLAALPAKRRKIPIFHMEAG HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCCEEEECCC NRCFDQRVPEETNRKIVDHISDINMTYSSIAREYLLREGLPPDRIIKTGSPMFEVLNSYM CHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHH QKIDASDVLTRLGLARGDYFVVSAHREENVDSEVNLVKLAAILNGIAERYGKRVIVSTHP HHCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCC RTRKRFEEKGLSFHEKVELLKPLGFSDYVHLQKHAFAVLSDSGTITEESSILNFPALNIR HHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCHH EAHERPEGMEEASVMMTGLEPDRVLQGLEILQSQERGEVRSLRPVFDYSMPNVSDKVLRI HHHCCCCCHHHHHHHEECCCHHHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCHHHHHHHH IISYTDYVNRVVWRKELK HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKIRVMTVVGTRPEIIRLSRVMAKLDQHADHILVHTGQNYDYELNEIFFHDLGVRKPDH CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCHH FLDAAGANAAETIGQLIIKVDQVLEKEKPEALLVLGDTNSCLAALPAKRRKIPIFHMEAG HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCCEEEECCC NRCFDQRVPEETNRKIVDHISDINMTYSSIAREYLLREGLPPDRIIKTGSPMFEVLNSYM CHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHH QKIDASDVLTRLGLARGDYFVVSAHREENVDSEVNLVKLAAILNGIAERYGKRVIVSTHP HHCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCC RTRKRFEEKGLSFHEKVELLKPLGFSDYVHLQKHAFAVLSDSGTITEESSILNFPALNIR HHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCHH EAHERPEGMEEASVMMTGLEPDRVLQGLEILQSQERGEVRSLRPVFDYSMPNVSDKVLRI HHHCCCCCHHHHHHHEECCCHHHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCHHHHHHHH IISYTDYVNRVVWRKELK HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]