Click here to switch to the map view.

The map label for this gene is 197118009

Identifier: 197118009

GI number: 197118009

Start: 1882170

End: 1883294

Strand: Direct

Name: 197118009

Synonym: Gbem_1622

Alternate gene names: NA

Gene position: 1882170-1883294 (Clockwise)

Preceding gene: 197118008

Following gene: 197118010

Centisome position: 40.78

GC content: 60.09

Gene sequence:

>1125_bases
ATGAGGAAGGTCCTCATCACCGGATCGAATGGCTTCATCGGCAAGAACCTCGCGGCTTCCCTGGCACACCTGGAGGGAGT
CGAGGTTCACGGGGTTGATGTGGAGTGCGAGCAGGAGAGCCTCACCGAGCTGGTTGTCGAAGCCGACTTCATCTTCCATC
TCGCCGGAGTAAACCGCCCGCAGCAGGTGGAGGAGTTCGCCATCGGAAACACCGGCAGCACCGAGGGTGTGGTAGCCATC
CTGAAGAGACACGGCAGGAAAACACCGCTTCTCATCTCATCCTCCATCCAAGCGGCGCAGGACAACCCCTACGGCGTCAG
CAAGCGCCGCGCGGAGGAGGTGGTCGCAGCCTACGGCCGCGACACCGGGGCCCGCGTGTACCTGTACCGGCTCCCTAACG
TCTTCGGGAAGTGGTGCCGCCCCAACTACAACAGCGCGGTCGCCACCTTCTGCCACAACATCGCGAACGACCTCCCCATT
CAGGTCAACGACCCGTCGGTAGTCATGAATCTCGTCTACGTGGACGATGTGGTGCGCGCCTTTGCCGCAGACCTGAACGG
CCGTCTTCCGGCAGCGGAGGGGTTTTGCAAGGTGGAGCCGGTCCATACGGCGCAACTCGGCGAAATCGCCGATATGATCG
GTTCGTTCAAGCGGAGCCGTGAGGAAAGGAGCATCCCCAACCTCGCCGACCAGCTGTCAAAGAAGCTCTACAGCACCTAC
CTGAGCTTCTTGCCTACCGATCGCTTCAGCTATCCGTTGAAGATGAATGTCGATGACCGGGGCTCCTTCACCGAATTCAT
CAAAACCGCGGACAGGGGACAGGTCTCGGTCAATATCTCCAGGCCGGGGATTACCAAGGGGAACCACTGGCACCACACCA
AGAACGAGAAGTTCCTGGTTGTGAGCGGCGAAGGGGTGATCCGCTTCCGCAAGGTCGGCACCGAAGAGATCATCGAGTAC
CCGGTGAGCGGGGCCAAGCTGGAGGTGGTCGACATCCCCACCGGTTACACTCACAACATCAGCAACATCGGCGCCAACGA
AATGGTGACCGTGATGTGGTGCAACGAGCTGTTCGACCCGGAGCGGCCCGATACTTATTTCGAAACTGTGGAGTGTGGTG
CATGA

Upstream 100 bases:

>100_bases
ACGACTACAACTCCCACAACACCCAGAGGTTGTCCGTGGCAGAGATCAAGGAAAAGCTCTTGAAGCTCGACTACATTCGC
GGCGAACTGGAGGGGAGGGC

Downstream 100 bases:

>100_bases
AAAAGATCAGAGTAATGACGGTCGTCGGCACGAGGCCTGAGATCATACGCCTTTCCCGCGTTATGGCGAAGCTGGACCAG
CATGCCGATCACATATTGGT

Product: NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase

Products: NA

Alternate protein names: Capsular Polysaccharide Biosynthesis K; Capsular Polysaccharide Synthesis; Capsular Polysaccharide Synthesis CapF; Capsular Polysaccharide Biosynthesis F; Nucleoside-Diphosphate-Sugar Epimerase; UDP-2-Acetamido-2 6-Dideoxy-Beta-L-Talose 4-Dehydrogenase; NAD Dependent Epimerase/Dehydratase; Nucleoside-Diphosphate-Sugar Epimerase WbjC; FnlB Protein Involved In UDP-L-FucpNAc Biosynthesis; Epimerase/Dehydratase; Capsular Polysaccharide Synthesis Cap5F; NAD Dependent Epimerase/Dehydratase Family

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MRKVLITGSNGFIGKNLAASLAHLEGVEVHGVDVECEQESLTELVVEADFIFHLAGVNRPQQVEEFAIGNTGSTEGVVAI
LKRHGRKTPLLISSSIQAAQDNPYGVSKRRAEEVVAAYGRDTGARVYLYRLPNVFGKWCRPNYNSAVATFCHNIANDLPI
QVNDPSVVMNLVYVDDVVRAFAADLNGRLPAAEGFCKVEPVHTAQLGEIADMIGSFKRSREERSIPNLADQLSKKLYSTY
LSFLPTDRFSYPLKMNVDDRGSFTEFIKTADRGQVSVNISRPGITKGNHWHHTKNEKFLVVSGEGVIRFRKVGTEEIIEY
PVSGAKLEVVDIPTGYTHNISNIGANEMVTVMWCNELFDPERPDTYFETVECGA

Sequences:

>Translated_374_residues
MRKVLITGSNGFIGKNLAASLAHLEGVEVHGVDVECEQESLTELVVEADFIFHLAGVNRPQQVEEFAIGNTGSTEGVVAI
LKRHGRKTPLLISSSIQAAQDNPYGVSKRRAEEVVAAYGRDTGARVYLYRLPNVFGKWCRPNYNSAVATFCHNIANDLPI
QVNDPSVVMNLVYVDDVVRAFAADLNGRLPAAEGFCKVEPVHTAQLGEIADMIGSFKRSREERSIPNLADQLSKKLYSTY
LSFLPTDRFSYPLKMNVDDRGSFTEFIKTADRGQVSVNISRPGITKGNHWHHTKNEKFLVVSGEGVIRFRKVGTEEIIEY
PVSGAKLEVVDIPTGYTHNISNIGANEMVTVMWCNELFDPERPDTYFETVECGA
>Mature_374_residues
MRKVLITGSNGFIGKNLAASLAHLEGVEVHGVDVECEQESLTELVVEADFIFHLAGVNRPQQVEEFAIGNTGSTEGVVAI
LKRHGRKTPLLISSSIQAAQDNPYGVSKRRAEEVVAAYGRDTGARVYLYRLPNVFGKWCRPNYNSAVATFCHNIANDLPI
QVNDPSVVMNLVYVDDVVRAFAADLNGRLPAAEGFCKVEPVHTAQLGEIADMIGSFKRSREERSIPNLADQLSKKLYSTY
LSFLPTDRFSYPLKMNVDDRGSFTEFIKTADRGQVSVNISRPGITKGNHWHHTKNEKFLVVSGEGVIRFRKVGTEEIIEY
PVSGAKLEVVDIPTGYTHNISNIGANEMVTVMWCNELFDPERPDTYFETVECGA

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41414; Mature: 41414

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVLITGSNGFIGKNLAASLAHLEGVEVHGVDVECEQESLTELVVEADFIFHLAGVNRP
CCEEEEECCCCCCCHHHHHHHHHHCCCEEECCCCEECHHHHHHHHHHHHHHEEECCCCCH
QQVEEFAIGNTGSTEGVVAILKRHGRKTPLLISSSIQAAQDNPYGVSKRRAEEVVAAYGR
HHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHCC
DTGARVYLYRLPNVFGKWCRPNYNSAVATFCHNIANDLPIQVNDPSVVMNLVYVDDVVRA
CCCCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCHHHEEEHHHHHHHHHH
FAADLNGRLPAAEGFCKVEPVHTAQLGEIADMIGSFKRSREERSIPNLADQLSKKLYSTY
HHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LSFLPTDRFSYPLKMNVDDRGSFTEFIKTADRGQVSVNISRPGITKGNHWHHTKNEKFLV
HHHCCCCCCCCCEEECCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEE
VSGEGVIRFRKVGTEEIIEYPVSGAKLEVVDIPTGYTHNISNIGANEMVTVMWCNELFDP
EECCCEEEEECCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHHCCC
ERPDTYFETVECGA
CCCCHHHHEEECCC
>Mature Secondary Structure
MRKVLITGSNGFIGKNLAASLAHLEGVEVHGVDVECEQESLTELVVEADFIFHLAGVNRP
CCEEEEECCCCCCCHHHHHHHHHHCCCEEECCCCEECHHHHHHHHHHHHHHEEECCCCCH
QQVEEFAIGNTGSTEGVVAILKRHGRKTPLLISSSIQAAQDNPYGVSKRRAEEVVAAYGR
HHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHCCCCCCCCHHHHHHHHHHHHCC
DTGARVYLYRLPNVFGKWCRPNYNSAVATFCHNIANDLPIQVNDPSVVMNLVYVDDVVRA
CCCCEEEEEECCHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCHHHEEEHHHHHHHHHH
FAADLNGRLPAAEGFCKVEPVHTAQLGEIADMIGSFKRSREERSIPNLADQLSKKLYSTY
HHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LSFLPTDRFSYPLKMNVDDRGSFTEFIKTADRGQVSVNISRPGITKGNHWHHTKNEKFLV
HHHCCCCCCCCCEEECCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEE
VSGEGVIRFRKVGTEEIIEYPVSGAKLEVVDIPTGYTHNISNIGANEMVTVMWCNELFDP
EECCCEEEEECCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHHCCC
ERPDTYFETVECGA
CCCCHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA