| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is feoB-1 [C]
Identifier: 197117975
GI number: 197117975
Start: 1841339
End: 1843330
Strand: Direct
Name: feoB-1 [C]
Synonym: Gbem_1588
Alternate gene names: 197117975
Gene position: 1841339-1843330 (Clockwise)
Preceding gene: 197117974
Following gene: 197117976
Centisome position: 39.9
GC content: 61.7
Gene sequence:
>1992_bases ATGTCATTTTTCAAGAAGAAGGGTTCCTGCCACGAAGCCGCAACCGTTGCCGCCAGCGGCGCCAAGAAGGTGGCGCTGGT GGGGAATCCCAACGTCGGAAAGAGCGTTCTCTTCAATGCCCTCACGGGCGCCTACGTCACCGTATCCAACTATCCCGGCA CCTCGGTTGAGGTTTCCCGCGGCAGCACGGCGATCAATGGGGAAGAATTCGAGATCATCGACACACCAGGCATGTACTCC ATACTCCCGATCACAGAGGAGGAGCGGGTGGCCCGCGAGATCCTCTTGACCGAGCGCCCGCACCTCGTGCTCCACGTCCT TGACGCCCGCAACCTGGAGCGGATGCTCCCGATGACGCTGCAGCTCATCGAGGCGGAGCTTCCCGTGGTGCTGGTGGTGA ACATCATGGACGAGGCCGCGCGCATGGGGCTGGAGATCGACATCCCGCTTTTGTCCCAGCGGCTCGGCATCCCGGTCATC GGCGCCGCTACCGCTAAGAAGATCGGTGTTCCCGAGATCAAATCCGCCATTGCCGGCAGCTCCTCCGGCGCCGTCCCCCC CTTCACCTACTCGCGTCTGATGGAGGGTGACATCGCCGAGATCTGCCAGAGCCTCAGGGGCGAGTACATCCTCTCCAAGA AGGCGATCGCGCTTCTGCTTTTGCAGGACGACACCGAGGTAGCCGAATTGGTACGGGAAACCGAGGGCGTATGGTTTCCT GCCCTCCAGACGGTGGTTCGTGACAAGCGCTTCGAGCGCCGCGAGTCGTTCCATCTCGACCTCTCCATGGAGCGCAAGGC GATAGTGAAGAAGATCCTGGACGGCGCCTTCAAGATCCCGGAGAAGCGCGTGGTCACGCTCGCCGAGCGATTCTCACGCT GGACTGTGCGCCCGACTACCGGCATCCCGCTGCTGCTCATCGTGCTTTACTTCGGCCTCTACCAGTTCGTCGGCGTCTTC GGCGCCGGGACGCTGGTCGATTTCCTCGAAGGGAAGGGATTCGAGCAGTACTTCAACCCCTGGATCACCGAGGTCGTTAA ACTCAACGTCCCGTGGGAGATGATCCAGGAACTCCTGGTGGGCGAGTACGGCATCATCACCCTGGGCTTCCGCTACGCCG TCGGCATCATCCTCCCCATCGTCGCCACCTTCTTCCTCTTCTTCTCCGTGCTCGAGGACAGCGGCTATTTTCCGCGGCTT GCGCTCCTGGTGGACCGGGTGTTCAAGACCATGGGACTCACCGGCCGGGCGGTGATACCGATGGTGTTAGGCTTTGGCTG CGACACCATGGCGACCATGGTGACGAGGACCCTGGAGACGGTTCGCGAGCGGGTCATCGCCACGGTGCTCTTGGCGCTCG CCATACCCTGTTCGGCGCAGTTGGGGGTCATCATGTCGCTTCTCTCCCAGACTCCCGGAGCGCTTTTGGCCTGGGGCGTC TGCCTGACCCTGATATTCCTGCTGGTCGGCCTTCTGGCCGCCAAGGTGCTCCCGGGGGAGACACCGATGTTCTACATGGA GATCCCCCCGATGCGGTTGCCGCAGTTCGGCAACGTGCTGACCAAGACCTACACCAGGATGCAGTGGTACTTCATGGAGA TCCTGCCGCTGTTCATCCTCGCCTCCGTGCTTTTGTGGCTCGGTAAGATCACCCATTTCTTCGAGAAGATGATCGAGGCG ATGACACCGGTCATGGCCGCCTTGGGGCTCCCCAAGGAGTCGGCCGTCGCTTTCATCTTCGGGTTCTTCCGGCGCGATTA CGGCGCGGCAGGGCTTTACGACCTGCAGGCCAAGGGGCTTTTGAACCCCCGGCAACTCACCGTGGCGGCGGTTACCCTCA CCCTGTTCATCCCCTGCGTGGCGCAGTTTCTGATCATGAAGAAGGAGCGCGGCTGGAATGTGGCCATCGCCATCGGGCTC TTCGTCTCCGTCTTCGCCTTCGGCAGCGGGTGGCTCTTGAACCGTTTCCTGCTTGCCACGCAATTGCTGTAA
Upstream 100 bases:
>100_bases CCCGCACCAAAAGCTATAAAAAATTTTTCCCGCCATCATGAAAGTGATATTCATCGACTTTTAATTGGCATTCAAACGTT AAAGAGGGGTAGTGGAAAAC
Downstream 100 bases:
>100_bases ACCAGTTGACGACGAAAACCTTTGTGAACCAATTGACAATGGACAATTGACAATTGACAACTAAAATCCAATGACTGACT CAAATGCACCCTAAAGTGCG
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 663; Mature: 662
Protein sequence:
>663_residues MSFFKKKGSCHEAATVAASGAKKVALVGNPNVGKSVLFNALTGAYVTVSNYPGTSVEVSRGSTAINGEEFEIIDTPGMYS ILPITEEERVAREILLTERPHLVLHVLDARNLERMLPMTLQLIEAELPVVLVVNIMDEAARMGLEIDIPLLSQRLGIPVI GAATAKKIGVPEIKSAIAGSSSGAVPPFTYSRLMEGDIAEICQSLRGEYILSKKAIALLLLQDDTEVAELVRETEGVWFP ALQTVVRDKRFERRESFHLDLSMERKAIVKKILDGAFKIPEKRVVTLAERFSRWTVRPTTGIPLLLIVLYFGLYQFVGVF GAGTLVDFLEGKGFEQYFNPWITEVVKLNVPWEMIQELLVGEYGIITLGFRYAVGIILPIVATFFLFFSVLEDSGYFPRL ALLVDRVFKTMGLTGRAVIPMVLGFGCDTMATMVTRTLETVRERVIATVLLALAIPCSAQLGVIMSLLSQTPGALLAWGV CLTLIFLLVGLLAAKVLPGETPMFYMEIPPMRLPQFGNVLTKTYTRMQWYFMEILPLFILASVLLWLGKITHFFEKMIEA MTPVMAALGLPKESAVAFIFGFFRRDYGAAGLYDLQAKGLLNPRQLTVAAVTLTLFIPCVAQFLIMKKERGWNVAIAIGL FVSVFAFGSGWLLNRFLLATQLL
Sequences:
>Translated_663_residues MSFFKKKGSCHEAATVAASGAKKVALVGNPNVGKSVLFNALTGAYVTVSNYPGTSVEVSRGSTAINGEEFEIIDTPGMYS ILPITEEERVAREILLTERPHLVLHVLDARNLERMLPMTLQLIEAELPVVLVVNIMDEAARMGLEIDIPLLSQRLGIPVI GAATAKKIGVPEIKSAIAGSSSGAVPPFTYSRLMEGDIAEICQSLRGEYILSKKAIALLLLQDDTEVAELVRETEGVWFP ALQTVVRDKRFERRESFHLDLSMERKAIVKKILDGAFKIPEKRVVTLAERFSRWTVRPTTGIPLLLIVLYFGLYQFVGVF GAGTLVDFLEGKGFEQYFNPWITEVVKLNVPWEMIQELLVGEYGIITLGFRYAVGIILPIVATFFLFFSVLEDSGYFPRL ALLVDRVFKTMGLTGRAVIPMVLGFGCDTMATMVTRTLETVRERVIATVLLALAIPCSAQLGVIMSLLSQTPGALLAWGV CLTLIFLLVGLLAAKVLPGETPMFYMEIPPMRLPQFGNVLTKTYTRMQWYFMEILPLFILASVLLWLGKITHFFEKMIEA MTPVMAALGLPKESAVAFIFGFFRRDYGAAGLYDLQAKGLLNPRQLTVAAVTLTLFIPCVAQFLIMKKERGWNVAIAIGL FVSVFAFGSGWLLNRFLLATQLL >Mature_662_residues SFFKKKGSCHEAATVAASGAKKVALVGNPNVGKSVLFNALTGAYVTVSNYPGTSVEVSRGSTAINGEEFEIIDTPGMYSI LPITEEERVAREILLTERPHLVLHVLDARNLERMLPMTLQLIEAELPVVLVVNIMDEAARMGLEIDIPLLSQRLGIPVIG AATAKKIGVPEIKSAIAGSSSGAVPPFTYSRLMEGDIAEICQSLRGEYILSKKAIALLLLQDDTEVAELVRETEGVWFPA LQTVVRDKRFERRESFHLDLSMERKAIVKKILDGAFKIPEKRVVTLAERFSRWTVRPTTGIPLLLIVLYFGLYQFVGVFG AGTLVDFLEGKGFEQYFNPWITEVVKLNVPWEMIQELLVGEYGIITLGFRYAVGIILPIVATFFLFFSVLEDSGYFPRLA LLVDRVFKTMGLTGRAVIPMVLGFGCDTMATMVTRTLETVRERVIATVLLALAIPCSAQLGVIMSLLSQTPGALLAWGVC LTLIFLLVGLLAAKVLPGETPMFYMEIPPMRLPQFGNVLTKTYTRMQWYFMEILPLFILASVLLWLGKITHFFEKMIEAM TPVMAALGLPKESAVAFIFGFFRRDYGAAGLYDLQAKGLLNPRQLTVAAVTLTLFIPCVAQFLIMKKERGWNVAIAIGLF VSVFAFGSGWLLNRFLLATQLL
Specific function: Probable GTP-driven transporter of Fe(2+) ion [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=565, Percent_Identity=26.7256637168142, Blast_Score=184, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 73289; Mature: 73158
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFKKKGSCHEAATVAASGAKKVALVGNPNVGKSVLFNALTGAYVTVSNYPGTSVEVSR CCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCEEEECC GSTAINGEEFEIIDTPGMYSILPITEEERVAREILLTERPHLVLHVLDARNLERMLPMTL CCCEECCCCEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEECCHHCHHHHHHHHH QLIEAELPVVLVVNIMDEAARMGLEIDIPLLSQRLGIPVIGAATAKKIGVPEIKSAIAGS HHHHHCCCEEEEHHHHHHHHHCCCEECCHHHHHHCCCCEEECCHHHHCCCHHHHHHHCCC SSGAVPPFTYSRLMEGDIAEICQSLRGEYILSKKAIALLLLQDDTEVAELVRETEGVWFP CCCCCCCHHHHHHHCCCHHHHHHHHCCCEEECCCCEEEEEEECCHHHHHHHHHHCCCCHH ALQTVVRDKRFERRESFHLDLSMERKAIVKKILDGAFKIPEKRVVTLAERFSRWTVRPTT HHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC GIPLLLIVLYFGLYQFVGVFGAGTLVDFLEGKGFEQYFNPWITEVVKLNVPWEMIQELLV CHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCHHHHHHHCCCCCHHHHHHHHC GEYGIITLGFRYAVGIILPIVATFFLFFSVLEDSGYFPRLALLVDRVFKTMGLTGRAVIP CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH MVLGFGCDTMATMVTRTLETVRERVIATVLLALAIPCSAQLGVIMSLLSQTPGALLAWGV HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHH CLTLIFLLVGLLAAKVLPGETPMFYMEIPPMRLPQFGNVLTKTYTRMQWYFMEILPLFIL HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ASVLLWLGKITHFFEKMIEAMTPVMAALGLPKESAVAFIFGFFRRDYGAAGLYDLQAKGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCC LNPRQLTVAAVTLTLFIPCVAQFLIMKKERGWNVAIAIGLFVSVFAFGSGWLLNRFLLAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHH QLL HCC >Mature Secondary Structure SFFKKKGSCHEAATVAASGAKKVALVGNPNVGKSVLFNALTGAYVTVSNYPGTSVEVSR CCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCEEEECC GSTAINGEEFEIIDTPGMYSILPITEEERVAREILLTERPHLVLHVLDARNLERMLPMTL CCCEECCCCEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEECCHHCHHHHHHHHH QLIEAELPVVLVVNIMDEAARMGLEIDIPLLSQRLGIPVIGAATAKKIGVPEIKSAIAGS HHHHHCCCEEEEHHHHHHHHHCCCEECCHHHHHHCCCCEEECCHHHHCCCHHHHHHHCCC SSGAVPPFTYSRLMEGDIAEICQSLRGEYILSKKAIALLLLQDDTEVAELVRETEGVWFP CCCCCCCHHHHHHHCCCHHHHHHHHCCCEEECCCCEEEEEEECCHHHHHHHHHHCCCCHH ALQTVVRDKRFERRESFHLDLSMERKAIVKKILDGAFKIPEKRVVTLAERFSRWTVRPTT HHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC GIPLLLIVLYFGLYQFVGVFGAGTLVDFLEGKGFEQYFNPWITEVVKLNVPWEMIQELLV CHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHCHHHHHHHCCCCCHHHHHHHHC GEYGIITLGFRYAVGIILPIVATFFLFFSVLEDSGYFPRLALLVDRVFKTMGLTGRAVIP CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH MVLGFGCDTMATMVTRTLETVRERVIATVLLALAIPCSAQLGVIMSLLSQTPGALLAWGV HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHH CLTLIFLLVGLLAAKVLPGETPMFYMEIPPMRLPQFGNVLTKTYTRMQWYFMEILPLFIL HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ASVLLWLGKITHFFEKMIEAMTPVMAALGLPKESAVAFIFGFFRRDYGAAGLYDLQAKGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCC LNPRQLTVAAVTLTLFIPCVAQFLIMKKERGWNVAIAIGLFVSVFAFGSGWLLNRFLLAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHH QLL HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]