| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197117969
Identifier: 197117969
GI number: 197117969
Start: 1834723
End: 1835787
Strand: Direct
Name: 197117969
Synonym: Gbem_1582
Alternate gene names: NA
Gene position: 1834723-1835787 (Clockwise)
Preceding gene: 197117966
Following gene: 197117970
Centisome position: 39.75
GC content: 63.66
Gene sequence:
>1065_bases ATGGATACCTTTTTCGCCTCGCCCGAACCCCAAATCTGCCGCCAACTCAGTGAAGCGAGCCGAGGCCGAGGCCCTAGAAT CGTGCGGCCGTCGGCCGCTGCGGACCCGGTGCAGGATTTCGCGCGCTCGGCCGCGGCAGGGCTCGCGTCTCCGCCGCGCC GCTTGGAGAGCAGGTTCCTGTACGATGCGCAGGGGAGCATCCTCTTCGACCAGATCACCGCGCAGCCGGAATACTACCTT ACCCGTACCGAGGCCTCGATCCTCGCGGCCAACGCCGCCCGCATCAGGGCCCTCACCGGACCGACGAACATAATGGAGCT TGGGGCCGGCAGCGCGGCGAAGACGGATAATCTTTTGAGAGCCTGGCTGGAGCGCTCCAAGGCGGTCTGCTATTTTCCGG TGGATGTGAGCCTGACCGCGCTCCTGGGGGCCTGCAAAAGCATCTCGGCGAGGTTTCCTGCTGCCCGCGTCATCGCGGTG AACAGCGAGTACGCTGAAGCGTTCCCGCTTCTTTCGCAGCTCTCCCCTGTGCTGGTGACCTTCCTGGGGAGCAGCATCGG CAACTTCAGCCGGCTCGAGATGACTAGCTTCTGCCTCGCCCTGGCGGCGTCGATGCGACCGGGCGACTTCTTACTCCTGG GCCTGGACCTGGTGAAGAGAAGTTCGGTCTTGGAGGCGGCCTACAACGACAGGGCTGGAGTAACGGAGCGTTTTACCCGC AACATCTTCGCCCGGATGAACCGCGAACTTGGCAGTGCCATAGACCTCGAGTCCATCGAGCATTCGGCGCGTTACCAGGC GGAGCTGGAGCAGATCGAGATCGACGCCTGTTTCACGAAGCGGCAGGCTTTCCTCCTTCAACCCCCGGGGAGGGCCATTA CCATAGCCGAAGGGGAATCGGTGCGGACCGAAATCTCCCGGAAGTTCCGGCTGGAGCAGGTGATCCCGGAGCTGAACCGC TGCGGCTTCGGCACCGAGCAGGTCTTCAGCGACGAGCGGCGCTGGTTTGCGCTCTTGTTGCTGCGCCGCTTGCCAAGGTA TAGCGGCCAATCGGGGAGGTCATAG
Upstream 100 bases:
>100_bases TTCATAAATGCAAAGGCGAGCGTCGCCTTTATCATGAGCGTTGACGGTTATAATTAGCAGCTTATAATCTACTACTTCTG GGAACCCTCAAGGAGGAGCC
Downstream 100 bases:
>100_bases ATGTCGGAGCATAGCCGCGAGACCCGTAACGGCATGTGCGGCATCTGCCCGGCAGGCTGCCTGGTCACCGTGACCCTTGA ACAGGGGAGGCTGGTGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: S-Adenosyl-L-Methionine-Dependentmethyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; Conserved Domain Protein; Methyltransferase Type; Conserved Protein
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MDTFFASPEPQICRQLSEASRGRGPRIVRPSAAADPVQDFARSAAAGLASPPRRLESRFLYDAQGSILFDQITAQPEYYL TRTEASILAANAARIRALTGPTNIMELGAGSAAKTDNLLRAWLERSKAVCYFPVDVSLTALLGACKSISARFPAARVIAV NSEYAEAFPLLSQLSPVLVTFLGSSIGNFSRLEMTSFCLALAASMRPGDFLLLGLDLVKRSSVLEAAYNDRAGVTERFTR NIFARMNRELGSAIDLESIEHSARYQAELEQIEIDACFTKRQAFLLQPPGRAITIAEGESVRTEISRKFRLEQVIPELNR CGFGTEQVFSDERRWFALLLLRRLPRYSGQSGRS
Sequences:
>Translated_354_residues MDTFFASPEPQICRQLSEASRGRGPRIVRPSAAADPVQDFARSAAAGLASPPRRLESRFLYDAQGSILFDQITAQPEYYL TRTEASILAANAARIRALTGPTNIMELGAGSAAKTDNLLRAWLERSKAVCYFPVDVSLTALLGACKSISARFPAARVIAV NSEYAEAFPLLSQLSPVLVTFLGSSIGNFSRLEMTSFCLALAASMRPGDFLLLGLDLVKRSSVLEAAYNDRAGVTERFTR NIFARMNRELGSAIDLESIEHSARYQAELEQIEIDACFTKRQAFLLQPPGRAITIAEGESVRTEISRKFRLEQVIPELNR CGFGTEQVFSDERRWFALLLLRRLPRYSGQSGRS >Mature_354_residues MDTFFASPEPQICRQLSEASRGRGPRIVRPSAAADPVQDFARSAAAGLASPPRRLESRFLYDAQGSILFDQITAQPEYYL TRTEASILAANAARIRALTGPTNIMELGAGSAAKTDNLLRAWLERSKAVCYFPVDVSLTALLGACKSISARFPAARVIAV NSEYAEAFPLLSQLSPVLVTFLGSSIGNFSRLEMTSFCLALAASMRPGDFLLLGLDLVKRSSVLEAAYNDRAGVTERFTR NIFARMNRELGSAIDLESIEHSARYQAELEQIEIDACFTKRQAFLLQPPGRAITIAEGESVRTEISRKFRLEQVIPELNR CGFGTEQVFSDERRWFALLLLRRLPRYSGQSGRS
Specific function: Unknown
COG id: COG4301
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39071; Mature: 39071
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTFFASPEPQICRQLSEASRGRGPRIVRPSAAADPVQDFARSAAAGLASPPRRLESRFL CCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHEE YDAQGSILFDQITAQPEYYLTRTEASILAANAARIRALTGPTNIMELGAGSAAKTDNLLR ECCCCCEEEEHHCCCCCEEEEECHHHHHHHCHHHEEEECCCCHHHHHCCCCCHHHHHHHH AWLERSKAVCYFPVDVSLTALLGACKSISARFPAARVIAVNSEYAEAFPLLSQLSPVLVT HHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH FLGSSIGNFSRLEMTSFCLALAASMRPGDFLLLGLDLVKRSSVLEAAYNDRAGVTERFTR HHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHH NIFARMNRELGSAIDLESIEHSARYQAELEQIEIDACFTKRQAFLLQPPGRAITIAEGES HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCH VRTEISRKFRLEQVIPELNRCGFGTEQVFSDERRWFALLLLRRLPRYSGQSGRS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDTFFASPEPQICRQLSEASRGRGPRIVRPSAAADPVQDFARSAAAGLASPPRRLESRFL CCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHEE YDAQGSILFDQITAQPEYYLTRTEASILAANAARIRALTGPTNIMELGAGSAAKTDNLLR ECCCCCEEEEHHCCCCCEEEEECHHHHHHHCHHHEEEECCCCHHHHHCCCCCHHHHHHHH AWLERSKAVCYFPVDVSLTALLGACKSISARFPAARVIAVNSEYAEAFPLLSQLSPVLVT HHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH FLGSSIGNFSRLEMTSFCLALAASMRPGDFLLLGLDLVKRSSVLEAAYNDRAGVTERFTR HHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHH NIFARMNRELGSAIDLESIEHSARYQAELEQIEIDACFTKRQAFLLQPPGRAITIAEGES HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCH VRTEISRKFRLEQVIPELNRCGFGTEQVFSDERRWFALLLLRRLPRYSGQSGRS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA