| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is celB [H]
Identifier: 197117954
GI number: 197117954
Start: 1814665
End: 1816089
Strand: Direct
Name: celB [H]
Synonym: Gbem_1567
Alternate gene names: 197117954
Gene position: 1814665-1816089 (Clockwise)
Preceding gene: 197117951
Following gene: 308535249
Centisome position: 39.32
GC content: 62.46
Gene sequence:
>1425_bases ATGCAGCGTATCACTTTCGGCACCTCTGGCTGGCGCGGCATCATGTGTGAAGATTTCATCTTTGAGAATGTGAAGGTAGT CACTCAGGCCATTGCGGACAACGTCAAGGCCTCCGGCGAGGCGCGCAAGGGAATCATCGTAGGGTACGACTCCCGTTTCA TGGGCGAATCCTTCGCCCGTGAGGCCGCCCGCGTGCTGACTGGAGCCGGCATCACCACCTATCTTTGCATCCGCGACACC CCCACCCCTGTAATCGCTTTCGAGATCCTCAGGCGCGGCACGGCAGGCGCCATCAACTTCACCGCCAGCCACAATCCCCC CGAATATAACGGCATCAAGTTTTCCCCCTCCTGGGGGGGACCTGCCCTGCCGCAGACCACCACCGACATCGAAAACCGCG CCAACGAGATGGCGGGAGAGATCTGCTACACGGAGTGCTCCATCGACGAGGCGATGCAGAAGGGGCTCCTGGTGGAGATC GACCCGATGCAGGCTTACCTGGAGGATCTGGCAACCAAGGTCGATTTCGCCGCCATCGCCAAGTTGGGGACCATCGCCGT AAATCCTCTCTACGGCACCGCCCGCGGCTACCTCGCCGAACCGCTCAAGGCCCACGGCGTCAAAGTGGTGCAGATGAACG CCAATCGAGACCCCTACTTCGGCGGATTCCCCCCCGAACCGTCCGAGAAATACATCCAGGACTTCATCCGGCTGGTGCAG CAGGACCCTTCCATCAGCCTGGGGATCGCCACCGACGGCGACGCGGACCGCTTCGGCATCGTGGATAGCGACGGCAGCTT CATTGAGCCCAACTACATCATCGCGCTGCTCCTCGATTACCTGGTCCGGGTGAAGGGGATGACCGGCGGGGTAGGGCGCT CCGTCGCCACCTCGCATCTGGTGGACGCGGTGGCCAAGCTGCACGGGATCGAGGTCTTCGAGACGCCCGTAGGCTTCAAG TTCATCGGCGAGCTGATCAGCCAGGACAAGATCATCATCGGCGGCGAAGAGAGCGCCGGGCTCACCATCAAGGGGCACGT CCCCGAAAAGGACGGCATCCTGGCCTGCCTGCTGGTGGCCGAGATGGTCGCGCGCGAAGGCAAGCCGGTGAGGGCTCTGC TGGAGCAGCTCTACGAGAAGGTGGGGCGCTATCTCACCAAGCGCGTCAACATCACGCTGTCGCCGGAACTGGAAGAAGTC TTCCCGGAACGCATCGCGGCCACCCCCGCAGGCTTCGCAGGAGTATCGGTAAAGCAGAAGGTGACGGTGGACGGCAACAA GTTCATCCTGGAGGACGGGAGCTGGCTCCTGTTCAGGAAGTCTGGGACCGAACCGGTGGTGCGGCTTTACGCCGAGGCCT CCAACGAGGCGCGCCTGCAGGCGCTTTTGGAAGCCGGCCGCGAATTCATCGTGGGCAAAGCGTAA
Upstream 100 bases:
>100_bases TTTTCAGGTCGCTTGGTGCTGTGATTTCGCCCCCTTCCATCGGGGCGAGCGGGTGTTCGCCTCACCATCTGGTGCCTATT CAATTCTTTAGGAGGGATTT
Downstream 100 bases:
>100_bases GCCGGAAGCGTTCCACAATCGACAGCGATGGCGTTTTTTCGCCCCAAGCGAGTCGGGGCGAGTTTAAAAAAAATAAAAAT GGGACGCGGATGAATCTGAA
Product: phosphoglucomutase/phosphomannomutase family protein
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MQRITFGTSGWRGIMCEDFIFENVKVVTQAIADNVKASGEARKGIIVGYDSRFMGESFAREAARVLTGAGITTYLCIRDT PTPVIAFEILRRGTAGAINFTASHNPPEYNGIKFSPSWGGPALPQTTTDIENRANEMAGEICYTECSIDEAMQKGLLVEI DPMQAYLEDLATKVDFAAIAKLGTIAVNPLYGTARGYLAEPLKAHGVKVVQMNANRDPYFGGFPPEPSEKYIQDFIRLVQ QDPSISLGIATDGDADRFGIVDSDGSFIEPNYIIALLLDYLVRVKGMTGGVGRSVATSHLVDAVAKLHGIEVFETPVGFK FIGELISQDKIIIGGEESAGLTIKGHVPEKDGILACLLVAEMVAREGKPVRALLEQLYEKVGRYLTKRVNITLSPELEEV FPERIAATPAGFAGVSVKQKVTVDGNKFILEDGSWLLFRKSGTEPVVRLYAEASNEARLQALLEAGREFIVGKA
Sequences:
>Translated_474_residues MQRITFGTSGWRGIMCEDFIFENVKVVTQAIADNVKASGEARKGIIVGYDSRFMGESFAREAARVLTGAGITTYLCIRDT PTPVIAFEILRRGTAGAINFTASHNPPEYNGIKFSPSWGGPALPQTTTDIENRANEMAGEICYTECSIDEAMQKGLLVEI DPMQAYLEDLATKVDFAAIAKLGTIAVNPLYGTARGYLAEPLKAHGVKVVQMNANRDPYFGGFPPEPSEKYIQDFIRLVQ QDPSISLGIATDGDADRFGIVDSDGSFIEPNYIIALLLDYLVRVKGMTGGVGRSVATSHLVDAVAKLHGIEVFETPVGFK FIGELISQDKIIIGGEESAGLTIKGHVPEKDGILACLLVAEMVAREGKPVRALLEQLYEKVGRYLTKRVNITLSPELEEV FPERIAATPAGFAGVSVKQKVTVDGNKFILEDGSWLLFRKSGTEPVVRLYAEASNEARLQALLEAGREFIVGKA >Mature_474_residues MQRITFGTSGWRGIMCEDFIFENVKVVTQAIADNVKASGEARKGIIVGYDSRFMGESFAREAARVLTGAGITTYLCIRDT PTPVIAFEILRRGTAGAINFTASHNPPEYNGIKFSPSWGGPALPQTTTDIENRANEMAGEICYTECSIDEAMQKGLLVEI DPMQAYLEDLATKVDFAAIAKLGTIAVNPLYGTARGYLAEPLKAHGVKVVQMNANRDPYFGGFPPEPSEKYIQDFIRLVQ QDPSISLGIATDGDADRFGIVDSDGSFIEPNYIIALLLDYLVRVKGMTGGVGRSVATSHLVDAVAKLHGIEVFETPVGFK FIGELISQDKIIIGGEESAGLTIKGHVPEKDGILACLLVAEMVAREGKPVRALLEQLYEKVGRYLTKRVNITLSPELEEV FPERIAATPAGFAGVSVKQKVTVDGNKFILEDGSWLLFRKSGTEPVVRLYAEASNEARLQALLEAGREFIVGKA
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI21361621, Length=494, Percent_Identity=29.3522267206478, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI290463102, Length=520, Percent_Identity=28.6538461538462, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI133922562, Length=473, Percent_Identity=29.3868921775898, Blast_Score=119, Evalue=9e-27, Organism=Homo sapiens, GI31377548, Length=542, Percent_Identity=26.1992619926199, Blast_Score=113, Evalue=4e-25, Organism=Homo sapiens, GI290463104, Length=332, Percent_Identity=28.9156626506024, Blast_Score=99, Evalue=1e-20, Organism=Escherichia coli, GI1786904, Length=504, Percent_Identity=30.7539682539683, Blast_Score=169, Evalue=4e-43, Organism=Escherichia coli, GI1788361, Length=435, Percent_Identity=28.0459770114943, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI1789566, Length=460, Percent_Identity=25.8695652173913, Blast_Score=73, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17535441, Length=513, Percent_Identity=27.6803118908382, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71993870, Length=516, Percent_Identity=25.3875968992248, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71993878, Length=115, Percent_Identity=33.0434782608696, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6323752, Length=521, Percent_Identity=27.447216890595, Blast_Score=121, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6322722, Length=432, Percent_Identity=27.0833333333333, Blast_Score=110, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6323934, Length=407, Percent_Identity=25.3071253071253, Blast_Score=85, Evalue=3e-17, Organism=Drosophila melanogaster, GI17864244, Length=515, Percent_Identity=29.5145631067961, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI20129809, Length=554, Percent_Identity=25.2707581227437, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24651977, Length=460, Percent_Identity=26.5217391304348, Blast_Score=100, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005852 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 51449; Mature: 51449
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRITFGTSGWRGIMCEDFIFENVKVVTQAIADNVKASGEARKGIIVGYDSRFMGESFAR CCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHH EAARVLTGAGITTYLCIRDTPTPVIAFEILRRGTAGAINFTASHNPPEYNGIKFSPSWGG HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCC PALPQTTTDIENRANEMAGEICYTECSIDEAMQKGLLVEIDPMQAYLEDLATKVDFAAIA CCCCCCCHHHHHHHHHHHHHHEEEECCHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHH KLGTIAVNPLYGTARGYLAEPLKAHGVKVVQMNANRDPYFGGFPPEPSEKYIQDFIRLVQ HHCCEEECCCCCCCCCHHHCCHHHCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH QDPSISLGIATDGDADRFGIVDSDGSFIEPNYIIALLLDYLVRVKGMTGGVGRSVATSHL CCCCEEEEEECCCCCCCCCEECCCCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH VDAVAKLHGIEVFETPVGFKFIGELISQDKIIIGGEESAGLTIKGHVPEKDGILACLLVA HHHHHHHHCCEEEECCCCHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHH EMVAREGKPVRALLEQLYEKVGRYLTKRVNITLSPELEEVFPERIAATPAGFAGVSVKQK HHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEE VTVDGNKFILEDGSWLLFRKSGTEPVVRLYAEASNEARLQALLEAGREFIVGKA EEECCCEEEEECCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCHHCCCCC >Mature Secondary Structure MQRITFGTSGWRGIMCEDFIFENVKVVTQAIADNVKASGEARKGIIVGYDSRFMGESFAR CCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHH EAARVLTGAGITTYLCIRDTPTPVIAFEILRRGTAGAINFTASHNPPEYNGIKFSPSWGG HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCC PALPQTTTDIENRANEMAGEICYTECSIDEAMQKGLLVEIDPMQAYLEDLATKVDFAAIA CCCCCCCHHHHHHHHHHHHHHEEEECCHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHH KLGTIAVNPLYGTARGYLAEPLKAHGVKVVQMNANRDPYFGGFPPEPSEKYIQDFIRLVQ HHCCEEECCCCCCCCCHHHCCHHHCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH QDPSISLGIATDGDADRFGIVDSDGSFIEPNYIIALLLDYLVRVKGMTGGVGRSVATSHL CCCCEEEEEECCCCCCCCCEECCCCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH VDAVAKLHGIEVFETPVGFKFIGELISQDKIIIGGEESAGLTIKGHVPEKDGILACLLVA HHHHHHHHCCEEEECCCCHHHHHHHHCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHH EMVAREGKPVRALLEQLYEKVGRYLTKRVNITLSPELEEVFPERIAATPAGFAGVSVKQK HHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEE VTVDGNKFILEDGSWLLFRKSGTEPVVRLYAEASNEARLQALLEAGREFIVGKA EEECCCEEEEECCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8025683 [H]