| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is pylG-3
Identifier: 197117924
GI number: 197117924
Start: 1786324
End: 1786809
Strand: Direct
Name: pylG-3
Synonym: Gbem_1537
Alternate gene names: NA
Gene position: 1786324-1786809 (Clockwise)
Preceding gene: 197117923
Following gene: 197117925
Centisome position: 38.71
GC content: 61.11
Gene sequence:
>486_bases ATGAGGGGAGAGCGAGGTTTTTCGCTGATCGAAATGGTGGTGGTGCTGGCCATCATCGGCACCCTGCTCGGCATTGGGAG CATGCAGTTCGGCCGCATGCAGAAAAAGTCGAGCATTGAGCAGCAGACCAGGACCATCTACGCCAAGATGACCGAGATGC GCGTCGAGGCCCTCTACACTAAGCAGGCGCGCACCTTGGTGCTCGGAGACCGGAGGCTGACAGTCTACGCGAGCTCCGAC GGGAGCGGTCCTGCGCTTCAGGTGCAGCAACTTCCGTTCGCAGCCACCATGGGCGCCGACGACCGCGTCAGCTTCGAGGC CAGCGGCCTGATGACAGGGGGCGACCGCGCCCTCTGCGTGGAACCCGGTGGGGTGGCGGAGAACCCAGGAAATATCGACA GCGTCGTGGTGACCGCTGCCAAGGCCTATATGGGAAAAAGAAACTCGGGAGGAGCCTGTGTCCCAACACAAATTGTTGCC AAATAA
Upstream 100 bases:
>100_bases GAATCCCGATGACCGGGAAGCCTCCGGCTGACGCCTTCCCCATTGTGACCAAGAGCGGCAACAAGCCGGTCAAGCGGATC ATGCACATACAGGAGCGGTA
Downstream 100 bases:
>100_bases CAGCGGGTTCACGCTGGTCGAGCTCATGGTCGCCCTGCTGATCGCCATGGTCGGGATGTTTGGGGTGCTGGAGACCATCA ACGTCTCCCTGCAACAAACA
Product: type IV pilus assembly protein PylG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRGERGFSLIEMVVVLAIIGTLLGIGSMQFGRMQKKSSIEQQTRTIYAKMTEMRVEALYTKQARTLVLGDRRLTVYASSD GSGPALQVQQLPFAATMGADDRVSFEASGLMTGGDRALCVEPGGVAENPGNIDSVVVTAAKAYMGKRNSGGACVPTQIVA K
Sequences:
>Translated_161_residues MRGERGFSLIEMVVVLAIIGTLLGIGSMQFGRMQKKSSIEQQTRTIYAKMTEMRVEALYTKQARTLVLGDRRLTVYASSD GSGPALQVQQLPFAATMGADDRVSFEASGLMTGGDRALCVEPGGVAENPGNIDSVVVTAAKAYMGKRNSGGACVPTQIVA K >Mature_161_residues MRGERGFSLIEMVVVLAIIGTLLGIGSMQFGRMQKKSSIEQQTRTIYAKMTEMRVEALYTKQARTLVLGDRRLTVYASSD GSGPALQVQQLPFAATMGADDRVSFEASGLMTGGDRALCVEPGGVAENPGNIDSVVVTAAKAYMGKRNSGGACVPTQIVA K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17079; Mature: 17079
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGERGFSLIEMVVVLAIIGTLLGIGSMQFGRMQKKSSIEQQTRTIYAKMTEMRVEALYT CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQARTLVLGDRRLTVYASSDGSGPALQVQQLPFAATMGADDRVSFEASGLMTGGDRALCV HCCEEEEECCCEEEEEECCCCCCCEEEEECCCEEEECCCCCCEEEEECCEEECCCEEEEE EPGGVAENPGNIDSVVVTAAKAYMGKRNSGGACVPTQIVAK CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCC >Mature Secondary Structure MRGERGFSLIEMVVVLAIIGTLLGIGSMQFGRMQKKSSIEQQTRTIYAKMTEMRVEALYT CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQARTLVLGDRRLTVYASSDGSGPALQVQQLPFAATMGADDRVSFEASGLMTGGDRALCV HCCEEEEECCCEEEEEECCCCCCCEEEEECCCEEEECCCCCCEEEEECCEEECCCEEEEE EPGGVAENPGNIDSVVVTAAKAYMGKRNSGGACVPTQIVAK CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA