Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117911

Identifier: 197117911

GI number: 197117911

Start: 1764316

End: 1765209

Strand: Direct

Name: 197117911

Synonym: Gbem_1524

Alternate gene names: NA

Gene position: 1764316-1765209 (Clockwise)

Preceding gene: 197117898

Following gene: 197117913

Centisome position: 38.23

GC content: 63.09

Gene sequence:

>894_bases
ATGGAAATCCCGCAGTACCCCAACTCCAGGGGGATCAACGTCGACGACAAGTCGCAGCTGGACCCGCTTTTCGACGCGCT
GCAGCCGCGGGTCTCCGAACTCACCTTCGCGAACCTCTATCTATTCAGGAAGGCGCACGACTACAGGCTTACCCGGTTGG
GGGACGCGGTGCTGGCGCTTGGGCGCGGCTACGACGGCTCCCCCTATTTTCTTCCCCCCTTTGGCGGCGACATTGCCGCC
GCGACCCGCAGGCTTCTCGATGAAGGACTCACCCTCTACGGCGCCGACGACGGTTTCCTCTCCCGCTATCTCCCAAACTT
TGGGCTCGAAGTGGTCCCCGACCGCGACAATTTCGACTATCTGCATCTGAAACAGGAGATGGCGGAACTTAACGGCAAAA
AGTACCACAAGAAAAAGAACCGGGTGAATTACTTCCAGCTGCGGCACCGCCACCAGGTGGAGCTCTTCAACGAGGGGCAC
CTGGATGGGGCGCTGGAACTATTGGAGCAGTGGCGCCGGGTGCGCGCCGAATTCGGTGAGGAGTCGTCGCTCGCCCAGGA
GGTGGAGGGGGCGACCGAGGCGCTGAGGCTTAGGGAAGCGCTCGGGTTGTCGGGGGTGGTGGTGCTGGTCGATGGGGCGG
TGAGGGGGTTCGCGCTAGGCGAGCGGCTGAACCGGGAGACGGCTGTCTGCCATTTTGAGAAGGGGGACCTGTTCCTGGAG
GGGCTGTACCAGTTGCTGGACCGAGAGTTCTCCCGGCTCCTCTTCCCCGAGTGCAGCTACCTGAATCGGGAGCAGGACCT
GGGGGAGCCCGCCTTGAGGCAGGCGAAGCTCTCCTACCACCCGGTGGAGCTGCTGGCGAAATACCGGGTCAGGCGCTCGC
GCCATCCGTTTTGA

Upstream 100 bases:

>100_bases
GTTCGCAATACTATCGTATACGGCGCGGCAATTGCCAGCGTTTTTTCGCATTTTTGCAAATATGTCGGTATACTGTTGAA
AATTTTTTTCCGGAGCCGCC

Downstream 100 bases:

>100_bases
AACGCAGGGATAGATAGCGCTCCAGCTCGACGGCCGCCTGGTCGAAATCCTCCATGCCAAGCTCCGTGTCCGCCTCCCAG
CTGCGGTTTTTGTAGTAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MEIPQYPNSRGINVDDKSQLDPLFDALQPRVSELTFANLYLFRKAHDYRLTRLGDAVLALGRGYDGSPYFLPPFGGDIAA
ATRRLLDEGLTLYGADDGFLSRYLPNFGLEVVPDRDNFDYLHLKQEMAELNGKKYHKKKNRVNYFQLRHRHQVELFNEGH
LDGALELLEQWRRVRAEFGEESSLAQEVEGATEALRLREALGLSGVVVLVDGAVRGFALGERLNRETAVCHFEKGDLFLE
GLYQLLDREFSRLLFPECSYLNREQDLGEPALRQAKLSYHPVELLAKYRVRRSRHPF

Sequences:

>Translated_297_residues
MEIPQYPNSRGINVDDKSQLDPLFDALQPRVSELTFANLYLFRKAHDYRLTRLGDAVLALGRGYDGSPYFLPPFGGDIAA
ATRRLLDEGLTLYGADDGFLSRYLPNFGLEVVPDRDNFDYLHLKQEMAELNGKKYHKKKNRVNYFQLRHRHQVELFNEGH
LDGALELLEQWRRVRAEFGEESSLAQEVEGATEALRLREALGLSGVVVLVDGAVRGFALGERLNRETAVCHFEKGDLFLE
GLYQLLDREFSRLLFPECSYLNREQDLGEPALRQAKLSYHPVELLAKYRVRRSRHPF
>Mature_297_residues
MEIPQYPNSRGINVDDKSQLDPLFDALQPRVSELTFANLYLFRKAHDYRLTRLGDAVLALGRGYDGSPYFLPPFGGDIAA
ATRRLLDEGLTLYGADDGFLSRYLPNFGLEVVPDRDNFDYLHLKQEMAELNGKKYHKKKNRVNYFQLRHRHQVELFNEGH
LDGALELLEQWRRVRAEFGEESSLAQEVEGATEALRLREALGLSGVVVLVDGAVRGFALGERLNRETAVCHFEKGDLFLE
GLYQLLDREFSRLLFPECSYLNREQDLGEPALRQAKLSYHPVELLAKYRVRRSRHPF

Specific function: Unknown

COG id: COG4866

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34145; Mature: 34145

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIPQYPNSRGINVDDKSQLDPLFDALQPRVSELTFANLYLFRKAHDYRLTRLGDAVLAL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
GRGYDGSPYFLPPFGGDIAAATRRLLDEGLTLYGADDGFLSRYLPNFGLEVVPDRDNFDY
CCCCCCCCEECCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCCCEEECCCCCCCH
LHLKQEMAELNGKKYHKKKNRVNYFQLRHRHQVELFNEGHLDGALELLEQWRRVRAEFGE
HHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
ESSLAQEVEGATEALRLREALGLSGVVVLVDGAVRGFALGERLNRETAVCHFEKGDLFLE
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCHHHH
GLYQLLDREFSRLLFPECSYLNREQDLGEPALRQAKLSYHPVELLAKYRVRRSRHPF
HHHHHHHHHHHHHHCCCHHHCCCHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEIPQYPNSRGINVDDKSQLDPLFDALQPRVSELTFANLYLFRKAHDYRLTRLGDAVLAL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
GRGYDGSPYFLPPFGGDIAAATRRLLDEGLTLYGADDGFLSRYLPNFGLEVVPDRDNFDY
CCCCCCCCEECCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCCCEEECCCCCCCH
LHLKQEMAELNGKKYHKKKNRVNYFQLRHRHQVELFNEGHLDGALELLEQWRRVRAEFGE
HHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
ESSLAQEVEGATEALRLREALGLSGVVVLVDGAVRGFALGERLNRETAVCHFEKGDLFLE
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCCCHHHH
GLYQLLDREFSRLLFPECSYLNREQDLGEPALRQAKLSYHPVELLAKYRVRRSRHPF
HHHHHHHHHHHHHHCCCHHHCCCHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA