Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117871

Identifier: 197117871

GI number: 197117871

Start: 1720642

End: 1721151

Strand: Reverse

Name: 197117871

Synonym: Gbem_1484

Alternate gene names: NA

Gene position: 1721151-1720642 (Counterclockwise)

Preceding gene: 308535242

Following gene: 308535241

Centisome position: 37.29

GC content: 45.69

Gene sequence:

>510_bases
ATGGTTCTGGGACCCGGGAAAATAGTTGGGACATTCTTTACTATCCTTGCACTGATAGTTGCGGTGACAACCATCGTAAG
GATTCAGGTCTCGATGAGGATGCAGTACGTCAATGGAGAGTTGGCTGACGACACCAATGGCAGTAAAGACATCTCCTACA
CGATTGGACGCGTCGGCACTAGTAAAGGAAACACAGTCAACGTCAGAGTACGGTACCGTTACATGGTCCAGGGCAAGGAG
TACAAAGGACACATTTTCACCCTTAATGGGAATTCGTACGCTACTTTTTCCGAGGACAAAGTAAAGAAGCTCATATCGGA
TCTAACAAGCTCACCGCAGATCCGGGTTTGGTACGATCCGAAACACCCCGAATTCTCGGTTATTGTCGAGCCAAAGCTTG
GTATTGAGTGGATGTGGTTAGGTTCACTAGTTCTTTTAGCTCTGCTCAGTTTTAAATATTTAGACAGAGCCATAATCAGG
ATGCAAGGCCTTAATAAAGCAACCAGTTAA

Upstream 100 bases:

>100_bases
AGATCTCTTTAATTTAAATTGGCACAGCATCTGCGTTTACAGGAGATTGCTGCGAAACCGATGGATTCCCTCTTGCTGAG
ATCTGATTAAAGGAAATGAT

Downstream 100 bases:

>100_bases
CCATGACGGTGCGAGGTGGAGCAACTTTTTGCTCTTGCAGTTGCAGTGACACCTTATCCCAGGCTAAACAAGGCATTACC
AGCAAGGAAATAGCTTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MVLGPGKIVGTFFTILALIVAVTTIVRIQVSMRMQYVNGELADDTNGSKDISYTIGRVGTSKGNTVNVRVRYRYMVQGKE
YKGHIFTLNGNSYATFSEDKVKKLISDLTSSPQIRVWYDPKHPEFSVIVEPKLGIEWMWLGSLVLLALLSFKYLDRAIIR
MQGLNKATS

Sequences:

>Translated_169_residues
MVLGPGKIVGTFFTILALIVAVTTIVRIQVSMRMQYVNGELADDTNGSKDISYTIGRVGTSKGNTVNVRVRYRYMVQGKE
YKGHIFTLNGNSYATFSEDKVKKLISDLTSSPQIRVWYDPKHPEFSVIVEPKLGIEWMWLGSLVLLALLSFKYLDRAIIR
MQGLNKATS
>Mature_169_residues
MVLGPGKIVGTFFTILALIVAVTTIVRIQVSMRMQYVNGELADDTNGSKDISYTIGRVGTSKGNTVNVRVRYRYMVQGKE
YKGHIFTLNGNSYATFSEDKVKKLISDLTSSPQIRVWYDPKHPEFSVIVEPKLGIEWMWLGSLVLLALLSFKYLDRAIIR
MQGLNKATS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18998; Mature: 18998

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLGPGKIVGTFFTILALIVAVTTIVRIQVSMRMQYVNGELADDTNGSKDISYTIGRVGT
CEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEECCCCCCCCCEEEEEEEEEC
SKGNTVNVRVRYRYMVQGKEYKGHIFTLNGNSYATFSEDKVKKLISDLTSSPQIRVWYDP
CCCCEEEEEEEEEEEEECCCCCCEEEEEECCEEEEECHHHHHHHHHHHCCCCCEEEEECC
KHPEFSVIVEPKLGIEWMWLGSLVLLALLSFKYLDRAIIRMQGLNKATS
CCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVLGPGKIVGTFFTILALIVAVTTIVRIQVSMRMQYVNGELADDTNGSKDISYTIGRVGT
CEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEECCCCCCCCCEEEEEEEEEC
SKGNTVNVRVRYRYMVQGKEYKGHIFTLNGNSYATFSEDKVKKLISDLTSSPQIRVWYDP
CCCCEEEEEEEEEEEEECCCCCCEEEEEECCEEEEECHHHHHHHHHHHCCCCCEEEEECC
KHPEFSVIVEPKLGIEWMWLGSLVLLALLSFKYLDRAIIRMQGLNKATS
CCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA