| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117871
Identifier: 197117871
GI number: 197117871
Start: 1720642
End: 1721151
Strand: Reverse
Name: 197117871
Synonym: Gbem_1484
Alternate gene names: NA
Gene position: 1721151-1720642 (Counterclockwise)
Preceding gene: 308535242
Following gene: 308535241
Centisome position: 37.29
GC content: 45.69
Gene sequence:
>510_bases ATGGTTCTGGGACCCGGGAAAATAGTTGGGACATTCTTTACTATCCTTGCACTGATAGTTGCGGTGACAACCATCGTAAG GATTCAGGTCTCGATGAGGATGCAGTACGTCAATGGAGAGTTGGCTGACGACACCAATGGCAGTAAAGACATCTCCTACA CGATTGGACGCGTCGGCACTAGTAAAGGAAACACAGTCAACGTCAGAGTACGGTACCGTTACATGGTCCAGGGCAAGGAG TACAAAGGACACATTTTCACCCTTAATGGGAATTCGTACGCTACTTTTTCCGAGGACAAAGTAAAGAAGCTCATATCGGA TCTAACAAGCTCACCGCAGATCCGGGTTTGGTACGATCCGAAACACCCCGAATTCTCGGTTATTGTCGAGCCAAAGCTTG GTATTGAGTGGATGTGGTTAGGTTCACTAGTTCTTTTAGCTCTGCTCAGTTTTAAATATTTAGACAGAGCCATAATCAGG ATGCAAGGCCTTAATAAAGCAACCAGTTAA
Upstream 100 bases:
>100_bases AGATCTCTTTAATTTAAATTGGCACAGCATCTGCGTTTACAGGAGATTGCTGCGAAACCGATGGATTCCCTCTTGCTGAG ATCTGATTAAAGGAAATGAT
Downstream 100 bases:
>100_bases CCATGACGGTGCGAGGTGGAGCAACTTTTTGCTCTTGCAGTTGCAGTGACACCTTATCCCAGGCTAAACAAGGCATTACC AGCAAGGAAATAGCTTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MVLGPGKIVGTFFTILALIVAVTTIVRIQVSMRMQYVNGELADDTNGSKDISYTIGRVGTSKGNTVNVRVRYRYMVQGKE YKGHIFTLNGNSYATFSEDKVKKLISDLTSSPQIRVWYDPKHPEFSVIVEPKLGIEWMWLGSLVLLALLSFKYLDRAIIR MQGLNKATS
Sequences:
>Translated_169_residues MVLGPGKIVGTFFTILALIVAVTTIVRIQVSMRMQYVNGELADDTNGSKDISYTIGRVGTSKGNTVNVRVRYRYMVQGKE YKGHIFTLNGNSYATFSEDKVKKLISDLTSSPQIRVWYDPKHPEFSVIVEPKLGIEWMWLGSLVLLALLSFKYLDRAIIR MQGLNKATS >Mature_169_residues MVLGPGKIVGTFFTILALIVAVTTIVRIQVSMRMQYVNGELADDTNGSKDISYTIGRVGTSKGNTVNVRVRYRYMVQGKE YKGHIFTLNGNSYATFSEDKVKKLISDLTSSPQIRVWYDPKHPEFSVIVEPKLGIEWMWLGSLVLLALLSFKYLDRAIIR MQGLNKATS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18998; Mature: 18998
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLGPGKIVGTFFTILALIVAVTTIVRIQVSMRMQYVNGELADDTNGSKDISYTIGRVGT CEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEECCCCCCCCCEEEEEEEEEC SKGNTVNVRVRYRYMVQGKEYKGHIFTLNGNSYATFSEDKVKKLISDLTSSPQIRVWYDP CCCCEEEEEEEEEEEEECCCCCCEEEEEECCEEEEECHHHHHHHHHHHCCCCCEEEEECC KHPEFSVIVEPKLGIEWMWLGSLVLLALLSFKYLDRAIIRMQGLNKATS CCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVLGPGKIVGTFFTILALIVAVTTIVRIQVSMRMQYVNGELADDTNGSKDISYTIGRVGT CEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEECCCCCCCCCEEEEEEEEEC SKGNTVNVRVRYRYMVQGKEYKGHIFTLNGNSYATFSEDKVKKLISDLTSSPQIRVWYDP CCCCEEEEEEEEEEEEECCCCCCEEEEEECCEEEEECHHHHHHHHHHHCCCCCEEEEECC KHPEFSVIVEPKLGIEWMWLGSLVLLALLSFKYLDRAIIRMQGLNKATS CCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA