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The map label for this gene is bamH [H]

Identifier: 197117837

GI number: 197117837

Start: 1675560

End: 1677470

Strand: Direct

Name: bamH [H]

Synonym: Gbem_1450

Alternate gene names: 197117837

Gene position: 1675560-1677470 (Clockwise)

Preceding gene: 197117836

Following gene: 197117838

Centisome position: 36.31

GC content: 62.27

Gene sequence:

>1911_bases
ATGCCAAGGATAAAATCGCCCGCAGAATTGGAAGCATTCAGGAAAGCCATCCTGGCCAAAAGGGATGACAAGAAGCCCTG
CATCACGCTCTGCTCCGGCAGCGCCTGCCACGCCACGGGGAGCGAGAAGGTCGCCGACGCGATCCTGGCCGAGTTGGAGA
GCCACGGGCTCAAGGATCAGGTCGATATCAGAAGGACCGGCTGCCACGGCTTCTGCGAGCAGGGCCCCATCGTGGTGGTC
TACCCGGAAGGGATCAGCTACCTGAAGGTCAAGCCGGAGGACGTCTGCGAGATCGTCTCCCATACCTTCAAGGAGAAGAA
GCTGGTTGAGCGGCTGCTCTACGTCGACCCGAACACCGGCGACAAGTCGAGCCACGAGCACGACATCCCCTTCTACAAGA
ACCAGCAGCGCCTCATCCTAGGTCTCAACACCAAGATCGACCCGAAGAGTCTGGAGGATTACCTGGCCGTCGGCGGCTAC
CAGGCCATGGCCAAGGCGCTGCTGCAGATGACACCGGAAGAGGTGATCGGCGAGGTCAAGGGGGCGAAGCTCAGGGGACG
CGGCGGCGCCGGCTTCCCCTCGGGGACCAAATGGGAGTTCGCGCGCAACGCGCCGGGGGACCAAAAGTACGTCGTGGTCA
ACTGCGACGAGGGGGACCCGGGTGCCTACATGGACCGCTCCCTCATGGAGGGTAACCCCTTCACCGTGCTCGAAGGGCTC
CTGATCGGCGCCTACGCCATCGGCGCGAGTGAGGGTTACATCTACGTCCGGCAGGAATACCCGCTCGCCGTAGACAACCT
GACCGTCGCCATAAAAAAGGCGGAGGAACACGGCTTCCTGGGGAAAAACATCCTCGGCTCCGGGTTCGACTTCACCGTCA
AGGTGCACCGGGGTGCGGGGGCGTTCATCTGCGGCGAGGAGACCTCACTCCTGCAGTCGCTGGAAGGAAAGCCCGGCGAG
CCCAAGCCGAGGCCCCCTTTCCCGGCAGTCCGCGGCCTCTGGGGCAAGCCGACCAACATCAACAACGTCGAGACCTGGGC
CAATATCCCGGTGATCATCAACAAGGGGGCCGATTACTTCAGCTCCATCGGGACCGAGAGCAGCAAGGGGACCAAGATCT
TCTCCCTGGTAGGGAAGGTGAACAACACCGGCCTCGTCGAGGTCCCCATGGGGATGCCGCTCAGGGACATCATCTTCAAG
ATCGGCGGCGGGGTCCCCAACGGCAAGAAGTTCAAGGCGGTGCAGACCGGCGGCCCTTCCGGCGGCTGCATTCCCGAGGA
ATACCTCGACGTCAAGGTCGACTTCGACGAGCTGATGAAGATGGGCGCCATGATGGGTTCCGGCGGCATGATCGTCATGG
ACGAGGACACCTGTCTCGTCGACATCGCCCGGTACTTCCTGGAGTTTTTGAGCGACGAGTCCTGCGGCAAGTGCGTACCC
TGCCGCGAGGGTATCCGCCAGATGCTCAAGGTGATGACCGCCATCACTCAAGGGAAGGGTAAGGAAGGGGACATCGAACT
CCTGGAGAACATGGCCATGGCGACCCAGGGTGCGGCACTTTGCGCCCTTGGCAAGACCGCTCCGAACCCGGTCCTCTCCA
CGCTCAAGTACTTCCGTCACGAGTACGAGGCCCACATCAAGGAGAAGAGGTGCCCGGCGCTTTCCTGCAAAGAGCTGATC
GCCTTCCACATCGACCCGGCGAAGTGCAAAGGGTGCGGCAGCTGTCTCAGGAAATGCCCCGCCACCGCCATCGAGGGTGG
CAAGAAGACCATCCACGTCATCGACCAGGAGAAGTGCACCAAGTGCGGCACCTGTATCGAAGCCTGCCCGGCGGCGTTCC
ATGCGATAAGCAAGCTCTCCGGCGTGCCGGTGCCGGAACCGCCCCCTCAATCGGCAAGGGCCATAGCTTAA

Upstream 100 bases:

>100_bases
GCGCTGGGGCCGGTCATGGTCATCGACGGCGAGTATCATGGCAACGTGGCGCCTGCGCAGTCGGCCGAAGTGCTGAAAAA
CTACGAGTAAGGGATCTCTT

Downstream 100 bases:

>100_bases
CGACAACGATAGAGTCTCTCACTCTTTCCCGACTCTCCCTCTCCCTCTGGGAGAGGGCCGGGGTGAGGGAATCTGTGGCA
GCGCTAAAAGGAACAGATCA

Product: benzoyl-CoA reductase electron transfer protein

Products: NA

Alternate protein names: NADH dehydrogenase I subunit F 2; NDH-1 subunit F 2 [H]

Number of amino acids: Translated: 636; Mature: 635

Protein sequence:

>636_residues
MPRIKSPAELEAFRKAILAKRDDKKPCITLCSGSACHATGSEKVADAILAELESHGLKDQVDIRRTGCHGFCEQGPIVVV
YPEGISYLKVKPEDVCEIVSHTFKEKKLVERLLYVDPNTGDKSSHEHDIPFYKNQQRLILGLNTKIDPKSLEDYLAVGGY
QAMAKALLQMTPEEVIGEVKGAKLRGRGGAGFPSGTKWEFARNAPGDQKYVVVNCDEGDPGAYMDRSLMEGNPFTVLEGL
LIGAYAIGASEGYIYVRQEYPLAVDNLTVAIKKAEEHGFLGKNILGSGFDFTVKVHRGAGAFICGEETSLLQSLEGKPGE
PKPRPPFPAVRGLWGKPTNINNVETWANIPVIINKGADYFSSIGTESSKGTKIFSLVGKVNNTGLVEVPMGMPLRDIIFK
IGGGVPNGKKFKAVQTGGPSGGCIPEEYLDVKVDFDELMKMGAMMGSGGMIVMDEDTCLVDIARYFLEFLSDESCGKCVP
CREGIRQMLKVMTAITQGKGKEGDIELLENMAMATQGAALCALGKTAPNPVLSTLKYFRHEYEAHIKEKRCPALSCKELI
AFHIDPAKCKGCGSCLRKCPATAIEGGKKTIHVIDQEKCTKCGTCIEACPAAFHAISKLSGVPVPEPPPQSARAIA

Sequences:

>Translated_636_residues
MPRIKSPAELEAFRKAILAKRDDKKPCITLCSGSACHATGSEKVADAILAELESHGLKDQVDIRRTGCHGFCEQGPIVVV
YPEGISYLKVKPEDVCEIVSHTFKEKKLVERLLYVDPNTGDKSSHEHDIPFYKNQQRLILGLNTKIDPKSLEDYLAVGGY
QAMAKALLQMTPEEVIGEVKGAKLRGRGGAGFPSGTKWEFARNAPGDQKYVVVNCDEGDPGAYMDRSLMEGNPFTVLEGL
LIGAYAIGASEGYIYVRQEYPLAVDNLTVAIKKAEEHGFLGKNILGSGFDFTVKVHRGAGAFICGEETSLLQSLEGKPGE
PKPRPPFPAVRGLWGKPTNINNVETWANIPVIINKGADYFSSIGTESSKGTKIFSLVGKVNNTGLVEVPMGMPLRDIIFK
IGGGVPNGKKFKAVQTGGPSGGCIPEEYLDVKVDFDELMKMGAMMGSGGMIVMDEDTCLVDIARYFLEFLSDESCGKCVP
CREGIRQMLKVMTAITQGKGKEGDIELLENMAMATQGAALCALGKTAPNPVLSTLKYFRHEYEAHIKEKRCPALSCKELI
AFHIDPAKCKGCGSCLRKCPATAIEGGKKTIHVIDQEKCTKCGTCIEACPAAFHAISKLSGVPVPEPPPQSARAIA
>Mature_635_residues
PRIKSPAELEAFRKAILAKRDDKKPCITLCSGSACHATGSEKVADAILAELESHGLKDQVDIRRTGCHGFCEQGPIVVVY
PEGISYLKVKPEDVCEIVSHTFKEKKLVERLLYVDPNTGDKSSHEHDIPFYKNQQRLILGLNTKIDPKSLEDYLAVGGYQ
AMAKALLQMTPEEVIGEVKGAKLRGRGGAGFPSGTKWEFARNAPGDQKYVVVNCDEGDPGAYMDRSLMEGNPFTVLEGLL
IGAYAIGASEGYIYVRQEYPLAVDNLTVAIKKAEEHGFLGKNILGSGFDFTVKVHRGAGAFICGEETSLLQSLEGKPGEP
KPRPPFPAVRGLWGKPTNINNVETWANIPVIINKGADYFSSIGTESSKGTKIFSLVGKVNNTGLVEVPMGMPLRDIIFKI
GGGVPNGKKFKAVQTGGPSGGCIPEEYLDVKVDFDELMKMGAMMGSGGMIVMDEDTCLVDIARYFLEFLSDESCGKCVPC
REGIRQMLKVMTAITQGKGKEGDIELLENMAMATQGAALCALGKTAPNPVLSTLKYFRHEYEAHIKEKRCPALSCKELIA
FHIDPAKCKGCGSCLRKCPATAIEGGKKTIHVIDQEKCTKCGTCIEACPAAFHAISKLSGVPVPEPPPQSARAIA

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG1894

COG function: function code C; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 51 kDa subunit family [H]

Homologues:

Organism=Homo sapiens, GI20149568, Length=420, Percent_Identity=42.8571428571429, Blast_Score=329, Evalue=5e-90,
Organism=Homo sapiens, GI260656005, Length=420, Percent_Identity=42.8571428571429, Blast_Score=329, Evalue=5e-90,
Organism=Escherichia coli, GI1788620, Length=413, Percent_Identity=42.8571428571429, Blast_Score=356, Evalue=2e-99,
Organism=Caenorhabditis elegans, GI17531727, Length=421, Percent_Identity=43.4679334916865, Blast_Score=324, Evalue=9e-89,
Organism=Drosophila melanogaster, GI19920794, Length=418, Percent_Identity=41.3875598086124, Blast_Score=318, Evalue=5e-87,
Organism=Drosophila melanogaster, GI45550452, Length=378, Percent_Identity=43.1216931216931, Blast_Score=313, Evalue=3e-85,
Organism=Drosophila melanogaster, GI24653819, Length=385, Percent_Identity=33.7662337662338, Blast_Score=232, Evalue=7e-61,
Organism=Drosophila melanogaster, GI24653817, Length=355, Percent_Identity=32.112676056338, Blast_Score=202, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001949
- InterPro:   IPR019575
- InterPro:   IPR011537
- InterPro:   IPR011538
- InterPro:   IPR019554 [H]

Pfam domain/function: PF01512 Complex1_51K; PF10589 NADH_4Fe-4S; PF10531 SLBB [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 68712; Mature: 68581

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00645 COMPLEX1_51K_2 ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRIKSPAELEAFRKAILAKRDDKKPCITLCSGSACHATGSEKVADAILAELESHGLKDQ
CCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC
VDIRRTGCHGFCEQGPIVVVYPEGISYLKVKPEDVCEIVSHTFKEKKLVERLLYVDPNTG
HHHHHCCCCCCCCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHEECCCCC
DKSSHEHDIPFYKNQQRLILGLNTKIDPKSLEDYLAVGGYQAMAKALLQMTPEEVIGEVK
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCC
GAKLRGRGGAGFPSGTKWEFARNAPGDQKYVVVNCDEGDPGAYMDRSLMEGNPFTVLEGL
CCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHH
LIGAYAIGASEGYIYVRQEYPLAVDNLTVAIKKAEEHGFLGKNILGSGFDFTVKVHRGAG
HHHHHHCCCCCCEEEEEECCCEEECCEEEEEEEHHHCCCCCCHHCCCCCEEEEEEECCCC
AFICGEETSLLQSLEGKPGEPKPRPPFPAVRGLWGKPTNINNVETWANIPVIINKGADYF
EEEECCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHCCCCEEEECCCHHH
SSIGTESSKGTKIFSLVGKVNNTGLVEVPMGMPLRDIIFKIGGGVPNGKKFKAVQTGGPS
HHCCCCCCCCCEEEEEHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCCC
GGCIPEEYLDVKVDFDELMKMGAMMGSGGMIVMDEDTCLVDIARYFLEFLSDESCGKCVP
CCCCCHHHEEEEECHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCC
CREGIRQMLKVMTAITQGKGKEGDIELLENMAMATQGAALCALGKTAPNPVLSTLKYFRH
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHH
EYEAHIKEKRCPALSCKELIAFHIDPAKCKGCGSCLRKCPATAIEGGKKTIHVIDQEKCT
HHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCCEEEEEECHHHHH
KCGTCIEACPAAFHAISKLSGVPVPEPPPQSARAIA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRIKSPAELEAFRKAILAKRDDKKPCITLCSGSACHATGSEKVADAILAELESHGLKDQ
CCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCC
VDIRRTGCHGFCEQGPIVVVYPEGISYLKVKPEDVCEIVSHTFKEKKLVERLLYVDPNTG
HHHHHCCCCCCCCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHEECCCCC
DKSSHEHDIPFYKNQQRLILGLNTKIDPKSLEDYLAVGGYQAMAKALLQMTPEEVIGEVK
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHCC
GAKLRGRGGAGFPSGTKWEFARNAPGDQKYVVVNCDEGDPGAYMDRSLMEGNPFTVLEGL
CCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHH
LIGAYAIGASEGYIYVRQEYPLAVDNLTVAIKKAEEHGFLGKNILGSGFDFTVKVHRGAG
HHHHHHCCCCCCEEEEEECCCEEECCEEEEEEEHHHCCCCCCHHCCCCCEEEEEEECCCC
AFICGEETSLLQSLEGKPGEPKPRPPFPAVRGLWGKPTNINNVETWANIPVIINKGADYF
EEEECCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHCCCCEEEECCCHHH
SSIGTESSKGTKIFSLVGKVNNTGLVEVPMGMPLRDIIFKIGGGVPNGKKFKAVQTGGPS
HHCCCCCCCCCEEEEEHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCEEEEEECCCCC
GGCIPEEYLDVKVDFDELMKMGAMMGSGGMIVMDEDTCLVDIARYFLEFLSDESCGKCVP
CCCCCHHHEEEEECHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCC
CREGIRQMLKVMTAITQGKGKEGDIELLENMAMATQGAALCALGKTAPNPVLSTLKYFRH
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHH
EYEAHIKEKRCPALSCKELIAFHIDPAKCKGCGSCLRKCPATAIEGGKKTIHVIDQEKCT
HHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCCEEEEEECHHHHH
KCGTCIEACPAAFHAISKLSGVPVPEPPPQSARAIA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]