Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is bamG [H]

Identifier: 197117836

GI number: 197117836

Start: 1675091

End: 1675549

Strand: Direct

Name: bamG [H]

Synonym: Gbem_1449

Alternate gene names: 197117836

Gene position: 1675091-1675549 (Clockwise)

Preceding gene: 308535239

Following gene: 197117837

Centisome position: 36.3

GC content: 61.0

Gene sequence:

>459_bases
ATGTGCATGGATATCTCGAAGATAGACAACATCATAGACAAGCATAACGCCGAGCAGAGCTCGCTGATCCAGATCCTTTT
GGACATCCAGAGCGAGCACAACTGGCTCCCGAAACAGGCCCTGGACCGCGTCGGCGAGAGGCTGGACGTGCCGATGAGCC
GGATCCAGCACATCACCACCTTCTACAAGGCCTTCAGCCAGGTCCCCAAGGGGCGCCACCAGATCCATGTCTGCATGGGC
ACCGCCTGCCACGTCCGTGGCGCGCAGAGGGTCCTGGACACCATCTCCGACGCGATCGGGATCAAGGCCGGCGAGACCGA
CGCGGACCTCAAGTTCAGCCTCGAAACCGTGAACTGCCTGGGATGCTGCGCGCTGGGGCCGGTCATGGTCATCGACGGCG
AGTATCATGGCAACGTGGCGCCTGCGCAGTCGGCCGAAGTGCTGAAAAACTACGAGTAA

Upstream 100 bases:

>100_bases
CTGGCTCCGAAGGTGCCTGTCCCCCTCCCTGCAACCCAGCCCCGAGAGCTGAAGGATTTTGGTAGAGGAAAAGCTAACCC
CTATAAGAAGGACGGCCACC

Downstream 100 bases:

>100_bases
GGGATCTCTTATGCCAAGGATAAAATCGCCCGCAGAATTGGAAGCATTCAGGAAAGCCATCCTGGCCAAAAGGGATGACA
AGAAGCCCTGCATCACGCTC

Product: benzoyl-CoA reductase electron transfer protein

Products: NA

Alternate protein names: NADH dehydrogenase I subunit E; NDH-1 subunit E [H]

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MCMDISKIDNIIDKHNAEQSSLIQILLDIQSEHNWLPKQALDRVGERLDVPMSRIQHITTFYKAFSQVPKGRHQIHVCMG
TACHVRGAQRVLDTISDAIGIKAGETDADLKFSLETVNCLGCCALGPVMVIDGEYHGNVAPAQSAEVLKNYE

Sequences:

>Translated_152_residues
MCMDISKIDNIIDKHNAEQSSLIQILLDIQSEHNWLPKQALDRVGERLDVPMSRIQHITTFYKAFSQVPKGRHQIHVCMG
TACHVRGAQRVLDTISDAIGIKAGETDADLKFSLETVNCLGCCALGPVMVIDGEYHGNVAPAQSAEVLKNYE
>Mature_152_residues
MCMDISKIDNIIDKHNAEQSSLIQILLDIQSEHNWLPKQALDRVGERLDVPMSRIQHITTFYKAFSQVPKGRHQIHVCMG
TACHVRGAQRVLDTISDAIGIKAGETDADLKFSLETVNCLGCCALGPVMVIDGEYHGNVAPAQSAEVLKNYE

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG1905

COG function: function code C; NADH:ubiquinone oxidoreductase 24 kD subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 24 kDa subunit family [H]

Homologues:

Organism=Homo sapiens, GI222080062, Length=141, Percent_Identity=32.6241134751773, Blast_Score=98, Evalue=3e-21,
Organism=Escherichia coli, GI1788621, Length=145, Percent_Identity=30.3448275862069, Blast_Score=93, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17561328, Length=141, Percent_Identity=36.8794326241135, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI18859877, Length=133, Percent_Identity=32.3308270676692, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI21355353, Length=134, Percent_Identity=27.6119402985075, Blast_Score=73, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 16801; Mature: 16801

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS01099 COMPLEX1_24K ; PS01047 HMA_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCMDISKIDNIIDKHNAEQSSLIQILLDIQSEHNWLPKQALDRVGERLDVPMSRIQHITT
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
FYKAFSQVPKGRHQIHVCMGTACHVRGAQRVLDTISDAIGIKAGETDADLKFSLETVNCL
HHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHH
GCCALGPVMVIDGEYHGNVAPAQSAEVLKNYE
HHHHCCCEEEECCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MCMDISKIDNIIDKHNAEQSSLIQILLDIQSEHNWLPKQALDRVGERLDVPMSRIQHITT
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
FYKAFSQVPKGRHQIHVCMGTACHVRGAQRVLDTISDAIGIKAGETDADLKFSLETVNCL
HHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHH
GCCALGPVMVIDGEYHGNVAPAQSAEVLKNYE
HHHHCCCEEEECCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]