| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is bamG [H]
Identifier: 197117836
GI number: 197117836
Start: 1675091
End: 1675549
Strand: Direct
Name: bamG [H]
Synonym: Gbem_1449
Alternate gene names: 197117836
Gene position: 1675091-1675549 (Clockwise)
Preceding gene: 308535239
Following gene: 197117837
Centisome position: 36.3
GC content: 61.0
Gene sequence:
>459_bases ATGTGCATGGATATCTCGAAGATAGACAACATCATAGACAAGCATAACGCCGAGCAGAGCTCGCTGATCCAGATCCTTTT GGACATCCAGAGCGAGCACAACTGGCTCCCGAAACAGGCCCTGGACCGCGTCGGCGAGAGGCTGGACGTGCCGATGAGCC GGATCCAGCACATCACCACCTTCTACAAGGCCTTCAGCCAGGTCCCCAAGGGGCGCCACCAGATCCATGTCTGCATGGGC ACCGCCTGCCACGTCCGTGGCGCGCAGAGGGTCCTGGACACCATCTCCGACGCGATCGGGATCAAGGCCGGCGAGACCGA CGCGGACCTCAAGTTCAGCCTCGAAACCGTGAACTGCCTGGGATGCTGCGCGCTGGGGCCGGTCATGGTCATCGACGGCG AGTATCATGGCAACGTGGCGCCTGCGCAGTCGGCCGAAGTGCTGAAAAACTACGAGTAA
Upstream 100 bases:
>100_bases CTGGCTCCGAAGGTGCCTGTCCCCCTCCCTGCAACCCAGCCCCGAGAGCTGAAGGATTTTGGTAGAGGAAAAGCTAACCC CTATAAGAAGGACGGCCACC
Downstream 100 bases:
>100_bases GGGATCTCTTATGCCAAGGATAAAATCGCCCGCAGAATTGGAAGCATTCAGGAAAGCCATCCTGGCCAAAAGGGATGACA AGAAGCCCTGCATCACGCTC
Product: benzoyl-CoA reductase electron transfer protein
Products: NA
Alternate protein names: NADH dehydrogenase I subunit E; NDH-1 subunit E [H]
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MCMDISKIDNIIDKHNAEQSSLIQILLDIQSEHNWLPKQALDRVGERLDVPMSRIQHITTFYKAFSQVPKGRHQIHVCMG TACHVRGAQRVLDTISDAIGIKAGETDADLKFSLETVNCLGCCALGPVMVIDGEYHGNVAPAQSAEVLKNYE
Sequences:
>Translated_152_residues MCMDISKIDNIIDKHNAEQSSLIQILLDIQSEHNWLPKQALDRVGERLDVPMSRIQHITTFYKAFSQVPKGRHQIHVCMG TACHVRGAQRVLDTISDAIGIKAGETDADLKFSLETVNCLGCCALGPVMVIDGEYHGNVAPAQSAEVLKNYE >Mature_152_residues MCMDISKIDNIIDKHNAEQSSLIQILLDIQSEHNWLPKQALDRVGERLDVPMSRIQHITTFYKAFSQVPKGRHQIHVCMG TACHVRGAQRVLDTISDAIGIKAGETDADLKFSLETVNCLGCCALGPVMVIDGEYHGNVAPAQSAEVLKNYE
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1905
COG function: function code C; NADH:ubiquinone oxidoreductase 24 kD subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I 24 kDa subunit family [H]
Homologues:
Organism=Homo sapiens, GI222080062, Length=141, Percent_Identity=32.6241134751773, Blast_Score=98, Evalue=3e-21, Organism=Escherichia coli, GI1788621, Length=145, Percent_Identity=30.3448275862069, Blast_Score=93, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17561328, Length=141, Percent_Identity=36.8794326241135, Blast_Score=103, Evalue=3e-23, Organism=Drosophila melanogaster, GI18859877, Length=133, Percent_Identity=32.3308270676692, Blast_Score=100, Evalue=6e-22, Organism=Drosophila melanogaster, GI21355353, Length=134, Percent_Identity=27.6119402985075, Blast_Score=73, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002023 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01257 Complex1_24kDa [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 16801; Mature: 16801
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS01099 COMPLEX1_24K ; PS01047 HMA_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCMDISKIDNIIDKHNAEQSSLIQILLDIQSEHNWLPKQALDRVGERLDVPMSRIQHITT CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH FYKAFSQVPKGRHQIHVCMGTACHVRGAQRVLDTISDAIGIKAGETDADLKFSLETVNCL HHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHH GCCALGPVMVIDGEYHGNVAPAQSAEVLKNYE HHHHCCCEEEECCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MCMDISKIDNIIDKHNAEQSSLIQILLDIQSEHNWLPKQALDRVGERLDVPMSRIQHITT CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHH FYKAFSQVPKGRHQIHVCMGTACHVRGAQRVLDTISDAIGIKAGETDADLKFSLETVNCL HHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHH GCCALGPVMVIDGEYHGNVAPAQSAEVLKNYE HHHHCCCEEEECCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]