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The map label for this gene is badM [H]

Identifier: 197117827

GI number: 197117827

Start: 1664246

End: 1664710

Strand: Reverse

Name: badM [H]

Synonym: Gbem_1440

Alternate gene names: 197117827

Gene position: 1664710-1664246 (Counterclockwise)

Preceding gene: 197117828

Following gene: 197117816

Centisome position: 36.07

GC content: 63.66

Gene sequence:

>465_bases
ATGAAGCTAAACAAGGCAAGCCTTTTCGCGCTTATCTCCGTCCTGGAACTGGCCAGAGACCCGGAGCGGCAGCTTTCCAC
CTCGGACATCGCCGACAAGTACGGCATTTCCTCGCACCACCTGGCCAAGGTGATGCGCAACCTCGTGCACCAGGGAGTGG
TCCAGGCGATGCGCGGCGTAGGGGGCGGTTACCGCTTCGCCGGCAACGTCAACCGCACCACCTTGCTCGACATCATCCAG
CTCTTCGAAACGCTGGAGAGCGAACTGGATCTCCCCCACTGGAACAAGGCGGCGGAGCCGGTGGTCTCCGAGCTGCACAG
CGTGACCAGCGAGATCGACACCGTTACCCGCGCCATCCTCGACACCGTCACCCTGGCCACGGTGCTGAAGAACACCAGGG
CCACAGGCGAAGGTGCGGCGGAGGCGAGCCCGCCGGGCAGGATCTCAAAAGCGGCTGCAGGTTGA

Upstream 100 bases:

>100_bases
TTCTTCCGCGGCATGGGGTTGCGGACCGGGCGCTACGTCGAGCTGGAAAAACGAATCGACTGACGGCGCCACGGGCGCCT
CTATTTGGAGCGAGACGATC

Downstream 100 bases:

>100_bases
GAGGGGCCCGCCCCCTCAACCGCTCTCATCTCCTCCTCAGTCCCCCCTCCCGCAGGTGGAGGGGGAACTGAAAGGCGCCT
GCTTCCCTACCCCCCCCCTT

Product: Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKLNKASLFALISVLELARDPERQLSTSDIADKYGISSHHLAKVMRNLVHQGVVQAMRGVGGGYRFAGNVNRTTLLDIIQ
LFETLESELDLPHWNKAAEPVVSELHSVTSEIDTVTRAILDTVTLATVLKNTRATGEGAAEASPPGRISKAAAG

Sequences:

>Translated_154_residues
MKLNKASLFALISVLELARDPERQLSTSDIADKYGISSHHLAKVMRNLVHQGVVQAMRGVGGGYRFAGNVNRTTLLDIIQ
LFETLESELDLPHWNKAAEPVVSELHSVTSEIDTVTRAILDTVTLATVLKNTRATGEGAAEASPPGRISKAAAG
>Mature_154_residues
MKLNKASLFALISVLELARDPERQLSTSDIADKYGISSHHLAKVMRNLVHQGVVQAMRGVGGGYRFAGNVNRTTLLDIIQ
LFETLESELDLPHWNKAAEPVVSELHSVTSEIDTVTRAILDTVTLATVLKNTRATGEGAAEASPPGRISKAAAG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16530; Mature: 16530

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNKASLFALISVLELARDPERQLSTSDIADKYGISSHHLAKVMRNLVHQGVVQAMRGV
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
GGGYRFAGNVNRTTLLDIIQLFETLESELDLPHWNKAAEPVVSELHSVTSEIDTVTRAIL
CCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DTVTLATVLKNTRATGEGAAEASPPGRISKAAAG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MKLNKASLFALISVLELARDPERQLSTSDIADKYGISSHHLAKVMRNLVHQGVVQAMRGV
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
GGGYRFAGNVNRTTLLDIIQLFETLESELDLPHWNKAAEPVVSELHSVTSEIDTVTRAIL
CCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DTVTLATVLKNTRATGEGAAEASPPGRISKAAAG
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9177244 [H]