| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cat2 [H]
Identifier: 197117806
GI number: 197117806
Start: 1634946
End: 1636283
Strand: Direct
Name: cat2 [H]
Synonym: Gbem_1418
Alternate gene names: 197117806
Gene position: 1634946-1636283 (Clockwise)
Preceding gene: 197117805
Following gene: 197117807
Centisome position: 35.43
GC content: 63.3
Gene sequence:
>1338_bases ATGGCTGCAACGATCTGGAAGGAAATCAAGAACTGGCGCGAGATCTACAACTCGCGCGTCACCACCGCCGACGAGGCGCT CAAATCGGTCAACTCCGGGGACCGTCTCTACCTGACCGGCAACGCCTCCGTTCCCCTGCAACTTTTGGATGCGCTGGTGA GGCGTGCGCCGGAGCTGCGCGATGTCGAGGTCTCCCAGGTGCTCACCATCTGCCCTCAGGACTACGTCTCGCCCGAGATG CAGGGGCACGTGCGGGTCAACACCATGTTCATCAGTCCCAACGTCCGCCAGGCGGTAAACGAAGGGCGCGCCGACTTCAC CCCGGTGCTCCTCTCCGAGTTCCCCCTGCTCTTCAAAAACGGCCATCTCCCGCTGGATGTGGCGCTTTTGAACGTCTCCT TGCCCGATGAAAACGGTTTCTGTTCGCTGGGGGGAGAGGCCGGCCTCACCATGACGGCGGCCGAGTCGGCGCGGATCGTC ATCGCCCAGGTGAACAAGAAGATGCCGCGCACGCTCGGGGACACCTTCTTCCACGTCTCGCGCATGACCCATATCGTCGA GGTGGATGCGCCGCTGACAGAAAGGCACATGGCGGAGGAGGGAGACCCCGAGATCGTCGAGCAGATAGCGGGGCACATCT CCAGCCTCATCCCCGATGGCGCCACCATGCAGCTTGGCATCGGCGCCATTCCCGACGCGGTCTTGAAGCACCTGTTCAGC AAGAAGGACCTGGGGATCCATTCCGAACTGATCTCCGACGGCGTCATCGACCTGGTGGAGGCCGGCGTCGTCAACTGCTC CAGGAAGACCCTGCACCCGGGCAAGATCGTCTGCGGCTTCCTCCTTGGGACCAAGCGTCTCTACGACTGGGCGCACAACA ACCCGATGATTGAGCTGCGCCGCACCGAGTACGTGAACGACCCATTCGTGGTGGCGCAAAACGACCGCATGGTCTCGGTG AACGCCGCCATCGAGGTCGACTTCACCGGGCAGATCTGCGCGGACAGCATCGGCCCCAGGATGTACTCGGCGGTCGGCGG TCAGATGGATTTCGTCTACGGCGCGTCCCGCTCCAAGGGAGGCGTCGCGGTGATCACCATGCCGAGCACCTCGACCCTCA GGGACGGATCCGTGGTCAGCAAGATCACGCCGCTTTTGAAGCACGGGGCCGGCGTGGTGACCAGCCGCAACCACGTGCGC TACCTGGTGACCGAATACGGCGCGGCTGACCTCTACGCGAAAAGCGTCCGCCAGCGCACCCAGGCCCTGATAGGCGTCGC CCACCCCATGTTCCGGGAGGAGCTGACCGAGAAGGCGAAGGAACTCAGGTACATCTAA
Upstream 100 bases:
>100_bases GCGGGCTACCTGGGACGCAAGGCGGGACGAGGGTTCTACGAGTACCCGGCCAGCTGAAAAAACGTCGATAAATCGATCCA ACCGAAATAGGAGGCCTACC
Downstream 100 bases:
>100_bases AAACCGGACGGGCAGGTGCAGCGCCGCCTGCCCGTCCACCGCACAGCCAGCCGATACGGCCAACGCGATAAAGGAACCTC AACCATGAAAAAGATAATCT
Product: butyryl:4-hydroxybutyrate CoA transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MAATIWKEIKNWREIYNSRVTTADEALKSVNSGDRLYLTGNASVPLQLLDALVRRAPELRDVEVSQVLTICPQDYVSPEM QGHVRVNTMFISPNVRQAVNEGRADFTPVLLSEFPLLFKNGHLPLDVALLNVSLPDENGFCSLGGEAGLTMTAAESARIV IAQVNKKMPRTLGDTFFHVSRMTHIVEVDAPLTERHMAEEGDPEIVEQIAGHISSLIPDGATMQLGIGAIPDAVLKHLFS KKDLGIHSELISDGVIDLVEAGVVNCSRKTLHPGKIVCGFLLGTKRLYDWAHNNPMIELRRTEYVNDPFVVAQNDRMVSV NAAIEVDFTGQICADSIGPRMYSAVGGQMDFVYGASRSKGGVAVITMPSTSTLRDGSVVSKITPLLKHGAGVVTSRNHVR YLVTEYGAADLYAKSVRQRTQALIGVAHPMFREELTEKAKELRYI
Sequences:
>Translated_445_residues MAATIWKEIKNWREIYNSRVTTADEALKSVNSGDRLYLTGNASVPLQLLDALVRRAPELRDVEVSQVLTICPQDYVSPEM QGHVRVNTMFISPNVRQAVNEGRADFTPVLLSEFPLLFKNGHLPLDVALLNVSLPDENGFCSLGGEAGLTMTAAESARIV IAQVNKKMPRTLGDTFFHVSRMTHIVEVDAPLTERHMAEEGDPEIVEQIAGHISSLIPDGATMQLGIGAIPDAVLKHLFS KKDLGIHSELISDGVIDLVEAGVVNCSRKTLHPGKIVCGFLLGTKRLYDWAHNNPMIELRRTEYVNDPFVVAQNDRMVSV NAAIEVDFTGQICADSIGPRMYSAVGGQMDFVYGASRSKGGVAVITMPSTSTLRDGSVVSKITPLLKHGAGVVTSRNHVR YLVTEYGAADLYAKSVRQRTQALIGVAHPMFREELTEKAKELRYI >Mature_444_residues AATIWKEIKNWREIYNSRVTTADEALKSVNSGDRLYLTGNASVPLQLLDALVRRAPELRDVEVSQVLTICPQDYVSPEMQ GHVRVNTMFISPNVRQAVNEGRADFTPVLLSEFPLLFKNGHLPLDVALLNVSLPDENGFCSLGGEAGLTMTAAESARIVI AQVNKKMPRTLGDTFFHVSRMTHIVEVDAPLTERHMAEEGDPEIVEQIAGHISSLIPDGATMQLGIGAIPDAVLKHLFSK KDLGIHSELISDGVIDLVEAGVVNCSRKTLHPGKIVCGFLLGTKRLYDWAHNNPMIELRRTEYVNDPFVVAQNDRMVSVN AAIEVDFTGQICADSIGPRMYSAVGGQMDFVYGASRSKGGVAVITMPSTSTLRDGSVVSKITPLLKHGAGVVTSRNHVRY LVTEYGAADLYAKSVRQRTQALIGVAHPMFREELTEKAKELRYI
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=473, Percent_Identity=23.0443974630021, Blast_Score=73, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17538151, Length=433, Percent_Identity=43.64896073903, Blast_Score=348, Evalue=3e-96, Organism=Caenorhabditis elegans, GI32563853, Length=428, Percent_Identity=41.3551401869159, Blast_Score=337, Evalue=6e-93, Organism=Saccharomyces cerevisiae, GI6319456, Length=393, Percent_Identity=23.6641221374046, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI21358615, Length=428, Percent_Identity=45.0934579439252, Blast_Score=366, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 48775; Mature: 48643
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATIWKEIKNWREIYNSRVTTADEALKSVNSGDRLYLTGNASVPLQLLDALVRRAPELR CCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC DVEVSQVLTICPQDYVSPEMQGHVRVNTMFISPNVRQAVNEGRADFTPVLLSEFPLLFKN CCCHHHHHHHCCHHHCCCCCCCCEEEEEEEECCCHHHHHHCCCCCCCHHHHHCCCCEEEC GHLPLDVALLNVSLPDENGFCSLGGEAGLTMTAAESARIVIAQVNKKMPRTLGDTFFHVS CCCCEEEEEEEEECCCCCCCEECCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHH RMTHIVEVDAPLTERHMAEEGDPEIVEQIAGHISSLIPDGATMQLGIGAIPDAVLKHLFS HHHEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHC KKDLGIHSELISDGVIDLVEAGVVNCSRKTLHPGKIVCGFLLGTKRLYDWAHNNPMIELR CCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE RTEYVNDPFVVAQNDRMVSVNAAIEVDFTGQICADSIGPRMYSAVGGQMDFVYGASRSKG CCCCCCCCEEEECCCEEEEEEEEEEEECCCHHHHHHCCHHHHHHHCCCEEEEEECCCCCC GVAVITMPSTSTLRDGSVVSKITPLLKHGAGVVTSRNHVRYLVTEYGAADLYAKSVRQRT CEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHH QALIGVAHPMFREELTEKAKELRYI HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AATIWKEIKNWREIYNSRVTTADEALKSVNSGDRLYLTGNASVPLQLLDALVRRAPELR CHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC DVEVSQVLTICPQDYVSPEMQGHVRVNTMFISPNVRQAVNEGRADFTPVLLSEFPLLFKN CCCHHHHHHHCCHHHCCCCCCCCEEEEEEEECCCHHHHHHCCCCCCCHHHHHCCCCEEEC GHLPLDVALLNVSLPDENGFCSLGGEAGLTMTAAESARIVIAQVNKKMPRTLGDTFFHVS CCCCEEEEEEEEECCCCCCCEECCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHH RMTHIVEVDAPLTERHMAEEGDPEIVEQIAGHISSLIPDGATMQLGIGAIPDAVLKHLFS HHHEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHC KKDLGIHSELISDGVIDLVEAGVVNCSRKTLHPGKIVCGFLLGTKRLYDWAHNNPMIELR CCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE RTEYVNDPFVVAQNDRMVSVNAAIEVDFTGQICADSIGPRMYSAVGGQMDFVYGASRSKG CCCCCCCCEEEECCCEEEEEEEEEEEECCCHHHHHHCCHHHHHHHCCCEEEEEECCCCCC GVAVITMPSTSTLRDGSVVSKITPLLKHGAGVVTSRNHVRYLVTEYGAADLYAKSVRQRT CEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHH QALIGVAHPMFREELTEKAKELRYI HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]