| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117788
Identifier: 197117788
GI number: 197117788
Start: 1614340
End: 1614795
Strand: Direct
Name: 197117788
Synonym: Gbem_1400
Alternate gene names: NA
Gene position: 1614340-1614795 (Clockwise)
Preceding gene: 197117786
Following gene: 197117795
Centisome position: 34.98
GC content: 53.51
Gene sequence:
>456_bases ATGTCAGGAACAAGAATGGGGCGTTTGGTACGTGGGACGATTGCTGCAGGTGCAGTGCTGGTGGGGTCTGTGGCTTTCTT CGGCTGCTCCAAAGTCGAGACGGCGAAGATCGAGGGCGGCGTCGTCACCATACCCGTTGCCAAAGTGACTGAGCAAGCGA AGTTCTACAAATACGTCGATAACGGGAAAGAGATCAGTTATTTCGTGGCCAAAGCCCCGGACGGAAGTTACAAAGCCGCT TTTAACGCCTGTGATTCCTGCTTTCGCGAAAAGAAAGGGTATGAACAGCAAGGCAGCGTGATGAACTGCATAAACTGCAA CCAGAAGTTCGCCATCGACCGTCTTGGTCCCAACGCCACTGGCGGCTGCAACCCCGGTTATCTCCCGATAGAGGTCAAAG GCGATGCCATTACTATCCCGGAGAGCACCCTGAAGGGTGGGGCAAAATACTTCTAA
Upstream 100 bases:
>100_bases AATCCTGAATTCGGATACTTAGAGGTAGCGACTCGTGCTGGCATGGTTGATGTAAGGTTTTGGGGGCCGCGAAAAAATAA CGGGAATATAGGAGATCTTC
Downstream 100 bases:
>100_bases ATAATCTGCATCGGCAGAGCCGGAACTATTTCCCGAATACCTTGCGCAGCAGCTCGGTTCCCCTGGCCGCCGGGTCGGTC CGTATCTTCTTTTCCTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSGTRMGRLVRGTIAAGAVLVGSVAFFGCSKVETAKIEGGVVTIPVAKVTEQAKFYKYVDNGKEISYFVAKAPDGSYKAA FNACDSCFREKKGYEQQGSVMNCINCNQKFAIDRLGPNATGGCNPGYLPIEVKGDAITIPESTLKGGAKYF
Sequences:
>Translated_151_residues MSGTRMGRLVRGTIAAGAVLVGSVAFFGCSKVETAKIEGGVVTIPVAKVTEQAKFYKYVDNGKEISYFVAKAPDGSYKAA FNACDSCFREKKGYEQQGSVMNCINCNQKFAIDRLGPNATGGCNPGYLPIEVKGDAITIPESTLKGGAKYF >Mature_150_residues SGTRMGRLVRGTIAAGAVLVGSVAFFGCSKVETAKIEGGVVTIPVAKVTEQAKFYKYVDNGKEISYFVAKAPDGSYKAAF NACDSCFREKKGYEQQGSVMNCINCNQKFAIDRLGPNATGGCNPGYLPIEVKGDAITIPESTLKGGAKYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16028; Mature: 15896
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTRMGRLVRGTIAAGAVLVGSVAFFGCSKVETAKIEGGVVTIPVAKVTEQAKFYKYVD CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHC NGKEISYFVAKAPDGSYKAAFNACDSCFREKKGYEQQGSVMNCINCNQKFAIDRLGPNAT CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCC GGCNPGYLPIEVKGDAITIPESTLKGGAKYF CCCCCCEEEEEECCCEEECCHHHHCCCCCCC >Mature Secondary Structure SGTRMGRLVRGTIAAGAVLVGSVAFFGCSKVETAKIEGGVVTIPVAKVTEQAKFYKYVD CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHC NGKEISYFVAKAPDGSYKAAFNACDSCFREKKGYEQQGSVMNCINCNQKFAIDRLGPNAT CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCC GGCNPGYLPIEVKGDAITIPESTLKGGAKYF CCCCCCEEEEEECCCEEECCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA