| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117780
Identifier: 197117780
GI number: 197117780
Start: 1606456
End: 1606725
Strand: Direct
Name: 197117780
Synonym: Gbem_1392
Alternate gene names: NA
Gene position: 1606456-1606725 (Clockwise)
Preceding gene: 197117779
Following gene: 308535236
Centisome position: 34.81
GC content: 57.78
Gene sequence:
>270_bases ATGTCCATCAGAAGAGGAGACGTAGTCAGCCATTGCTCTGCAGTTGAATGGGGGGTCGGAAAAGTGGTCGAGGTCAGCGA TTACCGCGTATCTATCCACTTCAACGACGGGACCACCCGCAAGATCGCCAGCACCCATTTTGCCAGCCTGGTGCCGGCCG AGCCCGGTTCGTATATTGCGGCCAATCCGGTGGTCGAAAAAGATGGGATCAAGGCCAAGGCTCCGCGCAAAAAGGCTGTT ACCGCCAAGCAGGCGGCCGGCGCCAAATAA
Upstream 100 bases:
>100_bases GTTCGAACCCGCTTTCGACCTCGCAAGCCGCCGGCATGCGTATGGTAGCGATCCGGGTCATTCGAAGTAAACGTTGCTAA CCAGGTAAGGGAGAATCGAG
Downstream 100 bases:
>100_bases CCCGACCTAAAACACGATGACAAGGGGGCAGCCTCTGGCATGACGCATTTGTCCTGCCAGTTGGCCGCCCCTTTTTTTTT CGCCCACGACAGGCGGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSIRRGDVVSHCSAVEWGVGKVVEVSDYRVSIHFNDGTTRKIASTHFASLVPAEPGSYIAANPVVEKDGIKAKAPRKKAV TAKQAAGAK
Sequences:
>Translated_89_residues MSIRRGDVVSHCSAVEWGVGKVVEVSDYRVSIHFNDGTTRKIASTHFASLVPAEPGSYIAANPVVEKDGIKAKAPRKKAV TAKQAAGAK >Mature_88_residues SIRRGDVVSHCSAVEWGVGKVVEVSDYRVSIHFNDGTTRKIASTHFASLVPAEPGSYIAANPVVEKDGIKAKAPRKKAVT AKQAAGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9420; Mature: 9289
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRRGDVVSHCSAVEWGVGKVVEVSDYRVSIHFNDGTTRKIASTHFASLVPAEPGSYIA CCCCCCCCCHHCCCCCCCCCCEEEECCEEEEEEECCCCCEEECCCCHHEECCCCCCCEEE ANPVVEKDGIKAKAPRKKAVTAKQAAGAK ECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SIRRGDVVSHCSAVEWGVGKVVEVSDYRVSIHFNDGTTRKIASTHFASLVPAEPGSYIA CCCCCCCCHHCCCCCCCCCCEEEECCEEEEEEECCCCCEEECCCCHHEECCCCCCCEEE ANPVVEKDGIKAKAPRKKAVTAKQAAGAK ECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA