| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117752
Identifier: 197117752
GI number: 197117752
Start: 1572318
End: 1572662
Strand: Direct
Name: 197117752
Synonym: Gbem_1364
Alternate gene names: NA
Gene position: 1572318-1572662 (Clockwise)
Preceding gene: 197117748
Following gene: 197117753
Centisome position: 34.07
GC content: 57.68
Gene sequence:
>345_bases ATGGGACACAAAGAAAGCTGCACAGGAGGGGATGCCGTCTTTCTGTTGGTCGGCGGCTTGATCGGTGCCGGGCTGGCGCT CCTGATGGCCCCGCAGGCGGGAAAGAAGACCAGGCAATACCTCTCTTCGCTGGCCGAAGAGGTGACCGGCAAAGCTAATG AAGCTGTTTCGGATTTCGCCGAAACCGTCTCGGATTTCGTCGATACCGCGACCAGCCGCGCCACCGAATTCGTGGAGGAG AAGGCGAACCTCAGCAAGGATTCCAAAAAGATGCTGCTGTCCGCCCTCGACATGGCGCTGGAAAAGCTGGAAGAGCAGAG GAAGAAGCTCGAGAAGAGCATATAG
Upstream 100 bases:
>100_bases AAAATCCTGGCGCAGAAGAAAAGGCTTTACATTTGAAGAATTTAATTTTGTGGTAGTATTACCGCTGTAATTAAAACCAC CCGGATCAAGGAGAAAACTA
Downstream 100 bases:
>100_bases GCGTCGTAGCAAAACCAATCCAAAAACGAGGAGGTATTACCATGGCACGAGAGCCTTGGGTCGATCAGGATGTATGCATC AGTTGCGGTCTTTGCACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MGHKESCTGGDAVFLLVGGLIGAGLALLMAPQAGKKTRQYLSSLAEEVTGKANEAVSDFAETVSDFVDTATSRATEFVEE KANLSKDSKKMLLSALDMALEKLEEQRKKLEKSI
Sequences:
>Translated_114_residues MGHKESCTGGDAVFLLVGGLIGAGLALLMAPQAGKKTRQYLSSLAEEVTGKANEAVSDFAETVSDFVDTATSRATEFVEE KANLSKDSKKMLLSALDMALEKLEEQRKKLEKSI >Mature_113_residues GHKESCTGGDAVFLLVGGLIGAGLALLMAPQAGKKTRQYLSSLAEEVTGKANEAVSDFAETVSDFVDTATSRATEFVEEK ANLSKDSKKMLLSALDMALEKLEEQRKKLEKSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12196; Mature: 12065
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHKESCTGGDAVFLLVGGLIGAGLALLMAPQAGKKTRQYLSSLAEEVTGKANEAVSDFA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH ETVSDFVDTATSRATEFVEEKANLSKDSKKMLLSALDMALEKLEEQRKKLEKSI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GHKESCTGGDAVFLLVGGLIGAGLALLMAPQAGKKTRQYLSSLAEEVTGKANEAVSDFA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH ETVSDFVDTATSRATEFVEEKANLSKDSKKMLLSALDMALEKLEEQRKKLEKSI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA