| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is dhaT [H]
Identifier: 197117741
GI number: 197117741
Start: 1559749
End: 1560912
Strand: Reverse
Name: dhaT [H]
Synonym: Gbem_1353
Alternate gene names: 197117741
Gene position: 1560912-1559749 (Counterclockwise)
Preceding gene: 197117749
Following gene: 197117740
Centisome position: 33.82
GC content: 61.25
Gene sequence:
>1164_bases ATGGCATTAGGAGAGCAGACGTACGGTTTCTACATTCCGACAGTATCACTGATGGGTATTGGTTCCGCTAAAGAGACCGG TGGCCAGATCAAGGCACTGGGCGCATCCAAGGCGCTGATCGTTACCGACAAAGGCCTCTCGGCCATGGGCGTTGCCGACA AGATCAAATCCCAGGTTGAAGAGGCCGGTGTTTCCGCAGTCATCTTCGACGGCGCAGAGCCCAACCCGACCGACATCAAC GTGCACGACGGCGTGAAGGTGTACCAGGACAACGGCTGTGACGCGATCATCTCCCTGGGCGGCGGTTCCTCCCATGACTG CGCTAAAGGCATCGGCATGGTCATCGGCAACGGCGGCCACATCCGCGATCTCGAAGGCGTGAACAAGACCACCAAGCCGA TGCCGGCATTCGTGGCCATCAACACCACCGCAGGCACCGCGTCCGAAATGACCCGTTTCTGCATCATCACCAACACCGAC ACCCACGTGAAGATGGCGATCGTCGACTGGCGCTGCACCCCGAACGTCGCGATCAACGACCCGCTGCTCATGGTCGGCAA GCCGGCGGCACTGACCGCGGCAACCGGCATGGACGCACTGACCCACGCCGTCGAGGCGTACGTGTCCACCATCGCTACCC CGATCACCGACGCTTGCGCCATCAAGGCAATCGAGCTGATCGCCGAGTTCCTCTCCAAGGCAGTTGCCAACGGCGAAGAC CTCGAGGCGCGCGACAAGATGGCTTACGCCGAGTACCTGGCCGGCATGGCGTTCAACAACGCATCGCTTGGCTACGTTCA CTCCATGGCTCACCAGCTGGGCGGCTTCTACAACCTGCCGCACGGCGTCTGCAACGCCATCCTGCTCCCGGCCGTCAGCC AGTACAACCTGATCGCTTGCCCGAAGCGTTTCGCCGACATCGCGAAAGCCCTCGGCGAGAACATCGACGGCCTCTCCGTG ACCGAAGCAGGCCAGAAGGCAATCGACAGGATCCGCACCCTCTCCGCTTCCATCGGCATCCCGACCGGCCTCAAGGCCCT CAACGTCAAGGAAGCCGACCTCACCATCATGGCTGAGAACGCGAAGAAGGACGCTTGCCAGTTCACCAACCCGCGCAAGG CAACCCTTGAGCAGGTCGTCCAGATCTTCAAGGACGCAATGTAA
Upstream 100 bases:
>100_bases ACCTAGAAAACCGTTTTAGGACAGTGTATGCAACTTGGACCTACGCAATGGTTAAACAACCGGGCTTGAAATCCGGACAC AACAACAGGGGGAAAGACAA
Downstream 100 bases:
>100_bases GAACCAGCAGCATAGCAGCAAAGCTCCCCTCCCCCTGGCGGGGGAGGGGTTTTGAATCTCCGAGCCATGCGCCGCCTAAA AGGGACCACCCTCACGGAGC
Product: ethanol dehydrogenase
Products: NA
Alternate protein names: 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase [H]
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MALGEQTYGFYIPTVSLMGIGSAKETGGQIKALGASKALIVTDKGLSAMGVADKIKSQVEEAGVSAVIFDGAEPNPTDIN VHDGVKVYQDNGCDAIISLGGGSSHDCAKGIGMVIGNGGHIRDLEGVNKTTKPMPAFVAINTTAGTASEMTRFCIITNTD THVKMAIVDWRCTPNVAINDPLLMVGKPAALTAATGMDALTHAVEAYVSTIATPITDACAIKAIELIAEFLSKAVANGED LEARDKMAYAEYLAGMAFNNASLGYVHSMAHQLGGFYNLPHGVCNAILLPAVSQYNLIACPKRFADIAKALGENIDGLSV TEAGQKAIDRIRTLSASIGIPTGLKALNVKEADLTIMAENAKKDACQFTNPRKATLEQVVQIFKDAM
Sequences:
>Translated_387_residues MALGEQTYGFYIPTVSLMGIGSAKETGGQIKALGASKALIVTDKGLSAMGVADKIKSQVEEAGVSAVIFDGAEPNPTDIN VHDGVKVYQDNGCDAIISLGGGSSHDCAKGIGMVIGNGGHIRDLEGVNKTTKPMPAFVAINTTAGTASEMTRFCIITNTD THVKMAIVDWRCTPNVAINDPLLMVGKPAALTAATGMDALTHAVEAYVSTIATPITDACAIKAIELIAEFLSKAVANGED LEARDKMAYAEYLAGMAFNNASLGYVHSMAHQLGGFYNLPHGVCNAILLPAVSQYNLIACPKRFADIAKALGENIDGLSV TEAGQKAIDRIRTLSASIGIPTGLKALNVKEADLTIMAENAKKDACQFTNPRKATLEQVVQIFKDAM >Mature_386_residues ALGEQTYGFYIPTVSLMGIGSAKETGGQIKALGASKALIVTDKGLSAMGVADKIKSQVEEAGVSAVIFDGAEPNPTDINV HDGVKVYQDNGCDAIISLGGGSSHDCAKGIGMVIGNGGHIRDLEGVNKTTKPMPAFVAINTTAGTASEMTRFCIITNTDT HVKMAIVDWRCTPNVAINDPLLMVGKPAALTAATGMDALTHAVEAYVSTIATPITDACAIKAIELIAEFLSKAVANGEDL EARDKMAYAEYLAGMAFNNASLGYVHSMAHQLGGFYNLPHGVCNAILLPAVSQYNLIACPKRFADIAKALGENIDGLSVT EAGQKAIDRIRTLSASIGIPTGLKALNVKEADLTIMAENAKKDACQFTNPRKATLEQVVQIFKDAM
Specific function: Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=380, Percent_Identity=27.3684210526316, Blast_Score=140, Evalue=2e-33, Organism=Escherichia coli, GI48994951, Length=378, Percent_Identity=56.0846560846561, Blast_Score=441, Evalue=1e-125, Organism=Escherichia coli, GI1789163, Length=374, Percent_Identity=43.3155080213904, Blast_Score=297, Evalue=1e-81, Organism=Escherichia coli, GI87082107, Length=382, Percent_Identity=35.3403141361257, Blast_Score=228, Evalue=6e-61, Organism=Escherichia coli, GI1787493, Length=383, Percent_Identity=34.9869451697128, Blast_Score=208, Evalue=4e-55, Organism=Escherichia coli, GI1789386, Length=348, Percent_Identity=25.5747126436782, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17537053, Length=424, Percent_Identity=24.2924528301887, Blast_Score=126, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6321181, Length=381, Percent_Identity=52.49343832021, Blast_Score=390, Evalue=1e-109, Organism=Drosophila melanogaster, GI24657991, Length=425, Percent_Identity=25.8823529411765, Blast_Score=140, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.202 [H]
Molecular weight: Translated: 40522; Mature: 40391
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGEQTYGFYIPTVSLMGIGSAKETGGQIKALGASKALIVTDKGLSAMGVADKIKSQVE CCCCCCCCEEEECCEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHH EAGVSAVIFDGAEPNPTDINVHDGVKVYQDNGCDAIISLGGGSSHDCAKGIGMVIGNGGH HCCCEEEEECCCCCCCCEEEECCCEEEEECCCCEEEEEECCCCCCHHHHCCCEEEECCCC IRDLEGVNKTTKPMPAFVAINTTAGTASEMTRFCIITNTDTHVKMAIVDWRCTPNVAIND EECCCCCCCCCCCCCEEEEEECCCCCHHHCEEEEEEECCCCEEEEEEEEEECCCCCEECC PLLMVGKPAALTAATGMDALTHAVEAYVSTIATPITDACAIKAIELIAEFLSKAVANGED CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LEARDKMAYAEYLAGMAFNNASLGYVHSMAHQLGGFYNLPHGVCNAILLPAVSQYNLIAC CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEC PKRFADIAKALGENIDGLSVTEAGQKAIDRIRTLSASIGIPTGLKALNVKEADLTIMAEN CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECC AKKDACQFTNPRKATLEQVVQIFKDAM CCCHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure ALGEQTYGFYIPTVSLMGIGSAKETGGQIKALGASKALIVTDKGLSAMGVADKIKSQVE CCCCCCCEEEECCEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHH EAGVSAVIFDGAEPNPTDINVHDGVKVYQDNGCDAIISLGGGSSHDCAKGIGMVIGNGGH HCCCEEEEECCCCCCCCEEEECCCEEEEECCCCEEEEEECCCCCCHHHHCCCEEEECCCC IRDLEGVNKTTKPMPAFVAINTTAGTASEMTRFCIITNTDTHVKMAIVDWRCTPNVAIND EECCCCCCCCCCCCCEEEEEECCCCCHHHCEEEEEEECCCCEEEEEEEEEECCCCCEECC PLLMVGKPAALTAATGMDALTHAVEAYVSTIATPITDACAIKAIELIAEFLSKAVANGED CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LEARDKMAYAEYLAGMAFNNASLGYVHSMAHQLGGFYNLPHGVCNAILLPAVSQYNLIAC CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEC PKRFADIAKALGENIDGLSVTEAGQKAIDRIRTLSASIGIPTGLKALNVKEADLTIMAEN CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECC AKKDACQFTNPRKATLEQVVQIFKDAM CCCHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7721705 [H]