| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117723
Identifier: 197117723
GI number: 197117723
Start: 1538602
End: 1539231
Strand: Direct
Name: 197117723
Synonym: Gbem_1335
Alternate gene names: NA
Gene position: 1538602-1539231 (Clockwise)
Preceding gene: 197117722
Following gene: 197117725
Centisome position: 33.34
GC content: 62.06
Gene sequence:
>630_bases ATGGACCAGGCTTGCGAACTGATACTGCCTCATGGAGGCTTCCGGAAGCTGCGTAGCTTCGCCGTTGCGCTGGCGGCTTA TGACGGCACCGTGCTTTTTTGCGACCGGTTTGTGCAGAAGCGCTCGCGCACCCACGACCAGATGGTGCAGGCCGCGCGCA GCGGGGTCCAGAACATAGCCGAAGGGTCGCTCGCCTCCGGGACTTCCAAAAAGACCGAGCTGAAGCTGACCGGCGTAGCT CGGGCCAGTCTGGGCGAGCTGATCAGGGACTACGAAGACTATCTGCGGCAGAACCGGCTGGAGATTTGGGACAAGGATTC GGCGCGCGTGCGCGCCATGCGGGCCAGGCTCGCCGGGAAGCTGAAAAGGGGAAAGGCATTGTCGGACCAGTCGGACAGGT CAGACAGGTCTGACAGGTCTGACAGGTCTGAGTTTTTCGACGAACCGCTGCTGTCTGCGCTGCAGGCGCTTCGTAGCGCC AGCGCGGAAGTGAGCGCCAACATCCTGCTCTGCTTGACGCACCAGGCAAGCTACCTGCTCAAGCGCCAGATGGACCGGCT GGCGAGTGACTTCGCCGAAAACGGCGGCTTCACCGAAAGGCTCTACCACTACCGTAAAGAGCACCGCTGA
Upstream 100 bases:
>100_bases CGGAGAGGTGGCCGACGTGCTGGTAGTTGCGGACGTGATGCAGTTCGTTCCAGCTCTCACCGCAAAGCTGGCTAAGTGAG GGCAACAACGAGGAGCCGGT
Downstream 100 bases:
>100_bases ATCCCTACTGCATCAACTCCAGAAAATCATCCTCGCTCAACACCCGCACGCCCAGCTGCTGCGCTTTATCCAGCTTGCTC CCGGCATCGGCGCCGGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MDQACELILPHGGFRKLRSFAVALAAYDGTVLFCDRFVQKRSRTHDQMVQAARSGVQNIAEGSLASGTSKKTELKLTGVA RASLGELIRDYEDYLRQNRLEIWDKDSARVRAMRARLAGKLKRGKALSDQSDRSDRSDRSDRSEFFDEPLLSALQALRSA SAEVSANILLCLTHQASYLLKRQMDRLASDFAENGGFTERLYHYRKEHR
Sequences:
>Translated_209_residues MDQACELILPHGGFRKLRSFAVALAAYDGTVLFCDRFVQKRSRTHDQMVQAARSGVQNIAEGSLASGTSKKTELKLTGVA RASLGELIRDYEDYLRQNRLEIWDKDSARVRAMRARLAGKLKRGKALSDQSDRSDRSDRSDRSEFFDEPLLSALQALRSA SAEVSANILLCLTHQASYLLKRQMDRLASDFAENGGFTERLYHYRKEHR >Mature_209_residues MDQACELILPHGGFRKLRSFAVALAAYDGTVLFCDRFVQKRSRTHDQMVQAARSGVQNIAEGSLASGTSKKTELKLTGVA RASLGELIRDYEDYLRQNRLEIWDKDSARVRAMRARLAGKLKRGKALSDQSDRSDRSDRSDRSEFFDEPLLSALQALRSA SAEVSANILLCLTHQASYLLKRQMDRLASDFAENGGFTERLYHYRKEHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23659; Mature: 23659
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQACELILPHGGFRKLRSFAVALAAYDGTVLFCDRFVQKRSRTHDQMVQAARSGVQNIA CCCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH EGSLASGTSKKTELKLTGVARASLGELIRDYEDYLRQNRLEIWDKDSARVRAMRARLAGK CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHH LKRGKALSDQSDRSDRSDRSDRSEFFDEPLLSALQALRSASAEVSANILLCLTHQASYLL HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCHHEEEEHHHHHHHH KRQMDRLASDFAENGGFTERLYHYRKEHR HHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MDQACELILPHGGFRKLRSFAVALAAYDGTVLFCDRFVQKRSRTHDQMVQAARSGVQNIA CCCCCCEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH EGSLASGTSKKTELKLTGVARASLGELIRDYEDYLRQNRLEIWDKDSARVRAMRARLAGK CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHH LKRGKALSDQSDRSDRSDRSDRSEFFDEPLLSALQALRSASAEVSANILLCLTHQASYLL HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCHHEEEEHHHHHHHH KRQMDRLASDFAENGGFTERLYHYRKEHR HHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA