| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is glcK [H]
Identifier: 197117714
GI number: 197117714
Start: 1529992
End: 1530912
Strand: Direct
Name: glcK [H]
Synonym: Gbem_1326
Alternate gene names: 197117714
Gene position: 1529992-1530912 (Clockwise)
Preceding gene: 197117713
Following gene: 197117715
Centisome position: 33.15
GC content: 70.03
Gene sequence:
>921_bases ATGGAAAGTGTCTGTATCGGGGTGGACGTCGGGGGGACTAACCTTCGCTTCGCCCTGGTGGACCAAGGCGGCGCGGTGCT TAGCAGGGTGAGCGAACCGACGGAGACGGTGACGGCTCCCGCGCCGTTTGTAGCCCGGCTGCAGGGGAGGGTGCAACAGC TGCAAAGGGAGGCGCTGGCCCGGGGAGTCAGGGTCGCCGGCGTCGGCATCGGTGTCGCCGGTCTCGTCTCGGGTGAAGGT GCGGTCCTTTCCAGCGTCAACCTCCCGGCGCTGCAGGGGGTAAACCTCGGCGCGGAGCTTTCGCGCGCCCTGGGGGTGCC GGTGCTGGTGCTAAACGACGCCAACGCCTGCGCCGTCGGCGAGCAGCGCTTCGGCGCGGGAAAAGGGTACCGCTCCTGGC TCATGCTCACCATCGGCACGGGGGTGGGGGCGGGGCTGATACTTGACGGCCGGCTCTGGACCGGGGCGAACGGGCTGGCC GGCGAATTGGGGCACCTGACGGTGGAACCGGAGGGGCGCCCGTGCGGCTGCGGCAACCGGGGGTGCCTGGAGCAGTACAC CTTTGCCACCGCCATTTCCGCGGGAAACGACAGCGCCGCTGCCGTCGCCCGGCGCGCGGTGAGCGGGGACGCCGCGGCTG TCGCCCGTTTTGAGGGGGCTGGCCGCTACTTGGGCATCGCCGTGGCCGGGGTGCTCAACCTGCTGAACCTGGAAGCGGTA GTGCTGGGAGGAGGGGTGTCAGAGAGTTTCGAGCTACTGGCCCCGGCGATGCGCCGGGAGATATGCTCCCGCACCCTTGC GCTTCCCGGGGCGGCCGCCTGCGTCGTCAAGGGCGCCCTCGGCCCGGACGCCGGTGTCCTGGGTGCTGCCCAAGCCGCCT TCGACGCCGAAAAAATTTCCTCGCGCTCCCACCTTTCCTGA
Upstream 100 bases:
>100_bases ACTTCATGACTGTGGTAGCGGACGTCAGGGTGATCCCGGAGGCGCTTTTGGCGACTTACGACCGGCTGCTACCGTTTTTC CAGGCGGCAGTGGAGGGGTG
Downstream 100 bases:
>100_bases AACATATGCTATAGTTGCCGCTGGCTCGGCCAGCAATTTTAATTAACTAGAATGGAGGCCTTATGTGGTTTACTCGGAGA ATCCTGGCAGCTTGTTTGTC
Product: ROK domain transcriptional regulator/sugar kinase
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MESVCIGVDVGGTNLRFALVDQGGAVLSRVSEPTETVTAPAPFVARLQGRVQQLQREALARGVRVAGVGIGVAGLVSGEG AVLSSVNLPALQGVNLGAELSRALGVPVLVLNDANACAVGEQRFGAGKGYRSWLMLTIGTGVGAGLILDGRLWTGANGLA GELGHLTVEPEGRPCGCGNRGCLEQYTFATAISAGNDSAAAVARRAVSGDAAAVARFEGAGRYLGIAVAGVLNLLNLEAV VLGGGVSESFELLAPAMRREICSRTLALPGAAACVVKGALGPDAGVLGAAQAAFDAEKISSRSHLS
Sequences:
>Translated_306_residues MESVCIGVDVGGTNLRFALVDQGGAVLSRVSEPTETVTAPAPFVARLQGRVQQLQREALARGVRVAGVGIGVAGLVSGEG AVLSSVNLPALQGVNLGAELSRALGVPVLVLNDANACAVGEQRFGAGKGYRSWLMLTIGTGVGAGLILDGRLWTGANGLA GELGHLTVEPEGRPCGCGNRGCLEQYTFATAISAGNDSAAAVARRAVSGDAAAVARFEGAGRYLGIAVAGVLNLLNLEAV VLGGGVSESFELLAPAMRREICSRTLALPGAAACVVKGALGPDAGVLGAAQAAFDAEKISSRSHLS >Mature_306_residues MESVCIGVDVGGTNLRFALVDQGGAVLSRVSEPTETVTAPAPFVARLQGRVQQLQREALARGVRVAGVGIGVAGLVSGEG AVLSSVNLPALQGVNLGAELSRALGVPVLVLNDANACAVGEQRFGAGKGYRSWLMLTIGTGVGAGLILDGRLWTGANGLA GELGHLTVEPEGRPCGCGNRGCLEQYTFATAISAGNDSAAAVARRAVSGDAAAVARFEGAGRYLGIAVAGVLNLLNLEAV VLGGGVSESFELLAPAMRREICSRTLALPGAAACVVKGALGPDAGVLGAAQAAFDAEKISSRSHLS
Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Homo sapiens, GI298566315, Length=282, Percent_Identity=32.2695035460993, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI4885285, Length=282, Percent_Identity=32.2695035460993, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI190014632, Length=282, Percent_Identity=32.2695035460993, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI298566325, Length=282, Percent_Identity=32.2695035460993, Blast_Score=108, Evalue=7e-24, Organism=Escherichia coli, GI1786891, Length=282, Percent_Identity=28.7234042553192, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1787878, Length=275, Percent_Identity=26.1818181818182, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787363, Length=309, Percent_Identity=30.7443365695793, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1790522, Length=271, Percent_Identity=31.7343173431734, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI87081733, Length=306, Percent_Identity=30.3921568627451, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI87082230, Length=248, Percent_Identity=31.8548387096774, Blast_Score=78, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR004654 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 30652; Mature: 30652
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESVCIGVDVGGTNLRFALVDQGGAVLSRVSEPTETVTAPAPFVARLQGRVQQLQREALA CCCEEEEEEECCCCEEEEEEECCCHHHHHCCCCCHHEECCCHHHHHHHHHHHHHHHHHHH RGVRVAGVGIGVAGLVSGEGAVLSSVNLPALQGVNLGAELSRALGVPVLVLNDANACAVG CCEEEEEECCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCEEEC EQRFGAGKGYRSWLMLTIGTGVGAGLILDGRLWTGANGLAGELGHLTVEPEGRPCGCGNR HHHCCCCCCCCEEEEEEECCCCCCCEEECCEEEECCCCCCCCCCEEEECCCCCCCCCCCC GCLEQYTFATAISAGNDSAAAVARRAVSGDAAAVARFEGAGRYLGIAVAGVLNLLNLEAV CHHHHHHHHHEEECCCCHHHHHHHHHHCCCHHHHEEECCCCCCHHHHHHHHHHHHHHEEE VLGGGVSESFELLAPAMRREICSRTLALPGAAACVVKGALGPDAGVLGAAQAAFDAEKIS EEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHC SRSHLS CCCCCC >Mature Secondary Structure MESVCIGVDVGGTNLRFALVDQGGAVLSRVSEPTETVTAPAPFVARLQGRVQQLQREALA CCCEEEEEEECCCCEEEEEEECCCHHHHHCCCCCHHEECCCHHHHHHHHHHHHHHHHHHH RGVRVAGVGIGVAGLVSGEGAVLSSVNLPALQGVNLGAELSRALGVPVLVLNDANACAVG CCEEEEEECCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCEEEC EQRFGAGKGYRSWLMLTIGTGVGAGLILDGRLWTGANGLAGELGHLTVEPEGRPCGCGNR HHHCCCCCCCCEEEEEEECCCCCCCEEECCEEEECCCCCCCCCCEEEECCCCCCCCCCCC GCLEQYTFATAISAGNDSAAAVARRAVSGDAAAVARFEGAGRYLGIAVAGVLNLLNLEAV CHHHHHHHHHEEECCCCHHHHHHHHHHCCCHHHHEEECCCCCCHHHHHHHHHHHHHHEEE VLGGGVSESFELLAPAMRREICSRTLALPGAAACVVKGALGPDAGVLGAAQAAFDAEKIS EEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHC SRSHLS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]