| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is maeB-1 [H]
Identifier: 197117712
GI number: 197117712
Start: 1526938
End: 1529187
Strand: Reverse
Name: maeB-1 [H]
Synonym: Gbem_1324
Alternate gene names: 197117712
Gene position: 1529187-1526938 (Counterclockwise)
Preceding gene: 197117716
Following gene: 197117711
Centisome position: 33.13
GC content: 62.04
Gene sequence:
>2250_bases ATGACAAAGAAAATGGACGCTCTCGAATACCATGCAACCGGGCGCAAGGGGAAGATCGAGGTCATCTCCTCCAAGCCGTG TCTTACCTCCCGCGACCTCTCGCTTGCTTACACCCCGGGTGTCGCCGAACCGTGCCTTGCCATCGAGCAGGATCCCGAGC TCGCCTACCAGTACACGGCGAAGGGGAACCTGGTCGCAGTAGTCTCCAACGGCACGGCGGTCCTGGGGCTGGGGAACATC GGGGCCATCGCCGGCAAGCCGGTCATGGAGGGGAAAGGGGTCCTCTTCAAGCGCTTCGCCGACCTGGACGTCTTCGATCT GGAGGTGAAGTCGGAGAACCCGGACGACGTGATCAAGGTGGTGCAGCTGCTGGAGCCCACCTTCGGCGGCATCAACCTCG AGGACATCAAGGCGCCGGAGTGTTTCTACATCGAGGAGGAACTGAAGAAGACCATGAACATCCCGGTCTTCCACGACGAC CAGCACGGAACGGCCATCATCTGTTCGGCGGCGCTCATCAACGCGTTGTCACTGGTCGGCAAGAAGATCGAGCAGGCAAG AATCGTGATCAACGGCGCCGGCGCCGCCGGGGTCGCCTGCGCGAACCTCATCCTCTCCCTGGGAGCAAGAGCGAAAAACC TTTTCATGTGCGACACCAAGGGGGTGATCTACAAGGGGAGAGCCGAGGGGATGAACCCTTACAAGGAGCGCCTGGCAAAC GACACGCCGCTGCGCACGCTCGAAGAGGCGATGCGCGGGGCCGACGTCTTCATCGGGGTCTCCGCCAAAGGCGCCGTCAC CCAGCAGATGGTGCGCGAGATGGCCAAGGACCCGGTGATCATGGCCATGGCCAATCCCCACCCGGAGATCACTCCGGAGG AGGTGCTCTCGGTCCGCTCCGACGTCATCATGGCGACAGGCAGGTCGGACTACCCGAACCAGGTGAACAACGTGCTCGGC TTCCCCTTCATCTTCCGGGGCGCGCTCGACGTCAGGGCCAGCACCATCAACGAGGAGATGAAGAAAGCCGCGGTTTTAGC CCTGGCGGAACTGGCGCGGGAGGATTGCCCCGACTCGGTCTGCCGCGCCTACGGCAACGAGAGCTTCACCTTCGGGAGAA ACTACATCATCCCCAAACCGTTCGACCCGCGCGCGCTTTTGCGGGTGGCCCCGGCGGTGGCCCAGGCGGCCATGGATTCG GGGGTCGCCCGCATGCCGATCGAGGAGATGGCCAAGTACACCGAGTGGCTCGAAGCGCTGCAGGGGCGCGCCAAGGAGAC CATGCGCCAGATCATCAACAAGGCGAAGTGCGACCCCAAGAAGATCGTCTTCCCGGAAGGGGACAACGAGAAGATCCTGA GGGCGGCCTACGCGCTGATAGAGGAGGGGATCGCCCATCCCATCCTGATCGGGAACAAGGCCAAGGTGCAGGAGAAGATA GCCGAGCTGGGGATGGAGCTTAACGCCACCGTAGTCGATCCCGAGACCTCGGAACTGACTGAAGGGTACGCCGCGGAGCT TTACAGGAAACGCCAGCGCAAGGGGGTGACCCTCTCGGAGGCGCGCCGCATCATGCGCCGCAAGTCCAGGAACCATTTCG GATCCATGATGGTGCACATGGGGGACGCGGATACCCTCCTCTCCGGCATCGACTCGCACTACCCCGACACCATCAGGCCG GCGCTGGAGATCATCGGCAGGCAACCGCAGCTCTCCGGCGTGCACGGCATGTACATGATGGTCTTTAAAAAGGGGATCTA TTTCCTCGCCGACACCACGGTGGAGATCGACCCGACAGCCGAGGAGCTGGCCGAAACCGCCCTCCTTGCGGCGGAAAAGG TGAAGCTTCTCGACATCGTTCCCCGTATCGCCATGCTCTCCTTTGCCAACTTCGGGTCGGTGAACCACGACCTCACGGTA AAGGTGAAAAGGGCGGTGGAGATCGTCAAGCAGAAGGCGCCGGAGCTTGAGATCGACGGGGAGATGCAGGCGGACACGGC GGTGACCCCGGAGCTTCTGGAAAACTACACCTTCTCCACCCTCACCGGTCCCGCGAACATACTGATCTTCCCGGACCTCA ACTCCGGTAACATCAGCTATAAGCTTTTGCACCGGCTGGGCGGGGCCGAAGCGATCGGGCCGCTTTTGATGGGAATGAAA AAGCCGGTCCATGTGCTGCAAAGAGGGGACGATGTCTCCACCATCGTGAACATGGCGGCGATAGCCGTGGTCGACGCCCA GAACCTGTAG
Upstream 100 bases:
>100_bases ACCTCGTCTTAACAACCCGGACCGGAACAATGACAGATAGTACTTGTTTGGTCAATGAGCTGATAGCTCCAGGAGGGTAA TTTATCTTGAGGAGGTAGCA
Downstream 100 bases:
>100_bases CGGGACGGGGTACCCTGCGCCGCCCATCCCTCGCTGGACATCCCATCACCATAAAGGAAAGGGGCACCGTGAATACGGAG CCCCTTTCTTAGTCGCGCAA
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 749; Mature: 748
Protein sequence:
>749_residues MTKKMDALEYHATGRKGKIEVISSKPCLTSRDLSLAYTPGVAEPCLAIEQDPELAYQYTAKGNLVAVVSNGTAVLGLGNI GAIAGKPVMEGKGVLFKRFADLDVFDLEVKSENPDDVIKVVQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDD QHGTAIICSAALINALSLVGKKIEQARIVINGAGAAGVACANLILSLGARAKNLFMCDTKGVIYKGRAEGMNPYKERLAN DTPLRTLEEAMRGADVFIGVSAKGAVTQQMVREMAKDPVIMAMANPHPEITPEEVLSVRSDVIMATGRSDYPNQVNNVLG FPFIFRGALDVRASTINEEMKKAAVLALAELAREDCPDSVCRAYGNESFTFGRNYIIPKPFDPRALLRVAPAVAQAAMDS GVARMPIEEMAKYTEWLEALQGRAKETMRQIINKAKCDPKKIVFPEGDNEKILRAAYALIEEGIAHPILIGNKAKVQEKI AELGMELNATVVDPETSELTEGYAAELYRKRQRKGVTLSEARRIMRRKSRNHFGSMMVHMGDADTLLSGIDSHYPDTIRP ALEIIGRQPQLSGVHGMYMMVFKKGIYFLADTTVEIDPTAEELAETALLAAEKVKLLDIVPRIAMLSFANFGSVNHDLTV KVKRAVEIVKQKAPELEIDGEMQADTAVTPELLENYTFSTLTGPANILIFPDLNSGNISYKLLHRLGGAEAIGPLLMGMK KPVHVLQRGDDVSTIVNMAAIAVVDAQNL
Sequences:
>Translated_749_residues MTKKMDALEYHATGRKGKIEVISSKPCLTSRDLSLAYTPGVAEPCLAIEQDPELAYQYTAKGNLVAVVSNGTAVLGLGNI GAIAGKPVMEGKGVLFKRFADLDVFDLEVKSENPDDVIKVVQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDD QHGTAIICSAALINALSLVGKKIEQARIVINGAGAAGVACANLILSLGARAKNLFMCDTKGVIYKGRAEGMNPYKERLAN DTPLRTLEEAMRGADVFIGVSAKGAVTQQMVREMAKDPVIMAMANPHPEITPEEVLSVRSDVIMATGRSDYPNQVNNVLG FPFIFRGALDVRASTINEEMKKAAVLALAELAREDCPDSVCRAYGNESFTFGRNYIIPKPFDPRALLRVAPAVAQAAMDS GVARMPIEEMAKYTEWLEALQGRAKETMRQIINKAKCDPKKIVFPEGDNEKILRAAYALIEEGIAHPILIGNKAKVQEKI AELGMELNATVVDPETSELTEGYAAELYRKRQRKGVTLSEARRIMRRKSRNHFGSMMVHMGDADTLLSGIDSHYPDTIRP ALEIIGRQPQLSGVHGMYMMVFKKGIYFLADTTVEIDPTAEELAETALLAAEKVKLLDIVPRIAMLSFANFGSVNHDLTV KVKRAVEIVKQKAPELEIDGEMQADTAVTPELLENYTFSTLTGPANILIFPDLNSGNISYKLLHRLGGAEAIGPLLMGMK KPVHVLQRGDDVSTIVNMAAIAVVDAQNL >Mature_748_residues TKKMDALEYHATGRKGKIEVISSKPCLTSRDLSLAYTPGVAEPCLAIEQDPELAYQYTAKGNLVAVVSNGTAVLGLGNIG AIAGKPVMEGKGVLFKRFADLDVFDLEVKSENPDDVIKVVQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDDQ HGTAIICSAALINALSLVGKKIEQARIVINGAGAAGVACANLILSLGARAKNLFMCDTKGVIYKGRAEGMNPYKERLAND TPLRTLEEAMRGADVFIGVSAKGAVTQQMVREMAKDPVIMAMANPHPEITPEEVLSVRSDVIMATGRSDYPNQVNNVLGF PFIFRGALDVRASTINEEMKKAAVLALAELAREDCPDSVCRAYGNESFTFGRNYIIPKPFDPRALLRVAPAVAQAAMDSG VARMPIEEMAKYTEWLEALQGRAKETMRQIINKAKCDPKKIVFPEGDNEKILRAAYALIEEGIAHPILIGNKAKVQEKIA ELGMELNATVVDPETSELTEGYAAELYRKRQRKGVTLSEARRIMRRKSRNHFGSMMVHMGDADTLLSGIDSHYPDTIRPA LEIIGRQPQLSGVHGMYMMVFKKGIYFLADTTVEIDPTAEELAETALLAAEKVKLLDIVPRIAMLSFANFGSVNHDLTVK VKRAVEIVKQKAPELEIDGEMQADTAVTPELLENYTFSTLTGPANILIFPDLNSGNISYKLLHRLGGAEAIGPLLMGMKK PVHVLQRGDDVSTIVNMAAIAVVDAQNL
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI62420882, Length=399, Percent_Identity=26.8170426065163, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI62420880, Length=399, Percent_Identity=26.8170426065163, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI239049447, Length=399, Percent_Identity=26.8170426065163, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI4505143, Length=344, Percent_Identity=27.6162790697674, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI4505145, Length=318, Percent_Identity=27.6729559748428, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI270265879, Length=318, Percent_Identity=27.6729559748428, Blast_Score=70, Evalue=9e-12, Organism=Escherichia coli, GI1788806, Length=754, Percent_Identity=50.3978779840849, Blast_Score=727, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=356, Percent_Identity=34.8314606741573, Blast_Score=197, Evalue=2e-51, Organism=Escherichia coli, GI1788800, Length=316, Percent_Identity=34.8101265822785, Blast_Score=186, Evalue=4e-48, Organism=Escherichia coli, GI87081919, Length=233, Percent_Identity=28.755364806867, Blast_Score=82, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17537199, Length=415, Percent_Identity=22.6506024096386, Blast_Score=69, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322823, Length=269, Percent_Identity=28.6245353159851, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24646388, Length=406, Percent_Identity=27.8325123152709, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI24646386, Length=406, Percent_Identity=27.8325123152709, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI78707242, Length=399, Percent_Identity=25.31328320802, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI78707238, Length=399, Percent_Identity=25.31328320802, Blast_Score=77, Evalue=4e-14, Organism=Drosophila melanogaster, GI21356279, Length=463, Percent_Identity=25.0539956803456, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI281362672, Length=463, Percent_Identity=25.0539956803456, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI281362674, Length=463, Percent_Identity=25.0539956803456, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI78707240, Length=409, Percent_Identity=24.6943765281174, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI281363503, Length=352, Percent_Identity=23.8636363636364, Blast_Score=68, Evalue=3e-11, Organism=Drosophila melanogaster, GI281363505, Length=352, Percent_Identity=23.8636363636364, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI78707236, Length=352, Percent_Identity=23.8636363636364, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI78707232, Length=352, Percent_Identity=23.8636363636364, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 81697; Mature: 81566
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKMDALEYHATGRKGKIEVISSKPCLTSRDLSLAYTPGVAEPCLAIEQDPELAYQYTA CCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEC KGNLVAVVSNGTAVLGLGNIGAIAGKPVMEGKGVLFKRFADLDVFDLEVKSENPDDVIKV CCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHH VQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDDQHGTAIICSAALINALSLVG HHHHCCCCCCCCHHHCCCCCEEEEHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHHH KKIEQARIVINGAGAAGVACANLILSLGARAKNLFMCDTKGVIYKGRAEGMNPYKERLAN HHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCHHHHHHCC DTPLRTLEEAMRGADVFIGVSAKGAVTQQMVREMAKDPVIMAMANPHPEITPEEVLSVRS CCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHH DVIMATGRSDYPNQVNNVLGFPFIFRGALDVRASTINEEMKKAAVLALAELAREDCPDSV CEEEECCCCCCCHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH CRAYGNESFTFGRNYIIPKPFDPRALLRVAPAVAQAAMDSGVARMPIEEMAKYTEWLEAL HHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QGRAKETMRQIINKAKCDPKKIVFPEGDNEKILRAAYALIEEGIAHPILIGNKAKVQEKI HHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHH AELGMELNATVVDPETSELTEGYAAELYRKRQRKGVTLSEARRIMRRKSRNHFGSMMVHM HHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE GDADTLLSGIDSHYPDTIRPALEIIGRQPQLSGVHGMYMMVFKKGIYFLADTTVEIDPTA CCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEECEEEECCCH EELAETALLAAEKVKLLDIVPRIAMLSFANFGSVNHDLTVKVKRAVEIVKQKAPELEIDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCEECC EMQADTAVTPELLENYTFSTLTGPANILIFPDLNSGNISYKLLHRLGGAEAIGPLLMGMK CCCCCCCCCHHHHHCCCCEEECCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHCC KPVHVLQRGDDVSTIVNMAAIAVVDAQNL CHHHHHHCCCHHHHHHHHHHHHEEECCCC >Mature Secondary Structure TKKMDALEYHATGRKGKIEVISSKPCLTSRDLSLAYTPGVAEPCLAIEQDPELAYQYTA CCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEC KGNLVAVVSNGTAVLGLGNIGAIAGKPVMEGKGVLFKRFADLDVFDLEVKSENPDDVIKV CCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHH VQLLEPTFGGINLEDIKAPECFYIEEELKKTMNIPVFHDDQHGTAIICSAALINALSLVG HHHHCCCCCCCCHHHCCCCCEEEEHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHHH KKIEQARIVINGAGAAGVACANLILSLGARAKNLFMCDTKGVIYKGRAEGMNPYKERLAN HHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCHHHHHHCC DTPLRTLEEAMRGADVFIGVSAKGAVTQQMVREMAKDPVIMAMANPHPEITPEEVLSVRS CCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHH DVIMATGRSDYPNQVNNVLGFPFIFRGALDVRASTINEEMKKAAVLALAELAREDCPDSV CEEEECCCCCCCHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH CRAYGNESFTFGRNYIIPKPFDPRALLRVAPAVAQAAMDSGVARMPIEEMAKYTEWLEAL HHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QGRAKETMRQIINKAKCDPKKIVFPEGDNEKILRAAYALIEEGIAHPILIGNKAKVQEKI HHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHH AELGMELNATVVDPETSELTEGYAAELYRKRQRKGVTLSEARRIMRRKSRNHFGSMMVHM HHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE GDADTLLSGIDSHYPDTIRPALEIIGRQPQLSGVHGMYMMVFKKGIYFLADTTVEIDPTA CCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEECEEEECCCH EELAETALLAAEKVKLLDIVPRIAMLSFANFGSVNHDLTVKVKRAVEIVKQKAPELEIDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCEECC EMQADTAVTPELLENYTFSTLTGPANILIFPDLNSGNISYKLLHRLGGAEAIGPLLMGMK CCCCCCCCCHHHHHCCCCEEECCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHCC KPVHVLQRGDDVSTIVNMAAIAVVDAQNL CHHHHHHCCCHHHHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]