Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117711

Identifier: 197117711

GI number: 197117711

Start: 1526010

End: 1526747

Strand: Reverse

Name: 197117711

Synonym: Gbem_1323

Alternate gene names: NA

Gene position: 1526747-1526010 (Counterclockwise)

Preceding gene: 197117712

Following gene: 197117686

Centisome position: 33.08

GC content: 63.55

Gene sequence:

>738_bases
ATGGATGAAGTCTTAGCGCCGCTTGACGAAGCGGCCCAGCCGATAAAGCCCAACAAGCAGTTCATCACCGGACTAGTGGT
GTCTCTGGCACTGCACCTTTTCTGCGCCGTCATCCTCATCGGCCTTCCCGGCGGGGGCGAACCGCCGCGGCCGCCGGTCA
CCTACGTCGACCTCAACTCCATTCCCACTCCTCGCCCCGCGGCTCCGGCTATACAGCCTGCCGCTTCCGAACCGGAACTT
CCCGAGCCCGATCCCGCCAAGGCCGAGCCGATACCGGTCCCCGAGACCCCGCCCGCACCGCCGCAGCAGGTCGAAGTGCA
GCAGCCTACGGCCCAGCCCGCACCGCCGCAACCGGCGCCCGCCGAAGAGAGGTCCGCGACCACCTTCGGGATGGGGCTCA
CCAAGGGGTACTTCAAGAGCCTGAGCGACGGCGACACCCTCCGCCCCGATGTGAAGGCTTACTACCTGGAAATCTTGCAG
GGAGTGAACAACAAGTGGTGGCTGGAGCAGAAGGACCAGAAGGTGAGAACCATTGTAGTTAACATAAGCGTGGCGAGAAA
CGGCGAAATCGTGGGGAGCTTCATCCTGCAGAGTTCGGGGAACATCGTCTACGACCGGATGGTGCAAAAGACCCTGGAGA
GTTCGGGTCCCTTGCCGCCGCTTCCTGCCAGCTTCCAGGGCGACGTCTTCAACGCCCCCATCCGTTTGGTCCCCCCGCTG
AACCTGATGGCCTGGTAG

Upstream 100 bases:

>100_bases
AGTCGCGCAAGGCTTCTTTTCATTGCCTTGTCCCCGGCTTATTTGCTATACATGGACGCTGTGTCAGCAGGTAATCAGGT
GAGAAGGACGGGCAGTACCC

Downstream 100 bases:

>100_bases
CGGCCGCTACCCTTCTTCCAGTTCCAGTTCGATGATGTCCAGCCGCTCCTCCCCGGAAAGAGCGGAGAGCCTCCGAGAGG
CGTCATGGCACCCGGGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NB-Dependent Receptor

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MDEVLAPLDEAAQPIKPNKQFITGLVVSLALHLFCAVILIGLPGGGEPPRPPVTYVDLNSIPTPRPAAPAIQPAASEPEL
PEPDPAKAEPIPVPETPPAPPQQVEVQQPTAQPAPPQPAPAEERSATTFGMGLTKGYFKSLSDGDTLRPDVKAYYLEILQ
GVNNKWWLEQKDQKVRTIVVNISVARNGEIVGSFILQSSGNIVYDRMVQKTLESSGPLPPLPASFQGDVFNAPIRLVPPL
NLMAW

Sequences:

>Translated_245_residues
MDEVLAPLDEAAQPIKPNKQFITGLVVSLALHLFCAVILIGLPGGGEPPRPPVTYVDLNSIPTPRPAAPAIQPAASEPEL
PEPDPAKAEPIPVPETPPAPPQQVEVQQPTAQPAPPQPAPAEERSATTFGMGLTKGYFKSLSDGDTLRPDVKAYYLEILQ
GVNNKWWLEQKDQKVRTIVVNISVARNGEIVGSFILQSSGNIVYDRMVQKTLESSGPLPPLPASFQGDVFNAPIRLVPPL
NLMAW
>Mature_245_residues
MDEVLAPLDEAAQPIKPNKQFITGLVVSLALHLFCAVILIGLPGGGEPPRPPVTYVDLNSIPTPRPAAPAIQPAASEPEL
PEPDPAKAEPIPVPETPPAPPQQVEVQQPTAQPAPPQPAPAEERSATTFGMGLTKGYFKSLSDGDTLRPDVKAYYLEILQ
GVNNKWWLEQKDQKVRTIVVNISVARNGEIVGSFILQSSGNIVYDRMVQKTLESSGPLPPLPASFQGDVFNAPIRLVPPL
NLMAW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26351; Mature: 26351

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEVLAPLDEAAQPIKPNKQFITGLVVSLALHLFCAVILIGLPGGGEPPRPPVTYVDLNS
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
IPTPRPAAPAIQPAASEPELPEPDPAKAEPIPVPETPPAPPQQVEVQQPTAQPAPPQPAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
AEERSATTFGMGLTKGYFKSLSDGDTLRPDVKAYYLEILQGVNNKWWLEQKDQKVRTIVV
CCCCCCCHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE
NISVARNGEIVGSFILQSSGNIVYDRMVQKTLESSGPLPPLPASFQGDVFNAPIRLVPPL
EEEEECCCCEEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEECCC
NLMAW
HHHCC
>Mature Secondary Structure
MDEVLAPLDEAAQPIKPNKQFITGLVVSLALHLFCAVILIGLPGGGEPPRPPVTYVDLNS
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
IPTPRPAAPAIQPAASEPELPEPDPAKAEPIPVPETPPAPPQQVEVQQPTAQPAPPQPAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
AEERSATTFGMGLTKGYFKSLSDGDTLRPDVKAYYLEILQGVNNKWWLEQKDQKVRTIVV
CCCCCCCHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE
NISVARNGEIVGSFILQSSGNIVYDRMVQKTLESSGPLPPLPASFQGDVFNAPIRLVPPL
EEEEECCCCEEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEECCC
NLMAW
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA