| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117711
Identifier: 197117711
GI number: 197117711
Start: 1526010
End: 1526747
Strand: Reverse
Name: 197117711
Synonym: Gbem_1323
Alternate gene names: NA
Gene position: 1526747-1526010 (Counterclockwise)
Preceding gene: 197117712
Following gene: 197117686
Centisome position: 33.08
GC content: 63.55
Gene sequence:
>738_bases ATGGATGAAGTCTTAGCGCCGCTTGACGAAGCGGCCCAGCCGATAAAGCCCAACAAGCAGTTCATCACCGGACTAGTGGT GTCTCTGGCACTGCACCTTTTCTGCGCCGTCATCCTCATCGGCCTTCCCGGCGGGGGCGAACCGCCGCGGCCGCCGGTCA CCTACGTCGACCTCAACTCCATTCCCACTCCTCGCCCCGCGGCTCCGGCTATACAGCCTGCCGCTTCCGAACCGGAACTT CCCGAGCCCGATCCCGCCAAGGCCGAGCCGATACCGGTCCCCGAGACCCCGCCCGCACCGCCGCAGCAGGTCGAAGTGCA GCAGCCTACGGCCCAGCCCGCACCGCCGCAACCGGCGCCCGCCGAAGAGAGGTCCGCGACCACCTTCGGGATGGGGCTCA CCAAGGGGTACTTCAAGAGCCTGAGCGACGGCGACACCCTCCGCCCCGATGTGAAGGCTTACTACCTGGAAATCTTGCAG GGAGTGAACAACAAGTGGTGGCTGGAGCAGAAGGACCAGAAGGTGAGAACCATTGTAGTTAACATAAGCGTGGCGAGAAA CGGCGAAATCGTGGGGAGCTTCATCCTGCAGAGTTCGGGGAACATCGTCTACGACCGGATGGTGCAAAAGACCCTGGAGA GTTCGGGTCCCTTGCCGCCGCTTCCTGCCAGCTTCCAGGGCGACGTCTTCAACGCCCCCATCCGTTTGGTCCCCCCGCTG AACCTGATGGCCTGGTAG
Upstream 100 bases:
>100_bases AGTCGCGCAAGGCTTCTTTTCATTGCCTTGTCCCCGGCTTATTTGCTATACATGGACGCTGTGTCAGCAGGTAATCAGGT GAGAAGGACGGGCAGTACCC
Downstream 100 bases:
>100_bases CGGCCGCTACCCTTCTTCCAGTTCCAGTTCGATGATGTCCAGCCGCTCCTCCCCGGAAAGAGCGGAGAGCCTCCGAGAGG CGTCATGGCACCCGGGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NB-Dependent Receptor
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MDEVLAPLDEAAQPIKPNKQFITGLVVSLALHLFCAVILIGLPGGGEPPRPPVTYVDLNSIPTPRPAAPAIQPAASEPEL PEPDPAKAEPIPVPETPPAPPQQVEVQQPTAQPAPPQPAPAEERSATTFGMGLTKGYFKSLSDGDTLRPDVKAYYLEILQ GVNNKWWLEQKDQKVRTIVVNISVARNGEIVGSFILQSSGNIVYDRMVQKTLESSGPLPPLPASFQGDVFNAPIRLVPPL NLMAW
Sequences:
>Translated_245_residues MDEVLAPLDEAAQPIKPNKQFITGLVVSLALHLFCAVILIGLPGGGEPPRPPVTYVDLNSIPTPRPAAPAIQPAASEPEL PEPDPAKAEPIPVPETPPAPPQQVEVQQPTAQPAPPQPAPAEERSATTFGMGLTKGYFKSLSDGDTLRPDVKAYYLEILQ GVNNKWWLEQKDQKVRTIVVNISVARNGEIVGSFILQSSGNIVYDRMVQKTLESSGPLPPLPASFQGDVFNAPIRLVPPL NLMAW >Mature_245_residues MDEVLAPLDEAAQPIKPNKQFITGLVVSLALHLFCAVILIGLPGGGEPPRPPVTYVDLNSIPTPRPAAPAIQPAASEPEL PEPDPAKAEPIPVPETPPAPPQQVEVQQPTAQPAPPQPAPAEERSATTFGMGLTKGYFKSLSDGDTLRPDVKAYYLEILQ GVNNKWWLEQKDQKVRTIVVNISVARNGEIVGSFILQSSGNIVYDRMVQKTLESSGPLPPLPASFQGDVFNAPIRLVPPL NLMAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26351; Mature: 26351
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEVLAPLDEAAQPIKPNKQFITGLVVSLALHLFCAVILIGLPGGGEPPRPPVTYVDLNS CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC IPTPRPAAPAIQPAASEPELPEPDPAKAEPIPVPETPPAPPQQVEVQQPTAQPAPPQPAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC AEERSATTFGMGLTKGYFKSLSDGDTLRPDVKAYYLEILQGVNNKWWLEQKDQKVRTIVV CCCCCCCHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE NISVARNGEIVGSFILQSSGNIVYDRMVQKTLESSGPLPPLPASFQGDVFNAPIRLVPPL EEEEECCCCEEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEECCC NLMAW HHHCC >Mature Secondary Structure MDEVLAPLDEAAQPIKPNKQFITGLVVSLALHLFCAVILIGLPGGGEPPRPPVTYVDLNS CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC IPTPRPAAPAIQPAASEPELPEPDPAKAEPIPVPETPPAPPQQVEVQQPTAQPAPPQPAP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC AEERSATTFGMGLTKGYFKSLSDGDTLRPDVKAYYLEILQGVNNKWWLEQKDQKVRTIVV CCCCCCCHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE NISVARNGEIVGSFILQSSGNIVYDRMVQKTLESSGPLPPLPASFQGDVFNAPIRLVPPL EEEEECCCCEEEHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEECCC NLMAW HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA