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The map label for this gene is fixN [H]

Identifier: 197117625

GI number: 197117625

Start: 1432591

End: 1433994

Strand: Reverse

Name: fixN [H]

Synonym: Gbem_1237

Alternate gene names: 197117625

Gene position: 1433994-1432591 (Counterclockwise)

Preceding gene: 197117626

Following gene: 197117624

Centisome position: 31.07

GC content: 62.89

Gene sequence:

>1404_bases
ATGAATCAACAGGAAGGGTACGCGGACGACGTCGTCAAGGGGTTCATCACCTGGAGCATGGTGTGGGGTCTCGTGGCGGT
CCTGGTCGGCGTGCTGATCTCGTTCCAGATCGCTTTCCCGCAGTTGAACCTCCCCCCCTACCTCACCTACGGACGGCTGC
GCCCGATCCACACCAACGCCGGGATCTTCGGCTGGGGGATCGGCAGCTTCATGGCCTTTTTCTACTACATCACCCAGCGC
CTCACCCGTACCGGCATCTGGAGCCCGGGCCTCGCCCGTGTCCAGCTCTGGCTCTTCAACCTGGCCATAGCGCTCGCCGC
GGTGACGCTGGCTCTCGGCATGAACCGCTCCAAGGAGTACGCCGAGCTGGAATGGCCGGTGGCGAGCCTGGTGGTGGTGG
TATGGGTCATCTTCGCGATCAACATCGTCATGACCATCGTCAAGCGCCGCGAGGAGCAGATGTACATCTCGCTTTGGTAC
ATCCTGGCCACCCTGGTCGGCGTCGCGGTGCTCTACCTGGTGAACAACGCCTCCATTCCCGTGTCGCTCACCAAGTCCTA
CTCCGCCTACGCGGGGGCCAACGACGCCAACGTGCAGTGGTGGTACGGCCACAACGCCGTCGCCATGGTGCTCACCACCC
CACCGCTCGCCATCTTCTACTACTTCCTCCCGAAAGCGACCGGCGTCCCCATCTACAGCCACCGCATGGGCGTGATCGCC
TTCTGGAGCCTCATCTTCATGTACCTTTGGACCGGAGCGCACCACCTGCTCTGGGCGCCGGTCCCCGACTGGGTGCAGAC
GCTCGCCATGGCCTTCTCGGTGATGCTGATCGCCCCCTCCTGGGCCGCGGTCTTCAACGGCTACTTCTCGATGAACGGCC
AGTGGCACCAGATGCGTGAGAACTACCTGGTCAAGTTCCTCATCTTCGGCATCACCTTCTACGGGGCGCAGACGCTGCAG
GGTCCCTCCCAGTCGATCAGGACCTTCTCCGCCTTCATCCATTTCACCGACTGGGTCCCGGGGCACGTGCACATGGGGAC
GCTGGGGTGGGTCTCGCTGGTCCTCTTCGCCGCGATCTACTACACCCTCCCCCGCATCTACGGCACAGAGATCTACAGCA
TCCGCCTGGCCAACGTCCATTTCTGGCTGGTGCTCACCGGGCAGCTCATGTTCTCGATCAGCATGTGGATCGCGGGGGTA
CAGCAGGCGGCGATGCTGAACGCGACCAACCCGGACGGAAGCCTCCACTACAGCTTCATGGAGACCATGATCGAGATCTA
TCCCTACTGGCACATAAGAGCCCTGGGCGGGGTGGTGTATCTCGCCGGACTTTGCGTGTTCCTCTACAACATCTGGAAGA
CCGTCGCCGGCGCCAAGACGCAGGGCGCCGCGCAGCCGGCCTAG

Upstream 100 bases:

>100_bases
GCAGGAAGGTTTAACGGTTTATGACTGGCGATCGCGAAGCTGGAGCGAACGTCGTAACGGCTGAAAGATTGATTTCCCAC
TCCATATCGAGGAGGCTGGC

Downstream 100 bases:

>100_bases
GGAGGAGACGCCATGATAGAGAAAAAACCGATCGTTTTCCTGCTCCTGGCCACCGTCACCATCCTGGTCGGCACCGTCAT
CACCATGGTGATCCCCTTCC

Product: cytochrome c oxidase cbb3-type subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MNQQEGYADDVVKGFITWSMVWGLVAVLVGVLISFQIAFPQLNLPPYLTYGRLRPIHTNAGIFGWGIGSFMAFFYYITQR
LTRTGIWSPGLARVQLWLFNLAIALAAVTLALGMNRSKEYAELEWPVASLVVVVWVIFAINIVMTIVKRREEQMYISLWY
ILATLVGVAVLYLVNNASIPVSLTKSYSAYAGANDANVQWWYGHNAVAMVLTTPPLAIFYYFLPKATGVPIYSHRMGVIA
FWSLIFMYLWTGAHHLLWAPVPDWVQTLAMAFSVMLIAPSWAAVFNGYFSMNGQWHQMRENYLVKFLIFGITFYGAQTLQ
GPSQSIRTFSAFIHFTDWVPGHVHMGTLGWVSLVLFAAIYYTLPRIYGTEIYSIRLANVHFWLVLTGQLMFSISMWIAGV
QQAAMLNATNPDGSLHYSFMETMIEIYPYWHIRALGGVVYLAGLCVFLYNIWKTVAGAKTQGAAQPA

Sequences:

>Translated_467_residues
MNQQEGYADDVVKGFITWSMVWGLVAVLVGVLISFQIAFPQLNLPPYLTYGRLRPIHTNAGIFGWGIGSFMAFFYYITQR
LTRTGIWSPGLARVQLWLFNLAIALAAVTLALGMNRSKEYAELEWPVASLVVVVWVIFAINIVMTIVKRREEQMYISLWY
ILATLVGVAVLYLVNNASIPVSLTKSYSAYAGANDANVQWWYGHNAVAMVLTTPPLAIFYYFLPKATGVPIYSHRMGVIA
FWSLIFMYLWTGAHHLLWAPVPDWVQTLAMAFSVMLIAPSWAAVFNGYFSMNGQWHQMRENYLVKFLIFGITFYGAQTLQ
GPSQSIRTFSAFIHFTDWVPGHVHMGTLGWVSLVLFAAIYYTLPRIYGTEIYSIRLANVHFWLVLTGQLMFSISMWIAGV
QQAAMLNATNPDGSLHYSFMETMIEIYPYWHIRALGGVVYLAGLCVFLYNIWKTVAGAKTQGAAQPA
>Mature_467_residues
MNQQEGYADDVVKGFITWSMVWGLVAVLVGVLISFQIAFPQLNLPPYLTYGRLRPIHTNAGIFGWGIGSFMAFFYYITQR
LTRTGIWSPGLARVQLWLFNLAIALAAVTLALGMNRSKEYAELEWPVASLVVVVWVIFAINIVMTIVKRREEQMYISLWY
ILATLVGVAVLYLVNNASIPVSLTKSYSAYAGANDANVQWWYGHNAVAMVLTTPPLAIFYYFLPKATGVPIYSHRMGVIA
FWSLIFMYLWTGAHHLLWAPVPDWVQTLAMAFSVMLIAPSWAAVFNGYFSMNGQWHQMRENYLVKFLIFGITFYGAQTLQ
GPSQSIRTFSAFIHFTDWVPGHVHMGTLGWVSLVLFAAIYYTLPRIYGTEIYSIRLANVHFWLVLTGQLMFSISMWIAGV
QQAAMLNATNPDGSLHYSFMETMIEIYPYWHIRALGGVVYLAGLCVFLYNIWKTVAGAKTQGAAQPA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 52678; Mature: 52678

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQQEGYADDVVKGFITWSMVWGLVAVLVGVLISFQIAFPQLNLPPYLTYGRLRPIHTNA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEECCC
GIFGWGIGSFMAFFYYITQRLTRTGIWSPGLARVQLWLFNLAIALAAVTLALGMNRSKEY
CEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AELEWPVASLVVVVWVIFAINIVMTIVKRREEQMYISLWYILATLVGVAVLYLVNNASIP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VSLTKSYSAYAGANDANVQWWYGHNAVAMVLTTPPLAIFYYFLPKATGVPIYSHRMGVIA
EEECCCCHHHCCCCCCCEEEEECCCEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHH
FWSLIFMYLWTGAHHLLWAPVPDWVQTLAMAFSVMLIAPSWAAVFNGYFSMNGQWHQMRE
HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHCCCCHHHHHHH
NYLVKFLIFGITFYGAQTLQGPSQSIRTFSAFIHFTDWVPGHVHMGTLGWVSLVLFAAIY
HHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHH
YTLPRIYGTEIYSIRLANVHFWLVLTGQLMFSISMWIAGVQQAAMLNATNPDGSLHYSFM
HHHHHHHCCEEEEEEEECEEEEEEEHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHH
ETMIEIYPYWHIRALGGVVYLAGLCVFLYNIWKTVAGAKTQGAAQPA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNQQEGYADDVVKGFITWSMVWGLVAVLVGVLISFQIAFPQLNLPPYLTYGRLRPIHTNA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEEEECCC
GIFGWGIGSFMAFFYYITQRLTRTGIWSPGLARVQLWLFNLAIALAAVTLALGMNRSKEY
CEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AELEWPVASLVVVVWVIFAINIVMTIVKRREEQMYISLWYILATLVGVAVLYLVNNASIP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VSLTKSYSAYAGANDANVQWWYGHNAVAMVLTTPPLAIFYYFLPKATGVPIYSHRMGVIA
EEECCCCHHHCCCCCCCEEEEECCCEEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHH
FWSLIFMYLWTGAHHLLWAPVPDWVQTLAMAFSVMLIAPSWAAVFNGYFSMNGQWHQMRE
HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHCCCCHHHHHHH
NYLVKFLIFGITFYGAQTLQGPSQSIRTFSAFIHFTDWVPGHVHMGTLGWVSLVLFAAIY
HHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHH
YTLPRIYGTEIYSIRLANVHFWLVLTGQLMFSISMWIAGVQQAAMLNATNPDGSLHYSFM
HHHHHHHCCEEEEEEEECEEEEEEEHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHH
ETMIEIYPYWHIRALGGVVYLAGLCVFLYNIWKTVAGAKTQGAAQPA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]