| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197117620
Identifier: 197117620
GI number: 197117620
Start: 1429358
End: 1429819
Strand: Reverse
Name: 197117620
Synonym: Gbem_1232
Alternate gene names: NA
Gene position: 1429819-1429358 (Counterclockwise)
Preceding gene: 197117621
Following gene: 197117619
Centisome position: 30.98
GC content: 64.29
Gene sequence:
>462_bases ATGACCAAGCGCACCACCAAAACCACCTGCTGCTACCGGGTCGTCCTAGTGACGCTGTTCGGCATCTTCATCGCCGGCAT GGCCGCTACCTTTTTCGCCTCCGGGATGCTTGCGAGCCGCGTCACCGATCCCGACTATTACCGCAACGGGCTCAACTACG ACCGCACCCGAAGCGGCGCCAGGAACCCAGGGCTCAAATGGACCCTGACGGCGACGCTTGCCGGGCGCGACCTGCTGGTT CGCGTCTGCGACGAGAAGGGGGCGCCGGTTGCCGGAGGGAGCCTTTCCCTGCACCCCGGCAAAAAAACGGACAGCTCCGC GTTGCCGCTGCAGCTTGCCGAGAGCGCACCTGGGGTATTCCGGACTTCGTTGCCGGTATCCGCCCAGAGTGAGCTTCAGG GGGTGCTCCTCTTCACCAGGGGCGAGGCCAGCGCGAGCCAAAGGGTGGTGTTCTTCAATTGA
Upstream 100 bases:
>100_bases GCGAGGGCGCTGAACGCCGAACTGAGGCTCGTGTCGCAAGGAAGGGTGCTGGCGGCGACGCCGCTCCCGGTGGCAGTGGA GTAACGACAAGGGAGAAAGC
Downstream 100 bases:
>100_bases CGGCCGCCCAATTCCCATGCTTTCACTGCGGAGCCGAGATCCCCGCCGGGGCGCTGGTGGAGGAGCGCGCGGACGACGCT ACCTTGAGCTTTTGCTGCCA
Product: FixH superfamily protein
Products: NA
Alternate protein names: FixH Family Protein
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MTKRTTKTTCCYRVVLVTLFGIFIAGMAATFFASGMLASRVTDPDYYRNGLNYDRTRSGARNPGLKWTLTATLAGRDLLV RVCDEKGAPVAGGSLSLHPGKKTDSSALPLQLAESAPGVFRTSLPVSAQSELQGVLLFTRGEASASQRVVFFN
Sequences:
>Translated_153_residues MTKRTTKTTCCYRVVLVTLFGIFIAGMAATFFASGMLASRVTDPDYYRNGLNYDRTRSGARNPGLKWTLTATLAGRDLLV RVCDEKGAPVAGGSLSLHPGKKTDSSALPLQLAESAPGVFRTSLPVSAQSELQGVLLFTRGEASASQRVVFFN >Mature_152_residues TKRTTKTTCCYRVVLVTLFGIFIAGMAATFFASGMLASRVTDPDYYRNGLNYDRTRSGARNPGLKWTLTATLAGRDLLVR VCDEKGAPVAGGSLSLHPGKKTDSSALPLQLAESAPGVFRTSLPVSAQSELQGVLLFTRGEASASQRVVFFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16411; Mature: 16280
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRTTKTTCCYRVVLVTLFGIFIAGMAATFFASGMLASRVTDPDYYRNGLNYDRTRSGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC RNPGLKWTLTATLAGRDLLVRVCDEKGAPVAGGSLSLHPGKKTDSSALPLQLAESAPGVF CCCCCEEEEEEEECCCHHEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCEE RTSLPVSAQSELQGVLLFTRGEASASQRVVFFN EECCCCCCCCCCCEEEEEECCCCCCCCEEEEEC >Mature Secondary Structure TKRTTKTTCCYRVVLVTLFGIFIAGMAATFFASGMLASRVTDPDYYRNGLNYDRTRSGA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC RNPGLKWTLTATLAGRDLLVRVCDEKGAPVAGGSLSLHPGKKTDSSALPLQLAESAPGVF CCCCCEEEEEEEECCCHHEEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCCEE RTSLPVSAQSELQGVLLFTRGEASASQRVVFFN EECCCCCCCCCCCEEEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA