Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117591

Identifier: 197117591

GI number: 197117591

Start: 1397303

End: 1398463

Strand: Direct

Name: 197117591

Synonym: Gbem_1203

Alternate gene names: NA

Gene position: 1397303-1398463 (Clockwise)

Preceding gene: 197117590

Following gene: 197117592

Centisome position: 30.28

GC content: 63.65

Gene sequence:

>1161_bases
ATGAACCGATACCGCATACATTGTCTGCCGGGCCTCCTGCTAGTGGGGGCCCTTTACTTTGGCGCGCCCGTTTTGGCCGC
GACGCCCACACCTGCCGCTGCGCCGGGCGCGGCCGAGGCGGCGCAACCAAAGACAGAAGCGGCGCAACCAAGGACTGAAG
CGGAGTTCATCCCCTCTTTTCGCTACGGCGACCGCGTGCTCACCGAGGACACCGTCTGGAAAGGGGTGGTGCTGGTGGAA
GGGGCGGTAACCATTGCGCCTCAGGCGACGCTGACCATCGAGCCTGGGACGGTACTGCGCTTCAGGGGGAAGGAGCCTTC
CGGCGCGGTGCTCGTGGTGCAGGGGCGGTTGGCGGCTGCCGGAACCAAGGAATCCCCCATCGTCTTCACCTCAAGCTTTG
CCGTGCCCGCCGCAGGGGACTGGCAGGGGGTGATGCTCCTGGGGAGCGAGAAGAGAAACGTCCTTGAGAACTGCCGCATC
GACGCCGCGCAGACCGGGCTCGAAGCTATTTTCTCCAACCTGACGCTGAAGAGCGTGCGGGCCGAGCGGAGCAAGACCGG
GATGAGGTTTCAGGACGCCCTGGTTGTGATGGAGGGGGGCGGGGCCAGCGACTGCGATACCGGCCTCAACTTCTCCGAGA
GCGAGGCGACCCTACGCAACCTGAACCTGATTGGAAACCGCAAAGGGCTCGTCGCCCAGCGCAGTTCCATTTATATGCAG
GAGGGAAGCCTTTCCATGAACGGCTCCGCTTTCTCGTGCGACAGCTGCCGGGTCAGGTTGCAAGGGGGGGCTGTGTCGGA
CAACGCCAGAGGTATCACCCTGTACGAGAGCGAAGGGGCGGTCACCGGTGTTCAGGTAGCGCGCAACAGCGACTACGGCA
TTTCGCTCACCGCATCCCGGATAAGGGTCACGGCGAACCAGATGACCGGCAACGGCAACAGCGGCCTGTTGGTCTTCGAC
GGCTCTTCCGTCGCCTGGGACAACGCCATCCACGACAACGGCTACGACGTTTACAACGCCGGCAAGGAGGAGTTCCGGGC
GCCGGGCAACTGGTGGGGGGCGGCCGGGCCAAAGATTTATGACAACGGTGGAGCGGGGAAGGTCATATTCACCCCGCGGC
TGACAGCACCGCCTGAAGCAGGTTCCAAAGAAAAACCCTAA

Upstream 100 bases:

>100_bases
TGGACGAACTCTTCAACATCGTCGATTCGCTCCTTTACCTTGCCAAGCGCTGCGGCAAGAACAAGGTCTATCACCAGGAA
AGCCTACAGATCCCCGCGCC

Downstream 100 bases:

>100_bases
ACTTTTTACCCAGAGAGGATGGAGATACATGATACGCAGAGAAGGCCGCGCGGCCAACGCCTTGAGAGAAGTTAAGATCA
CCCGCAATTACCTGAAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Parallel Beta-Helix Repeat-Containing Protein; Parallel Beta-Helix Repeat Protein

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MNRYRIHCLPGLLLVGALYFGAPVLAATPTPAAAPGAAEAAQPKTEAAQPRTEAEFIPSFRYGDRVLTEDTVWKGVVLVE
GAVTIAPQATLTIEPGTVLRFRGKEPSGAVLVVQGRLAAAGTKESPIVFTSSFAVPAAGDWQGVMLLGSEKRNVLENCRI
DAAQTGLEAIFSNLTLKSVRAERSKTGMRFQDALVVMEGGGASDCDTGLNFSESEATLRNLNLIGNRKGLVAQRSSIYMQ
EGSLSMNGSAFSCDSCRVRLQGGAVSDNARGITLYESEGAVTGVQVARNSDYGISLTASRIRVTANQMTGNGNSGLLVFD
GSSVAWDNAIHDNGYDVYNAGKEEFRAPGNWWGAAGPKIYDNGGAGKVIFTPRLTAPPEAGSKEKP

Sequences:

>Translated_386_residues
MNRYRIHCLPGLLLVGALYFGAPVLAATPTPAAAPGAAEAAQPKTEAAQPRTEAEFIPSFRYGDRVLTEDTVWKGVVLVE
GAVTIAPQATLTIEPGTVLRFRGKEPSGAVLVVQGRLAAAGTKESPIVFTSSFAVPAAGDWQGVMLLGSEKRNVLENCRI
DAAQTGLEAIFSNLTLKSVRAERSKTGMRFQDALVVMEGGGASDCDTGLNFSESEATLRNLNLIGNRKGLVAQRSSIYMQ
EGSLSMNGSAFSCDSCRVRLQGGAVSDNARGITLYESEGAVTGVQVARNSDYGISLTASRIRVTANQMTGNGNSGLLVFD
GSSVAWDNAIHDNGYDVYNAGKEEFRAPGNWWGAAGPKIYDNGGAGKVIFTPRLTAPPEAGSKEKP
>Mature_386_residues
MNRYRIHCLPGLLLVGALYFGAPVLAATPTPAAAPGAAEAAQPKTEAAQPRTEAEFIPSFRYGDRVLTEDTVWKGVVLVE
GAVTIAPQATLTIEPGTVLRFRGKEPSGAVLVVQGRLAAAGTKESPIVFTSSFAVPAAGDWQGVMLLGSEKRNVLENCRI
DAAQTGLEAIFSNLTLKSVRAERSKTGMRFQDALVVMEGGGASDCDTGLNFSESEATLRNLNLIGNRKGLVAQRSSIYMQ
EGSLSMNGSAFSCDSCRVRLQGGAVSDNARGITLYESEGAVTGVQVARNSDYGISLTASRIRVTANQMTGNGNSGLLVFD
GSSVAWDNAIHDNGYDVYNAGKEEFRAPGNWWGAAGPKIYDNGGAGKVIFTPRLTAPPEAGSKEKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40667; Mature: 40667

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRYRIHCLPGLLLVGALYFGAPVLAATPTPAAAPGAAEAAQPKTEAAQPRTEAEFIPSF
CCCEEEEECHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCCHHHCCCC
RYGDRVLTEDTVWKGVVLVEGAVTIAPQATLTIEPGTVLRFRGKEPSGAVLVVQGRLAAA
CCCCEEECCCCCCCCEEEEECCEEECCCEEEEECCCEEEEECCCCCCCCEEEEECCEEEC
GTKESPIVFTSSFAVPAAGDWQGVMLLGSEKRNVLENCRIDAAQTGLEAIFSNLTLKSVR
CCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHH
AERSKTGMRFQDALVVMEGGGASDCDTGLNFSESEATLRNLNLIGNRKGLVAQRSSIYMQ
HHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHEEEECCCCCCEEECCEEEEE
EGSLSMNGSAFSCDSCRVRLQGGAVSDNARGITLYESEGAVTGVQVARNSDYGISLTASR
CCCEEECCCEEECCCEEEEEECCEECCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEEE
IRVTANQMTGNGNSGLLVFDGSSVAWDNAIHDNGYDVYNAGKEEFRAPGNWWGAAGPKIY
EEEEEEEECCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEE
DNGGAGKVIFTPRLTAPPEAGSKEKP
ECCCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRYRIHCLPGLLLVGALYFGAPVLAATPTPAAAPGAAEAAQPKTEAAQPRTEAEFIPSF
CCCEEEEECHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCCHHHCCCC
RYGDRVLTEDTVWKGVVLVEGAVTIAPQATLTIEPGTVLRFRGKEPSGAVLVVQGRLAAA
CCCCEEECCCCCCCCEEEEECCEEECCCEEEEECCCEEEEECCCCCCCCEEEEECCEEEC
GTKESPIVFTSSFAVPAAGDWQGVMLLGSEKRNVLENCRIDAAQTGLEAIFSNLTLKSVR
CCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHH
AERSKTGMRFQDALVVMEGGGASDCDTGLNFSESEATLRNLNLIGNRKGLVAQRSSIYMQ
HHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHEEEECCCCCCEEECCEEEEE
EGSLSMNGSAFSCDSCRVRLQGGAVSDNARGITLYESEGAVTGVQVARNSDYGISLTASR
CCCEEECCCEEECCCEEEEEECCEECCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEEE
IRVTANQMTGNGNSGLLVFDGSSVAWDNAIHDNGYDVYNAGKEEFRAPGNWWGAAGPKIY
EEEEEEEECCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEE
DNGGAGKVIFTPRLTAPPEAGSKEKP
ECCCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA