| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is qor [H]
Identifier: 197117579
GI number: 197117579
Start: 1383303
End: 1384274
Strand: Direct
Name: qor [H]
Synonym: Gbem_1191
Alternate gene names: 197117579
Gene position: 1383303-1384274 (Clockwise)
Preceding gene: 197117575
Following gene: 197117580
Centisome position: 29.97
GC content: 62.55
Gene sequence:
>972_bases ATGACGAAGGCGATCTGCTTCAAAGAGTTTGGCGGACCGGAGGTGCTTACCTTTAGTGATATCGAGGTGAGATCTCCCGG CCCTGGAGAGGTGCTGGTCAGCCACAAAGCCGTTGGCGTCAATTTTGTGGATGTCTATCAGCGCAATGGACTCTATAAGG TGGCGCTGCCGGCTGTCGCCGGTAACGAAGGGGCCGGTGTGGTCGAGGCTGTCGGGGAGGGGGTGACGCTGGTCAAGCCG GGCGACCGGGTCGCCTACGCCGGCGCGCTTGGGTCCTACTGCCAGAAGAGGATAATTCCCGCGGACCGGGTGGTTCTCAT GCCCGACTCCATCGGCTTCGAGCAGGCGGCAGCGATGATGCTGAAGGGGCTCACCGTACAGTACCTCATCAGGAGGACCT ACCGGGTTCAGCAGGGCGAGACGGTGGTTTTTCATGCCGCAGCCGGCGGCGTCGGGCTCATCGCCTGCCAGTGGCTGAAA CACCTGGGGGCGAGGGTCATCGGCACCGCAGGTTCCGAAGAGAAGTGCGAACTGGCGCGGCGGCACGGCGCCGAGACCTG CCTCAATTACCGCACTGACAGCATCGTCGAAAGAGTCAGGGAAATCACCAAGGGCGAGGGGGTCCCCGTAGTCTACGACG GCGTCGGCAAGGACACCTTCGATACCTCGCTTCGCTGCCTGCGTCCTTTCGGGTTGCTGGTCAGCTTCGGCAACGCGTCC GGGCCGCTGCCGCCGGTAGACCTGAGCATCCTCTCCCAACTTGGATCGCTCTACCTGACCCGCCCCACGCTTAATACCTA TGCCGCCAAGCGCGCCGACCTGGAACAGATGGCTGGCGAGCTGTTCCAGGTGGTTGTTTCCGGCGCCGTCAAAGTGGAGA TCAACCAGCGCTATCCCCTGCAAGATGCCGCGCAGGCACATCGCGACCTTGAGGCCCGTAAAACCACGGGGTGCACCATA CTGCTTCCTTGA
Upstream 100 bases:
>100_bases TGAGCGTCGCTTTTTGCATCCTCCTCTGCCTGGAGTTTGCGCAGGGTTAGGGTATCTTCTTCTGGTTGCTTTTCCCAGAA CCGCTGTCCGAGGAGGAATC
Downstream 100 bases:
>100_bases TCAGGCTCACCGGTATGGATGACTGCCTTTAATTAGCGAAAACAAAATGGAAAACCGGGCCTGGTTCAGGTATCTTCGTG GTCGTAGCAGGAATTAAACG
Product: NADPH:quinone oxidoreductase-like zinc-containing oxidoreductase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTKAICFKEFGGPEVLTFSDIEVRSPGPGEVLVSHKAVGVNFVDVYQRNGLYKVALPAVAGNEGAGVVEAVGEGVTLVKP GDRVAYAGALGSYCQKRIIPADRVVLMPDSIGFEQAAAMMLKGLTVQYLIRRTYRVQQGETVVFHAAAGGVGLIACQWLK HLGARVIGTAGSEEKCELARRHGAETCLNYRTDSIVERVREITKGEGVPVVYDGVGKDTFDTSLRCLRPFGLLVSFGNAS GPLPPVDLSILSQLGSLYLTRPTLNTYAAKRADLEQMAGELFQVVVSGAVKVEINQRYPLQDAAQAHRDLEARKTTGCTI LLP
Sequences:
>Translated_323_residues MTKAICFKEFGGPEVLTFSDIEVRSPGPGEVLVSHKAVGVNFVDVYQRNGLYKVALPAVAGNEGAGVVEAVGEGVTLVKP GDRVAYAGALGSYCQKRIIPADRVVLMPDSIGFEQAAAMMLKGLTVQYLIRRTYRVQQGETVVFHAAAGGVGLIACQWLK HLGARVIGTAGSEEKCELARRHGAETCLNYRTDSIVERVREITKGEGVPVVYDGVGKDTFDTSLRCLRPFGLLVSFGNAS GPLPPVDLSILSQLGSLYLTRPTLNTYAAKRADLEQMAGELFQVVVSGAVKVEINQRYPLQDAAQAHRDLEARKTTGCTI LLP >Mature_322_residues TKAICFKEFGGPEVLTFSDIEVRSPGPGEVLVSHKAVGVNFVDVYQRNGLYKVALPAVAGNEGAGVVEAVGEGVTLVKPG DRVAYAGALGSYCQKRIIPADRVVLMPDSIGFEQAAAMMLKGLTVQYLIRRTYRVQQGETVVFHAAAGGVGLIACQWLKH LGARVIGTAGSEEKCELARRHGAETCLNYRTDSIVERVREITKGEGVPVVYDGVGKDTFDTSLRCLRPFGLLVSFGNASG PLPPVDLSILSQLGSLYLTRPTLNTYAAKRADLEQMAGELFQVVVSGAVKVEINQRYPLQDAAQAHRDLEARKTTGCTIL LP
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=328, Percent_Identity=30.4878048780488, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI13236495, Length=328, Percent_Identity=30.4878048780488, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI18379349, Length=306, Percent_Identity=30.718954248366, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI194239676, Length=327, Percent_Identity=29.3577981651376, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI22538446, Length=336, Percent_Identity=30.952380952381, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI22538444, Length=336, Percent_Identity=30.952380952381, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI28557745, Length=294, Percent_Identity=30.6122448979592, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI24308257, Length=241, Percent_Identity=29.8755186721992, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI197927207, Length=189, Percent_Identity=26.4550264550265, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI47519420, Length=242, Percent_Identity=28.099173553719, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI67078404, Length=170, Percent_Identity=30.5882352941176, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI67078406, Length=127, Percent_Identity=33.0708661417323, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1790485, Length=327, Percent_Identity=50.4587155963303, Blast_Score=328, Evalue=4e-91, Organism=Escherichia coli, GI87081918, Length=333, Percent_Identity=26.4264264264264, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17507255, Length=248, Percent_Identity=30.241935483871, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI133901712, Length=264, Percent_Identity=29.1666666666667, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI133901710, Length=264, Percent_Identity=29.1666666666667, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17556000, Length=181, Percent_Identity=28.1767955801105, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17536829, Length=313, Percent_Identity=26.8370607028754, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=322, Percent_Identity=38.1987577639752, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6324486, Length=321, Percent_Identity=28.3489096573209, Blast_Score=89, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6323729, Length=339, Percent_Identity=25.6637168141593, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6323961, Length=321, Percent_Identity=27.4143302180685, Blast_Score=86, Evalue=9e-18, Organism=Drosophila melanogaster, GI45550423, Length=318, Percent_Identity=23.8993710691824, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34679; Mature: 34548
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAICFKEFGGPEVLTFSDIEVRSPGPGEVLVSHKAVGVNFVDVYQRNGLYKVALPAVA CCCCEEEHHCCCCEEEEECCEEECCCCCCCEEEEEEECCCCHHHHHHCCCEEEEEEEEEC GNEGAGVVEAVGEGVTLVKPGDRVAYAGALGSYCQKRIIPADRVVLMPDSIGFEQAAAMM CCCCCCHHHHHCCCEEEECCCCCEEEHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHH LKGLTVQYLIRRTYRVQQGETVVFHAAAGGVGLIACQWLKHLGARVIGTAGSEEKCELAR HHCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHH RHGAETCLNYRTDSIVERVREITKGEGVPVVYDGVGKDTFDTSLRCLRPFGLLVSFGNAS HCCHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHEEECCCCC GPLPPVDLSILSQLGSLYLTRPTLNTYAAKRADLEQMAGELFQVVVSGAVKVEINQRYPL CCCCCCCHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCH QDAAQAHRDLEARKTTGCTILLP HHHHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure TKAICFKEFGGPEVLTFSDIEVRSPGPGEVLVSHKAVGVNFVDVYQRNGLYKVALPAVA CCCEEEHHCCCCEEEEECCEEECCCCCCCEEEEEEECCCCHHHHHHCCCEEEEEEEEEC GNEGAGVVEAVGEGVTLVKPGDRVAYAGALGSYCQKRIIPADRVVLMPDSIGFEQAAAMM CCCCCCHHHHHCCCEEEECCCCCEEEHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHH LKGLTVQYLIRRTYRVQQGETVVFHAAAGGVGLIACQWLKHLGARVIGTAGSEEKCELAR HHCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHH RHGAETCLNYRTDSIVERVREITKGEGVPVVYDGVGKDTFDTSLRCLRPFGLLVSFGNAS HCCHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHEEECCCCC GPLPPVDLSILSQLGSLYLTRPTLNTYAAKRADLEQMAGELFQVVVSGAVKVEINQRYPL CCCCCCCHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCH QDAAQAHRDLEARKTTGCTILLP HHHHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]