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The map label for this gene is omcS-1

Identifier: 197117505

GI number: 197117505

Start: 1290030

End: 1291355

Strand: Direct

Name: omcS-1

Synonym: Gbem_1116

Alternate gene names: NA

Gene position: 1290030-1291355 (Clockwise)

Preceding gene: 197117504

Following gene: 197117506

Centisome position: 27.95

GC content: 61.76

Gene sequence:

>1326_bases
ATGAAACTGACCAAGATTCTCGCAACAACCGCAGTCCTCAGTCTTGCTACCGCTGGTAGCGCCCTTGCTTTCCACTCCGG
CGGCGTCGCCGAGTGCGAAGGTTGCCACTCCATGCACAACTCGTATGAAGGTGCAGCCAATGTGACCGGCATGGCCCAGT
ATCAGTCCGGCCCGTACCTCCTGAAAGCTCAGGACCAGTCCGGTGCTTGCCTCAACTGCCACCAGGCTGCCGACACCACC
CCGGGCCCCGTTACCGGTAAGGACAATGGCTACCACATCTCCACCGCAAACGTTGTTGCAGCTGACAGCACCACCCCGGT
CGAGCTGACCCCGGGCGGCGACTTCGCTTGGCTCAAGAAGACCATGAGCGGCTCCATCCGCGGCACGGCTACCTCTTGGG
AAGGCGATCGTCACGGCCACAACGTGATCGCTGTCGACTTCGGCTACACCCAGGACAAGGTTCTGACTGCTGCCCCTGGT
GGCACCTACCCGGCAGCCAACCTGGCCTGCTCCTCCTGCCACGATCCCCATGGCAAGTACCGTCGTCTTGCCGACGGCAC
CAAGGCCACTACCGGTCTGCCGATTTTCAACTCCGGTTCCTACGTCAACAGCAAAGACCCGATCGCCAGTGTTTCCGCCG
TCGGCGTGTACCGCCTCCTCGCAGGCGTGGGCTACCAGCCGAAGTCCCTTACCGGCTCCTACGCCTTCGCTAACCCGTCT
CCGGACGCAGTTGCTCCGGCCAGCTACAACGGTCTCAACGACACCATCGCAGGCGGTAAAGACCGCGTTGCTTACGGCCA
GGGTATGTCCGAGTGGTGTGCTAACTGCCACACCGCAATGCACAATGACACCTACACCTCCGGCACCAAAAGCCTGGTTC
ACCCGGCAGGTAACGGCGGCAAGCTGACCGGCGCCATCGCCGGCAACTACAACGCCTATGTTTCCTCCGGCATCAACGGC
ACCCCGGCTTCCAACGGCTACAGCGCCCTGGCTCCGTTCGAACTCGGTTCTGGCGACTACGCCGCCATCAAAACCTTCCA
GGCTGCTCCGGCTGCCGCCAGCACCAGCAACAACGTGCTCTGCCTCTCCTGCCACCGCGCTCACGCTTCCGGCTTTGAGA
GCATGGCCCGCTACTACCTGGGCAACGAGTTCATGACCGTAGCTGACGCAAGCAACGCAGCCGCTTACGACTCCAGCACC
ACCGAGAACAAGATCAACACCGGCTACAGCGTCACCCAGCAGCAGAACGCTTACAACGGTCGTCCGGCTTCCCTCTTCGG
ACCGTACGCACGTGACTACTGCAACAAGTGCCACGCTAAAGACTAG

Upstream 100 bases:

>100_bases
CTATATGGATGACAAGAACGGTCAAGTAGCAAAATTTCGAGTAGCACCGTGTAATGCAGTTGAAATCCACTGGCAGTACA
AACTAAAAAGGAGAGAACAA

Downstream 100 bases:

>100_bases
TACGACAGCCTGATACTGTGTCATGTCATGAAGGGCCGGCTTAATGCCGGCCCTTTTTTTGTCTTTTCTTTACCATAATC
CTTTGACTTTGTGGCGCGTT

Product: cytochrome c

Products: NA

Alternate protein names: Cytochrome C

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MKLTKILATTAVLSLATAGSALAFHSGGVAECEGCHSMHNSYEGAANVTGMAQYQSGPYLLKAQDQSGACLNCHQAADTT
PGPVTGKDNGYHISTANVVAADSTTPVELTPGGDFAWLKKTMSGSIRGTATSWEGDRHGHNVIAVDFGYTQDKVLTAAPG
GTYPAANLACSSCHDPHGKYRRLADGTKATTGLPIFNSGSYVNSKDPIASVSAVGVYRLLAGVGYQPKSLTGSYAFANPS
PDAVAPASYNGLNDTIAGGKDRVAYGQGMSEWCANCHTAMHNDTYTSGTKSLVHPAGNGGKLTGAIAGNYNAYVSSGING
TPASNGYSALAPFELGSGDYAAIKTFQAAPAAASTSNNVLCLSCHRAHASGFESMARYYLGNEFMTVADASNAAAYDSST
TENKINTGYSVTQQQNAYNGRPASLFGPYARDYCNKCHAKD

Sequences:

>Translated_441_residues
MKLTKILATTAVLSLATAGSALAFHSGGVAECEGCHSMHNSYEGAANVTGMAQYQSGPYLLKAQDQSGACLNCHQAADTT
PGPVTGKDNGYHISTANVVAADSTTPVELTPGGDFAWLKKTMSGSIRGTATSWEGDRHGHNVIAVDFGYTQDKVLTAAPG
GTYPAANLACSSCHDPHGKYRRLADGTKATTGLPIFNSGSYVNSKDPIASVSAVGVYRLLAGVGYQPKSLTGSYAFANPS
PDAVAPASYNGLNDTIAGGKDRVAYGQGMSEWCANCHTAMHNDTYTSGTKSLVHPAGNGGKLTGAIAGNYNAYVSSGING
TPASNGYSALAPFELGSGDYAAIKTFQAAPAAASTSNNVLCLSCHRAHASGFESMARYYLGNEFMTVADASNAAAYDSST
TENKINTGYSVTQQQNAYNGRPASLFGPYARDYCNKCHAKD
>Mature_441_residues
MKLTKILATTAVLSLATAGSALAFHSGGVAECEGCHSMHNSYEGAANVTGMAQYQSGPYLLKAQDQSGACLNCHQAADTT
PGPVTGKDNGYHISTANVVAADSTTPVELTPGGDFAWLKKTMSGSIRGTATSWEGDRHGHNVIAVDFGYTQDKVLTAAPG
GTYPAANLACSSCHDPHGKYRRLADGTKATTGLPIFNSGSYVNSKDPIASVSAVGVYRLLAGVGYQPKSLTGSYAFANPS
PDAVAPASYNGLNDTIAGGKDRVAYGQGMSEWCANCHTAMHNDTYTSGTKSLVHPAGNGGKLTGAIAGNYNAYVSSGING
TPASNGYSALAPFELGSGDYAAIKTFQAAPAAASTSNNVLCLSCHRAHASGFESMARYYLGNEFMTVADASNAAAYDSST
TENKINTGYSVTQQQNAYNGRPASLFGPYARDYCNKCHAKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45603; Mature: 45603

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTKILATTAVLSLATAGSALAFHSGGVAECEGCHSMHNSYEGAANVTGMAQYQSGPYL
CCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEE
LKAQDQSGACLNCHQAADTTPGPVTGKDNGYHISTANVVAADSTTPVELTPGGDFAWLKK
EEECCCCCCEEECHHCCCCCCCCCCCCCCCEEEEECEEEEECCCCCEEECCCCCHHHHHH
TMSGSIRGTATSWEGDRHGHNVIAVDFGYTQDKVLTAAPGGTYPAANLACSSCHDPHGKY
HHCCCCEECEECCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHHCCCCCCHHH
RRLADGTKATTGLPIFNSGSYVNSKDPIASVSAVGVYRLLAGVGYQPKSLTGSYAFANPS
HHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCC
PDAVAPASYNGLNDTIAGGKDRVAYGQGMSEWCANCHTAMHNDTYTSGTKSLVHPAGNGG
CCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCC
KLTGAIAGNYNAYVSSGINGTPASNGYSALAPFELGSGDYAAIKTFQAAPAAASTSNNVL
EEEEEEECCCCEEEECCCCCCCCCCCCCEECCEECCCCCCCEEEEECCCCCCCCCCCCEE
CLSCHRAHASGFESMARYYLGNEFMTVADASNAAAYDSSTTENKINTGYSVTQQQNAYNG
EEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
RPASLFGPYARDYCNKCHAKD
CCCHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLTKILATTAVLSLATAGSALAFHSGGVAECEGCHSMHNSYEGAANVTGMAQYQSGPYL
CCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEE
LKAQDQSGACLNCHQAADTTPGPVTGKDNGYHISTANVVAADSTTPVELTPGGDFAWLKK
EEECCCCCCEEECHHCCCCCCCCCCCCCCCEEEEECEEEEECCCCCEEECCCCCHHHHHH
TMSGSIRGTATSWEGDRHGHNVIAVDFGYTQDKVLTAAPGGTYPAANLACSSCHDPHGKY
HHCCCCEECEECCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHHHCCCCCCHHH
RRLADGTKATTGLPIFNSGSYVNSKDPIASVSAVGVYRLLAGVGYQPKSLTGSYAFANPS
HHHCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCC
PDAVAPASYNGLNDTIAGGKDRVAYGQGMSEWCANCHTAMHNDTYTSGTKSLVHPAGNGG
CCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCC
KLTGAIAGNYNAYVSSGINGTPASNGYSALAPFELGSGDYAAIKTFQAAPAAASTSNNVL
EEEEEEECCCCEEEECCCCCCCCCCCCCEECCEECCCCCCCEEEEECCCCCCCCCCCCEE
CLSCHRAHASGFESMARYYLGNEFMTVADASNAAAYDSSTTENKINTGYSVTQQQNAYNG
EEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
RPASLFGPYARDYCNKCHAKD
CCCHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA