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The map label for this gene is 197117504

Identifier: 197117504

GI number: 197117504

Start: 1288708

End: 1289661

Strand: Direct

Name: 197117504

Synonym: Gbem_1115

Alternate gene names: NA

Gene position: 1288708-1289661 (Clockwise)

Preceding gene: 197117503

Following gene: 197117505

Centisome position: 27.92

GC content: 58.6

Gene sequence:

>954_bases
ATGGATTACACAATATCTCGTTTAGCACGGTCCTTAAGGACGGCGGTGTCACTGCTATTACTTGGCGCAGCGCCGTCAAT
GGCTGGAGACATAAACGCCTCCTATCTTTTCAACCTGTCCGACTTCGACGGGATCATCCCTTACAACGCCGCCAGGACTT
TTGTGGATGAGGTGCGGGGCGAGGTCTACGTCGCCACCAGCGGCGGGCTGGATATCTACAACCCCAGCGGCATGCTGACC
TTCCACGTCGACTATGACCGCGAACTTGGTGGGGTGTATGATGCCGCAGTCGACGACAGTGGCAACATCCTGCTGCTGAC
CAACAAGAAAGGGGACTATGGCATCGTAACCTGCAATTACCGCGGCGAACCCCTTTCTTCAGTGGCCTTGCGGCATGTTC
CGCCTGAGTTTACCGAGGTGCGCCCCGGTCGGATGATCGTGCGCCACGGTGAAATCTACCTCATAGACCAGGGTGGCATG
TTGGTCGTCGTCGTGAATACAGACGGGGAGTTCGTCCGGGCGTACGACCTTGGGGCATTGATGCTGGTTTCCGACGACCA
CCGGGCCGATGCAGGAGTGGAGGGGTTCACTATCGACCGTGAGGGGCACATGCTCTTCGTCTCTTCTTCCTTCGGCAAGG
CATACCGGGGCACCATGGACGGCGTGATCTCTGCGTTTGGCAGGAGGGGGAGTTCCGCGGGCAAGTTCGGCGTGCCCGGC
GGGATTGCCTCGGACCGGAACGGCAACCTCCTCATAACCGACAAGCTGCGTGGCGTGACCATGATCTACGACAAGGATTT
CAGGTTCATCAAAGAGTTCGGTTTCCGCGGCACCAGGCCCGGCAACGTGATCGTGCCCAACGAGATCAGCGTGGACCCTC
TGCGCAACCGAGTCTACGTGAGCCAAATGCGGCGCCGTGGCGTGAATATATACCAGTTGAGCTACAGCGACTGA

Upstream 100 bases:

>100_bases
TAATAGTTGGGCTAAGACAGCTCTGTGATTGACACAGGGGAGGATGTCGGCTTAGACTCCGCATCAGTGCGCGGAGATTT
CACCTGAAAAGGGAACGGTT

Downstream 100 bases:

>100_bases
TATCCCGGACTTTTCGCCGCTTCAACACGGAAAAGCCCCGCCCCAGAAGGCGGGGCTTTTTCTGTTTGGGGATGGCCTCG
GTCGGTTCCGTCCCGGCGGC

Product: NHL repeat domain-containing protein

Products: NA

Alternate protein names: NHL Repeat Containing Protein; NHL Repeat Domain-Containing Protein; NHL Repeat Domain Protein

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MDYTISRLARSLRTAVSLLLLGAAPSMAGDINASYLFNLSDFDGIIPYNAARTFVDEVRGEVYVATSGGLDIYNPSGMLT
FHVDYDRELGGVYDAAVDDSGNILLLTNKKGDYGIVTCNYRGEPLSSVALRHVPPEFTEVRPGRMIVRHGEIYLIDQGGM
LVVVVNTDGEFVRAYDLGALMLVSDDHRADAGVEGFTIDREGHMLFVSSSFGKAYRGTMDGVISAFGRRGSSAGKFGVPG
GIASDRNGNLLITDKLRGVTMIYDKDFRFIKEFGFRGTRPGNVIVPNEISVDPLRNRVYVSQMRRRGVNIYQLSYSD

Sequences:

>Translated_317_residues
MDYTISRLARSLRTAVSLLLLGAAPSMAGDINASYLFNLSDFDGIIPYNAARTFVDEVRGEVYVATSGGLDIYNPSGMLT
FHVDYDRELGGVYDAAVDDSGNILLLTNKKGDYGIVTCNYRGEPLSSVALRHVPPEFTEVRPGRMIVRHGEIYLIDQGGM
LVVVVNTDGEFVRAYDLGALMLVSDDHRADAGVEGFTIDREGHMLFVSSSFGKAYRGTMDGVISAFGRRGSSAGKFGVPG
GIASDRNGNLLITDKLRGVTMIYDKDFRFIKEFGFRGTRPGNVIVPNEISVDPLRNRVYVSQMRRRGVNIYQLSYSD
>Mature_317_residues
MDYTISRLARSLRTAVSLLLLGAAPSMAGDINASYLFNLSDFDGIIPYNAARTFVDEVRGEVYVATSGGLDIYNPSGMLT
FHVDYDRELGGVYDAAVDDSGNILLLTNKKGDYGIVTCNYRGEPLSSVALRHVPPEFTEVRPGRMIVRHGEIYLIDQGGM
LVVVVNTDGEFVRAYDLGALMLVSDDHRADAGVEGFTIDREGHMLFVSSSFGKAYRGTMDGVISAFGRRGSSAGKFGVPG
GIASDRNGNLLITDKLRGVTMIYDKDFRFIKEFGFRGTRPGNVIVPNEISVDPLRNRVYVSQMRRRGVNIYQLSYSD

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34774; Mature: 34774

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYTISRLARSLRTAVSLLLLGAAPSMAGDINASYLFNLSDFDGIIPYNAARTFVDEVRG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCC
EVYVATSGGLDIYNPSGMLTFHVDYDRELGGVYDAAVDDSGNILLLTNKKGDYGIVTCNY
CEEEEECCCEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEC
RGEPLSSVALRHVPPEFTEVRPGRMIVRHGEIYLIDQGGMLVVVVNTDGEFVRAYDLGAL
CCCCHHHHHHHCCCCHHHCCCCCEEEEEECCEEEEECCCEEEEEECCCCCEEEEEECCEE
MLVSDDHRADAGVEGFTIDREGHMLFVSSSFGKAYRGTMDGVISAFGRRGSSAGKFGVPG
EEEECCCCCCCCCCCEEEECCCCEEEEECCCCCHHCCHHHHHHHHHCCCCCCCCCCCCCC
GIASDRNGNLLITDKLRGVTMIYDKDFRFIKEFGFRGTRPGNVIVPNEISVDPLRNRVYV
CCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHH
SQMRRRGVNIYQLSYSD
HHHHHCCCEEEEEEECC
>Mature Secondary Structure
MDYTISRLARSLRTAVSLLLLGAAPSMAGDINASYLFNLSDFDGIIPYNAARTFVDEVRG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCC
EVYVATSGGLDIYNPSGMLTFHVDYDRELGGVYDAAVDDSGNILLLTNKKGDYGIVTCNY
CEEEEECCCEEEECCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEEC
RGEPLSSVALRHVPPEFTEVRPGRMIVRHGEIYLIDQGGMLVVVVNTDGEFVRAYDLGAL
CCCCHHHHHHHCCCCHHHCCCCCEEEEEECCEEEEECCCEEEEEECCCCCEEEEEECCEE
MLVSDDHRADAGVEGFTIDREGHMLFVSSSFGKAYRGTMDGVISAFGRRGSSAGKFGVPG
EEEECCCCCCCCCCCEEEECCCCEEEEECCCCCHHCCHHHHHHHHHCCCCCCCCCCCCCC
GIASDRNGNLLITDKLRGVTMIYDKDFRFIKEFGFRGTRPGNVIVPNEISVDPLRNRVYV
CCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHH
SQMRRRGVNIYQLSYSD
HHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA