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The map label for this gene is hcp-1 [H]

Identifier: 197117423

GI number: 197117423

Start: 1203588

End: 1205294

Strand: Reverse

Name: hcp-1 [H]

Synonym: Gbem_1033

Alternate gene names: 197117423

Gene position: 1205294-1203588 (Counterclockwise)

Preceding gene: 197117424

Following gene: 197117419

Centisome position: 26.12

GC content: 61.63

Gene sequence:

>1707_bases
ATGAAGAACTTGATCAAAAACTTATTTGGATTTTCGACCTCAACCAACAACAATGAGAAAAAGGGGGAAACGATGGAAAA
CATGTTCTGCTTTCAGTGCGAACAGGCTGCAAACGGTGGTTGCTCCAAGGTAGGCGTCTGCGGCAAACAGCCGGACGTAG
CGGCACTGCAGGACCTGCTGGTCTACACCATGAAAGGGATCGCCTTCTGGGCGGACAAGGCCCGCGGCAAAGGCGTGAAG
AACGCCGAGATCGACCACTTCATGATTGACGGCCTCTTCACCACGGTCACCAACGTAGACTTCAGCGCTGAGGAAGTCGC
CAAGCTGGTGCGCAAAGGCGCCACGCTGCTCGAGAAAGCACAGACCCTCTTCGAGCAGGCCAACGGCGGCGCCTACGCCG
GCGCGGTCCCCGAAGCCGCCAAGGGATTCACCGCAACCTCAACCGCCGAGCTGGTCGCCCTGGGCGCCGCCCACGGGGTC
AAGTCTGACGCAATCGATGCGGACGTGAAATCGGTCCAGGAAATCATCGTCTACGGGATGAAAGGCTACGCAGCCTACGC
CCACCACGCGCTGGTGATCGGCCGCGAGAACGACGAGATCTACGCCTTCACCCACAAGGCGCTGGCAGCCACCCTTGACC
TGACCCTCGGCCTTATGGACTTCGTCGGCCTCGCCATGGAGTGCGGCCGCATCAACCTGGTGACCATGGAGCTCCTCGAC
AAAGCCAACACCGACAGCTTCGGCCACCCGGTACCGACCCCGGTACAGCTCGGCACCAAGGCGGGCAAGGCGATCCTCGT
TTCCGGCCACGACCTCCGTATGCTGGAAGAGCTCCTGAAGCAGACCGAAGGCAAAGGGATCAACATCTACACCCACGGCG
AGATGCTCCCGGCGCACGGCTACCCCGGCCTCAAGAAGTACGCGCACCTGGCAGGCAACTTCGGCGGCGCATGGCAGGAC
CAGGCCAAGGAATTCGTCAACTTCCCCGGCGCCATCATCTTCAACACCAACTGCATCCAGCGCCCGGCCGAAAGCTACAA
AGACCGCCTCTTCACCTGGGGCCTGGTACAGTGGCCGGACGTCAAGAACATCAACGGCATGGACTTCGCCCCGGTCATCG
AGAAGGCGCTCGCGCTTCCCGGCTTCGAAGAGAACCTCGGCCAGGAGATACTCACCGGCTTCGGACACAACGCGGTGCTC
GGCGTGGCCGACAAGGTCATCGCGGCGGTCAAGGCAGGCGACATCCGTCACTTCTTCCTGATCGGCGGCTGCGACGGCGC
GAAGAGCGGCCGTAACTACTACACCGAGTTCGCCGAGAATGTTCCGAAGGACTGCGTCATCCTGACTCTTGCCTGCGGCA
AGTACCGCTTCAACAAGCTCGACTTCGGCGACATCGGCGGCATCCCGCGCCTTCTGGACATCGGCCAGTGCAACGACGCC
TACTCCGCGATCCAGATCGCCGTGGCTCTCGCCGGCGCCTTCAACTGCGGCGTCAACGAGCTGCCGCTCTCCTTCATCCT
CTCCTGGTACGAGCAGAAGGCGGTGGCGATCCTCCTCACCTTGCTCCACCTGGGCGTGAAGAACATCAAGCTCGGACCGA
GCCTGCCGGCCTTCATCACCCCGAACGTCCTCAACTTCCTGGTTGAGAACTTCAACATCGGGCCGATCGGGACCGCCGAA
GGCGACCTGAAGCAGATCCTCGGCTAG

Upstream 100 bases:

>100_bases
TCCGGCTCCACATTTGCCGTTAATGTGGGTCCATCGAAAGACGGCACCCGTCACCCGGGCAACCAGGTACGGCCGAAGAT
AAAACGCCCAGGGAGAATGG

Downstream 100 bases:

>100_bases
AACCAACGGCCCTCACCACAGAGGGACACAGAGGTTCACAGAGGAAAACCAAGAACCATGACGTAAGAAGGCGGCCCCGG
ATTCGGGGCCGCCTTTTCTA

Product: hydroxylamine reductase

Products: NA

Alternate protein names: Hybrid-cluster protein; HCP [H]

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MKNLIKNLFGFSTSTNNNEKKGETMENMFCFQCEQAANGGCSKVGVCGKQPDVAALQDLLVYTMKGIAFWADKARGKGVK
NAEIDHFMIDGLFTTVTNVDFSAEEVAKLVRKGATLLEKAQTLFEQANGGAYAGAVPEAAKGFTATSTAELVALGAAHGV
KSDAIDADVKSVQEIIVYGMKGYAAYAHHALVIGRENDEIYAFTHKALAATLDLTLGLMDFVGLAMECGRINLVTMELLD
KANTDSFGHPVPTPVQLGTKAGKAILVSGHDLRMLEELLKQTEGKGINIYTHGEMLPAHGYPGLKKYAHLAGNFGGAWQD
QAKEFVNFPGAIIFNTNCIQRPAESYKDRLFTWGLVQWPDVKNINGMDFAPVIEKALALPGFEENLGQEILTGFGHNAVL
GVADKVIAAVKAGDIRHFFLIGGCDGAKSGRNYYTEFAENVPKDCVILTLACGKYRFNKLDFGDIGGIPRLLDIGQCNDA
YSAIQIAVALAGAFNCGVNELPLSFILSWYEQKAVAILLTLLHLGVKNIKLGPSLPAFITPNVLNFLVENFNIGPIGTAE
GDLKQILG

Sequences:

>Translated_568_residues
MKNLIKNLFGFSTSTNNNEKKGETMENMFCFQCEQAANGGCSKVGVCGKQPDVAALQDLLVYTMKGIAFWADKARGKGVK
NAEIDHFMIDGLFTTVTNVDFSAEEVAKLVRKGATLLEKAQTLFEQANGGAYAGAVPEAAKGFTATSTAELVALGAAHGV
KSDAIDADVKSVQEIIVYGMKGYAAYAHHALVIGRENDEIYAFTHKALAATLDLTLGLMDFVGLAMECGRINLVTMELLD
KANTDSFGHPVPTPVQLGTKAGKAILVSGHDLRMLEELLKQTEGKGINIYTHGEMLPAHGYPGLKKYAHLAGNFGGAWQD
QAKEFVNFPGAIIFNTNCIQRPAESYKDRLFTWGLVQWPDVKNINGMDFAPVIEKALALPGFEENLGQEILTGFGHNAVL
GVADKVIAAVKAGDIRHFFLIGGCDGAKSGRNYYTEFAENVPKDCVILTLACGKYRFNKLDFGDIGGIPRLLDIGQCNDA
YSAIQIAVALAGAFNCGVNELPLSFILSWYEQKAVAILLTLLHLGVKNIKLGPSLPAFITPNVLNFLVENFNIGPIGTAE
GDLKQILG
>Mature_568_residues
MKNLIKNLFGFSTSTNNNEKKGETMENMFCFQCEQAANGGCSKVGVCGKQPDVAALQDLLVYTMKGIAFWADKARGKGVK
NAEIDHFMIDGLFTTVTNVDFSAEEVAKLVRKGATLLEKAQTLFEQANGGAYAGAVPEAAKGFTATSTAELVALGAAHGV
KSDAIDADVKSVQEIIVYGMKGYAAYAHHALVIGRENDEIYAFTHKALAATLDLTLGLMDFVGLAMECGRINLVTMELLD
KANTDSFGHPVPTPVQLGTKAGKAILVSGHDLRMLEELLKQTEGKGINIYTHGEMLPAHGYPGLKKYAHLAGNFGGAWQD
QAKEFVNFPGAIIFNTNCIQRPAESYKDRLFTWGLVQWPDVKNINGMDFAPVIEKALALPGFEENLGQEILTGFGHNAVL
GVADKVIAAVKAGDIRHFFLIGGCDGAKSGRNYYTEFAENVPKDCVILTLACGKYRFNKLDFGDIGGIPRLLDIGQCNDA
YSAIQIAVALAGAFNCGVNELPLSFILSWYEQKAVAILLTLLHLGVKNIKLGPSLPAFITPNVLNFLVENFNIGPIGTAE
GDLKQILG

Specific function: Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O [H]

COG id: COG1151

COG function: function code C; 6Fe-6S prismane cluster-containing protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HCP family [H]

Homologues:

Organism=Escherichia coli, GI87081794, Length=551, Percent_Identity=47.5499092558984, Blast_Score=510, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010048
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099
- InterPro:   IPR016100 [H]

Pfam domain/function: PF03063 Prismane [H]

EC number: NA

Molecular weight: Translated: 61083; Mature: 61083

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLIKNLFGFSTSTNNNEKKGETMENMFCFQCEQAANGGCSKVGVCGKQPDVAALQDLL
CHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
VYTMKGIAFWADKARGKGVKNAEIDHFMIDGLFTTVTNVDFSAEEVAKLVRKGATLLEKA
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
QTLFEQANGGAYAGAVPEAAKGFTATSTAELVALGAAHGVKSDAIDADVKSVQEIIVYGM
HHHHHHCCCCEEECCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
KGYAAYAHHALVIGRENDEIYAFTHKALAATLDLTLGLMDFVGLAMECGRINLVTMELLD
CHHHHHHCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH
KANTDSFGHPVPTPVQLGTKAGKAILVSGHDLRMLEELLKQTEGKGINIYTHGEMLPAHG
CCCCCCCCCCCCCCHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCEECCCC
YPGLKKYAHLAGNFGGAWQDQAKEFVNFPGAIIFNTNCIQRPAESYKDRLFTWGLVQWPD
CCHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCHHHHCHHHHHHHHHEECCCEECCC
VKNINGMDFAPVIEKALALPGFEENLGQEILTGFGHNAVLGVADKVIAAVKAGDIRHFFL
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEE
IGGCDGAKSGRNYYTEFAENVPKDCVILTLACGKYRFNKLDFGDIGGIPRLLDIGQCNDA
EECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCEECCCCCCCCCCCCCHHEECCCCCCH
YSAIQIAVALAGAFNCGVNELPLSFILSWYEQKAVAILLTLLHLGVKNIKLGPSLPAFIT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEC
PNVLNFLVENFNIGPIGTAEGDLKQILG
HHHHHHHHHCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MKNLIKNLFGFSTSTNNNEKKGETMENMFCFQCEQAANGGCSKVGVCGKQPDVAALQDLL
CHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
VYTMKGIAFWADKARGKGVKNAEIDHFMIDGLFTTVTNVDFSAEEVAKLVRKGATLLEKA
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
QTLFEQANGGAYAGAVPEAAKGFTATSTAELVALGAAHGVKSDAIDADVKSVQEIIVYGM
HHHHHHCCCCEEECCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
KGYAAYAHHALVIGRENDEIYAFTHKALAATLDLTLGLMDFVGLAMECGRINLVTMELLD
CHHHHHHCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH
KANTDSFGHPVPTPVQLGTKAGKAILVSGHDLRMLEELLKQTEGKGINIYTHGEMLPAHG
CCCCCCCCCCCCCCHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCCEECCCC
YPGLKKYAHLAGNFGGAWQDQAKEFVNFPGAIIFNTNCIQRPAESYKDRLFTWGLVQWPD
CCHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCHHHHCHHHHHHHHHEECCCEECCC
VKNINGMDFAPVIEKALALPGFEENLGQEILTGFGHNAVLGVADKVIAAVKAGDIRHFFL
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEE
IGGCDGAKSGRNYYTEFAENVPKDCVILTLACGKYRFNKLDFGDIGGIPRLLDIGQCNDA
EECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCEECCCCCCCCCCCCCHHEECCCCCCH
YSAIQIAVALAGAFNCGVNELPLSFILSWYEQKAVAILLTLLHLGVKNIKLGPSLPAFIT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEC
PNVLNFLVENFNIGPIGTAEGDLKQILG
HHHHHHHHHCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA