| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is ppk [H]
Identifier: 197117421
GI number: 197117421
Start: 1200567
End: 1203035
Strand: Direct
Name: ppk [H]
Synonym: Gbem_1031
Alternate gene names: 197117421
Gene position: 1200567-1203035 (Clockwise)
Preceding gene: 197117420
Following gene: 197117422
Centisome position: 26.01
GC content: 61.93
Gene sequence:
>2469_bases ATGGAGACCAAAAGCGTCGTTCCCAAAGATGAGCCCGAAGTGGAACTCCTGCAGTTAGCAGAGGAAGCTGAAAAGACTCC TGTCAGTACTCTCGAATTTCCTGCCATTACGCCCCCCGCCAGTGAACAGGATGCCCCCGCAGAAGCGATAGTGGACGCCC TGACTGTTGCATCGGCCGAAACCCCTGCCAAAAATAGCGGCACCAAGAAGAAAGCTCCCAAGGCAAAGGCCCCGAAATCG GATTCGGCCGGCGGGCGGGGCGGCAAGGCGAAGAGTGCCAAGTCCAAGGCGAACAAGCAAAAAACGGCCAAGGCGAAGGG CGCGGCAAAAGGAGCCGTCGCTCCAAAGCCGAGCGAGCCCGAAGCCGAGTTCGACTTGGGCGACAGCCAATGGTATCTGA ACCGCGAGCTGACCTGGCTTGAATTCAACCGGCGCGTGCTGCACGAGGCGATCGACGAGCGGACGCCGCTTTTAGAACGG CTGAAGTTCGTCGCCATCGTGAGCGGCAACCTGGACGAGTTTTACATGAAAAGGATCGGCGGCCTTAAGCAGCAGATCGG GGCTGGGCTGCACGAGCTCACCCTGGACGGCCGCACCCCTCTGCAGCAGGTGACCGAGTGCCGCAGCATGATCCGCGAGA TCGAGGCGCAGAAAAGGGACGCCTTCAAGGCGGCGCTGCAGCTCCTGGAGACGAAAGGGATCGTCATCGAGAGCTACGCC ACCCTCTCCGTCAAGGAAAAGAAGCAACTGCGCGAGCATTACTACGCCAACATCTATCCACTTTTGACCCCTCAATCCAT CGACCCGGCGCACCCGTTTCCCTTCATCTCCAACCTCTCGCTCAACCTGCTGGTCGCCCTGCGTTACCCAAAGGCGCGCG AGACGTCCCTGGCGCGGGTCAAGGTCCCGGTAGGCCTCGGGACGCCGCGCTTCATCAGGGTAGGAAAGGGGGATCACTTC ATCCCGCTCGAACAGGTGATGATGAACAACCTGGACATGCTCTTTCCCGGCATGCTCATCGTCTCCTGCGAGATCTTCCG GGTCACCCGCAACGCCAACACCGAGAAGGACGAGGAAGAGGCGGACGACCTGATGGCGATGATCGAGTCGGAGCTGAAGG AGCGGAAGTTCGCGCCGATCGTGCGGCTGGAGGTGGGGGCCGGGATGGAGCCGCTGCACCGCGGACGGCTGGCGGCGGAG CTGGAGCTGGACGAGGCAAACGACGTCTTCGAGGTGCAGGGGATGCTCGCGCTCAGGGACCTGTTCGAGATCTCGAAGCT GGACTACCCGCGCCTGCACGACCCGCCGCATCATCCCATCGACCACCCGCAGCTTCTGGCCTCGCGCAACATCTTCCACA CCATCCGGGACGCGGGGGCGATCCTCTTGCAGCACCCCTACGTCTCCTTTTCCACCTCGGTAGAGAGGTTCCTGCGCGAG GCGGGGACCGACCCCAAGGTGCGCGCCATCAAGATGACCCTGTATCGCACCTCCAGCCAAAGCCGGATCATCGACGCCCT GATCCTGGCGGCACAAAACGGCAAGCAGGTGGCCGTGGTAGTGGAGCTGAAGGCGCGCTTCGACGAGGCGGCCAACATCC GCTTTGCCGAGCTGATGGAGGAGGCGGGGATCCACGTGACCTACGGAGTGGTGGGGCTTAAGACCCACTGCAAGGTGATC CTCGTGGTGCGGCAGGACTACCAGGGGCTGCGCCGCTACGTCCACGTCGGCACCGGCAACTACCACACCGAGACCGCGCG CATCTACAGCGACATAGGGCTCATCACCTGCGATGAGGTGATCGCCCAGGACGTCACCGAGCTGTTCAACTACTTAACCA CCGGGTTCTCGGCCAAGCGCAACTACCGCGCCGTCATGCCCGCTCCCAAACTGCTCAAGAAGGCGCTCTTGGCGCGGATT GAACGGGAGGTGGCGCTGCACCTGGAGAGCGGCGGCGGGGTGATCCAGTTCAAGATGAACGCGCTGGAGGACGGCGACAT AGTGAAGGCCCTCTACCGGGCCTCCATGGCGGGGGTGAAGGTCGATCTCTACGTGCGGGATACCTGCAGGCTGAGACCCG GCATCCCCAGGCTTTCGGATCATATCCGCGTGGTCAGCATCGTCGGGCGCTTCCTGGAACACGCCAGGCTTTACTATTTC CGCAACGGTGGAGCGGAGGAATATTTCATCGCCTCGGCGGACGCCATGAAAAGGAACCTGGAGGCGAGGGTCGAGATCCT TTGCCCGGTCACGGCTCCCGAACTTATCGCCGAACTGCGTGCGGTCTTCGACTGTTACGACGCCGACCACCGCTCCGCCT GGGACATGCAGCCCGACGGCAGCTATCTGCAGCGCAACCCCGCAGAAGAGGAAAGCGGCGAGGGGACGCACCAGATGCTG ATAACGCAGGCACAGAAAAGGTTGAAGGAATCGCTGAAGCAGAAGAAAAAGTCTTTGCAGCAACGGTAA
Upstream 100 bases:
>100_bases TTATTCGAGGAGCCGCAGCCATTGTATCAGCCTGAGAGGTTGTCATTGCTTGATAGTATGTAAGAATATTTCATTCCTAG AACCCCGGAGATCAAAGGCA
Downstream 100 bases:
>100_bases ACCGCTAGCCACGGAGAGCACCTCACGGCGGCTCATGGGTGACAGCGGAAGCGAAAAGAGCTAGCATGTTGTGGTGCTCA ACACAAAACAGGGGAGACTC
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 822; Mature: 822
Protein sequence:
>822_residues METKSVVPKDEPEVELLQLAEEAEKTPVSTLEFPAITPPASEQDAPAEAIVDALTVASAETPAKNSGTKKKAPKAKAPKS DSAGGRGGKAKSAKSKANKQKTAKAKGAAKGAVAPKPSEPEAEFDLGDSQWYLNRELTWLEFNRRVLHEAIDERTPLLER LKFVAIVSGNLDEFYMKRIGGLKQQIGAGLHELTLDGRTPLQQVTECRSMIREIEAQKRDAFKAALQLLETKGIVIESYA TLSVKEKKQLREHYYANIYPLLTPQSIDPAHPFPFISNLSLNLLVALRYPKARETSLARVKVPVGLGTPRFIRVGKGDHF IPLEQVMMNNLDMLFPGMLIVSCEIFRVTRNANTEKDEEEADDLMAMIESELKERKFAPIVRLEVGAGMEPLHRGRLAAE LELDEANDVFEVQGMLALRDLFEISKLDYPRLHDPPHHPIDHPQLLASRNIFHTIRDAGAILLQHPYVSFSTSVERFLRE AGTDPKVRAIKMTLYRTSSQSRIIDALILAAQNGKQVAVVVELKARFDEAANIRFAELMEEAGIHVTYGVVGLKTHCKVI LVVRQDYQGLRRYVHVGTGNYHTETARIYSDIGLITCDEVIAQDVTELFNYLTTGFSAKRNYRAVMPAPKLLKKALLARI EREVALHLESGGGVIQFKMNALEDGDIVKALYRASMAGVKVDLYVRDTCRLRPGIPRLSDHIRVVSIVGRFLEHARLYYF RNGGAEEYFIASADAMKRNLEARVEILCPVTAPELIAELRAVFDCYDADHRSAWDMQPDGSYLQRNPAEEESGEGTHQML ITQAQKRLKESLKQKKKSLQQR
Sequences:
>Translated_822_residues METKSVVPKDEPEVELLQLAEEAEKTPVSTLEFPAITPPASEQDAPAEAIVDALTVASAETPAKNSGTKKKAPKAKAPKS DSAGGRGGKAKSAKSKANKQKTAKAKGAAKGAVAPKPSEPEAEFDLGDSQWYLNRELTWLEFNRRVLHEAIDERTPLLER LKFVAIVSGNLDEFYMKRIGGLKQQIGAGLHELTLDGRTPLQQVTECRSMIREIEAQKRDAFKAALQLLETKGIVIESYA TLSVKEKKQLREHYYANIYPLLTPQSIDPAHPFPFISNLSLNLLVALRYPKARETSLARVKVPVGLGTPRFIRVGKGDHF IPLEQVMMNNLDMLFPGMLIVSCEIFRVTRNANTEKDEEEADDLMAMIESELKERKFAPIVRLEVGAGMEPLHRGRLAAE LELDEANDVFEVQGMLALRDLFEISKLDYPRLHDPPHHPIDHPQLLASRNIFHTIRDAGAILLQHPYVSFSTSVERFLRE AGTDPKVRAIKMTLYRTSSQSRIIDALILAAQNGKQVAVVVELKARFDEAANIRFAELMEEAGIHVTYGVVGLKTHCKVI LVVRQDYQGLRRYVHVGTGNYHTETARIYSDIGLITCDEVIAQDVTELFNYLTTGFSAKRNYRAVMPAPKLLKKALLARI EREVALHLESGGGVIQFKMNALEDGDIVKALYRASMAGVKVDLYVRDTCRLRPGIPRLSDHIRVVSIVGRFLEHARLYYF RNGGAEEYFIASADAMKRNLEARVEILCPVTAPELIAELRAVFDCYDADHRSAWDMQPDGSYLQRNPAEEESGEGTHQML ITQAQKRLKESLKQKKKSLQQR >Mature_822_residues METKSVVPKDEPEVELLQLAEEAEKTPVSTLEFPAITPPASEQDAPAEAIVDALTVASAETPAKNSGTKKKAPKAKAPKS DSAGGRGGKAKSAKSKANKQKTAKAKGAAKGAVAPKPSEPEAEFDLGDSQWYLNRELTWLEFNRRVLHEAIDERTPLLER LKFVAIVSGNLDEFYMKRIGGLKQQIGAGLHELTLDGRTPLQQVTECRSMIREIEAQKRDAFKAALQLLETKGIVIESYA TLSVKEKKQLREHYYANIYPLLTPQSIDPAHPFPFISNLSLNLLVALRYPKARETSLARVKVPVGLGTPRFIRVGKGDHF IPLEQVMMNNLDMLFPGMLIVSCEIFRVTRNANTEKDEEEADDLMAMIESELKERKFAPIVRLEVGAGMEPLHRGRLAAE LELDEANDVFEVQGMLALRDLFEISKLDYPRLHDPPHHPIDHPQLLASRNIFHTIRDAGAILLQHPYVSFSTSVERFLRE AGTDPKVRAIKMTLYRTSSQSRIIDALILAAQNGKQVAVVVELKARFDEAANIRFAELMEEAGIHVTYGVVGLKTHCKVI LVVRQDYQGLRRYVHVGTGNYHTETARIYSDIGLITCDEVIAQDVTELFNYLTTGFSAKRNYRAVMPAPKLLKKALLARI EREVALHLESGGGVIQFKMNALEDGDIVKALYRASMAGVKVDLYVRDTCRLRPGIPRLSDHIRVVSIVGRFLEHARLYYF RNGGAEEYFIASADAMKRNLEARVEILCPVTAPELIAELRAVFDCYDADHRSAWDMQPDGSYLQRNPAEEESGEGTHQML ITQAQKRLKESLKQKKKSLQQR
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=664, Percent_Identity=32.6807228915663, Blast_Score=327, Evalue=2e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 91956; Mature: 91956
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKSVVPKDEPEVELLQLAEEAEKTPVSTLEFPAITPPASEQDAPAEAIVDALTVASAE CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCC TPAKNSGTKKKAPKAKAPKSDSAGGRGGKAKSAKSKANKQKTAKAKGAAKGAVAPKPSEP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC EAEFDLGDSQWYLNRELTWLEFNRRVLHEAIDERTPLLERLKFVAIVSGNLDEFYMKRIG CCCCCCCCCCEEECCCEEHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCHHHHHHHHHC GLKQQIGAGLHELTLDGRTPLQQVTECRSMIREIEAQKRDAFKAALQLLETKGIVIESYA CHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE TLSVKEKKQLREHYYANIYPLLTPQSIDPAHPFPFISNLSLNLLVALRYPKARETSLARV EECHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEE KVPVGLGTPRFIRVGKGDHFIPLEQVMMNNLDMLFPGMLIVSCEIFRVTRNANTEKDEEE EEEECCCCCCEEEECCCCCCCCHHHHHHCCCHHHHCCHHHHHEEEEEEECCCCCCCCHHH ADDLMAMIESELKERKFAPIVRLEVGAGMEPLHRGRLAAELELDEANDVFEVQGMLALRD HHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHH LFEISKLDYPRLHDPPHHPIDHPQLLASRNIFHTIRDAGAILLQHPYVSFSTSVERFLRE HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHH AGTDPKVRAIKMTLYRTSSQSRIIDALILAAQNGKQVAVVVELKARFDEAANIRFAELME CCCCCCEEEEEEEEEECCCHHHHHHHHHHEECCCCEEEEEEEEEHHCCHHCCCHHHHHHH EAGIHVTYGVVGLKTHCKVILVVRQDYQGLRRYVHVGTGNYHTETARIYSDIGLITCDEV HCCCEEEEEEEEECCCCEEEEEEHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCEEHHHH IAQDVTELFNYLTTGFSAKRNYRAVMPAPKLLKKALLARIEREVALHLESGGGVIQFKMN HHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEC ALEDGDIVKALYRASMAGVKVDLYVRDTCRLRPGIPRLSDHIRVVSIVGRFLEHARLYYF CCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEE RNGGAEEYFIASADAMKRNLEARVEILCPVTAPELIAELRAVFDCYDADHRSAWDMQPDG ECCCCCEEEEECHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC SYLQRNPAEEESGEGTHQMLITQAQKRLKESLKQKKKSLQQR CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure METKSVVPKDEPEVELLQLAEEAEKTPVSTLEFPAITPPASEQDAPAEAIVDALTVASAE CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCC TPAKNSGTKKKAPKAKAPKSDSAGGRGGKAKSAKSKANKQKTAKAKGAAKGAVAPKPSEP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC EAEFDLGDSQWYLNRELTWLEFNRRVLHEAIDERTPLLERLKFVAIVSGNLDEFYMKRIG CCCCCCCCCCEEECCCEEHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCHHHHHHHHHC GLKQQIGAGLHELTLDGRTPLQQVTECRSMIREIEAQKRDAFKAALQLLETKGIVIESYA CHHHHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE TLSVKEKKQLREHYYANIYPLLTPQSIDPAHPFPFISNLSLNLLVALRYPKARETSLARV EECHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEE KVPVGLGTPRFIRVGKGDHFIPLEQVMMNNLDMLFPGMLIVSCEIFRVTRNANTEKDEEE EEEECCCCCCEEEECCCCCCCCHHHHHHCCCHHHHCCHHHHHEEEEEEECCCCCCCCHHH ADDLMAMIESELKERKFAPIVRLEVGAGMEPLHRGRLAAELELDEANDVFEVQGMLALRD HHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHH LFEISKLDYPRLHDPPHHPIDHPQLLASRNIFHTIRDAGAILLQHPYVSFSTSVERFLRE HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHH AGTDPKVRAIKMTLYRTSSQSRIIDALILAAQNGKQVAVVVELKARFDEAANIRFAELME CCCCCCEEEEEEEEEECCCHHHHHHHHHHEECCCCEEEEEEEEEHHCCHHCCCHHHHHHH EAGIHVTYGVVGLKTHCKVILVVRQDYQGLRRYVHVGTGNYHTETARIYSDIGLITCDEV HCCCEEEEEEEEECCCCEEEEEEHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCEEHHHH IAQDVTELFNYLTTGFSAKRNYRAVMPAPKLLKKALLARIEREVALHLESGGGVIQFKMN HHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEC ALEDGDIVKALYRASMAGVKVDLYVRDTCRLRPGIPRLSDHIRVVSIVGRFLEHARLYYF CCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEE RNGGAEEYFIASADAMKRNLEARVEILCPVTAPELIAELRAVFDCYDADHRSAWDMQPDG ECCCCCEEEEECHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC SYLQRNPAEEESGEGTHQMLITQAQKRLKESLKQKKKSLQQR CHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]