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The map label for this gene is 197117414

Identifier: 197117414

GI number: 197117414

Start: 1193208

End: 1194611

Strand: Direct

Name: 197117414

Synonym: Gbem_1024

Alternate gene names: NA

Gene position: 1193208-1194611 (Clockwise)

Preceding gene: 197117411

Following gene: 197117415

Centisome position: 25.85

GC content: 65.31

Gene sequence:

>1404_bases
GTGCAACGCGTACTGATGATCAGCACCAACAGCGAAACCGTTCCCCAGCCGACGGTCCCAATCGGGGCAGCCTGGGTGGC
CGAGGCGTTGCGCCTGTCGGGGTTCGAGGTGCAATTCCTCGACCTCTGTTTCCAGAAGAAGCCCCTTGCCGCTGTCGAGG
ACTCCCTCCGCGCCTTTCGCCCCGACGGGATCGGGCTCTCCATCCGCAACCTCGACAACTGCGACTTCCTCTCTCCCCAG
TCGTACCTTCCCGCAGTCAAGGAGATGGTCGATTTCATCAAGACCGTCAGCCGCGCGAGGACGCTGGTGGGGGGGGCTGG
GGTAAGCCTGATGCCGCTGCAGGTGCTGGAGTACCTGGGACTGGATCATGCCGTGGTGGGGGAGGGGGAGCACGCAGCGC
CCGCCTTTTTTCGTGCCGCGAGCGTCGCCGACGCCTGCCGGGTACCGGGGGTGGTATCCACGCATGGGAGCATGCCGAAG
CCGCCGCAGCTGTCGAACGAGTTCGTGCCGCCGCGGCCCCACAGCTGGGTGGACACGCGGCGTTACCTGGGGATGGAGCC
GGTGCTCCCGGTCCAGGGGAAAAGAGGGTGCGCCAACCGCTGCCTCTACTGCACCTATCACAACGTGGAGGGAGAGGCCT
GGCGCATCAGGGAACCCGCGGCCGTGGTCGAGGAGATGTTAAGCGCGATGCGGCACACCGGCGCCAGGGAATTCGAGTTC
GTCGACAGCGTCTTCAACGAGCCGCCGGGGTACCTCGAACTACTGCTGGAAGAGATCCTCAGGAGGGGGGTGCGGGCGCG
CCTCAGCGTCTCATCGCTATCTCCCAAGGGGCTTACCCGCGACCAGGTGAGGCTCATGGAAAGGGCGGGGATGACCTCGC
TGGTCATCACCCCGGAAAGCGCTGCCGACGCCACGCTCGCTGGCTTGGGAAAAGGGTTTGGCGAGGCGGATGTGCATCGT
GCGGCAGAGATTCTCTCCGGCTCCAGCATCCGCGCCCTCTGGTGCTTTCTCGTGGGCGGCCCCTCGGAGAACGGGGAGAG
CGTGGCTAAGACGGTCCGCTTCGTGAACCGGCTCCCTCGCAAGGAGAGCGCCTACATCACCACCGGGATCAGGATCTACC
CCGGCACCGGCGTGCACCGCCTGGCGCTGGAGGAGGGGATGGTCGAGCCGGAACAGAATCTGCTGCACCCAGCCTTTTAT
TTCACCAGGGAACTGACCCCGCAAAAGACCATGGAGATGCTGCAACGGGGGGTGTCCGATCTCTCCCGGTGCATCTTCCC
TTCGGAGGCCAACGAGAAATCGCTTGGCATGCTGCGCCGGCTAGGGACCCTGCTCCGTTTGCCCACCCCCTTTTGGCGCT
ACGCGGGGTACGCCAAAAGGATTTCCCCCGGCAGCAGGCGGTGA

Upstream 100 bases:

>100_bases
CCCTCCATAAGAAACATTTTACTCCTTGCGTTTTCGAGGATCAACACCTTTGTTAGACCTAACGCTTGCCGCACTTAATG
AGTTGTAAAAGGAGATGGAT

Downstream 100 bases:

>100_bases
CTGTCAGCCGTCGGACCTCCGGCAGAAAAAAATTTGTATGTTACAATCCTGCATGGTTCGCCCGGGATGCCGGACGACAA
AATGACCTCCAGGGGGCCCT

Product: cobalamin-binding radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MQRVLMISTNSETVPQPTVPIGAAWVAEALRLSGFEVQFLDLCFQKKPLAAVEDSLRAFRPDGIGLSIRNLDNCDFLSPQ
SYLPAVKEMVDFIKTVSRARTLVGGAGVSLMPLQVLEYLGLDHAVVGEGEHAAPAFFRAASVADACRVPGVVSTHGSMPK
PPQLSNEFVPPRPHSWVDTRRYLGMEPVLPVQGKRGCANRCLYCTYHNVEGEAWRIREPAAVVEEMLSAMRHTGAREFEF
VDSVFNEPPGYLELLLEEILRRGVRARLSVSSLSPKGLTRDQVRLMERAGMTSLVITPESAADATLAGLGKGFGEADVHR
AAEILSGSSIRALWCFLVGGPSENGESVAKTVRFVNRLPRKESAYITTGIRIYPGTGVHRLALEEGMVEPEQNLLHPAFY
FTRELTPQKTMEMLQRGVSDLSRCIFPSEANEKSLGMLRRLGTLLRLPTPFWRYAGYAKRISPGSRR

Sequences:

>Translated_467_residues
MQRVLMISTNSETVPQPTVPIGAAWVAEALRLSGFEVQFLDLCFQKKPLAAVEDSLRAFRPDGIGLSIRNLDNCDFLSPQ
SYLPAVKEMVDFIKTVSRARTLVGGAGVSLMPLQVLEYLGLDHAVVGEGEHAAPAFFRAASVADACRVPGVVSTHGSMPK
PPQLSNEFVPPRPHSWVDTRRYLGMEPVLPVQGKRGCANRCLYCTYHNVEGEAWRIREPAAVVEEMLSAMRHTGAREFEF
VDSVFNEPPGYLELLLEEILRRGVRARLSVSSLSPKGLTRDQVRLMERAGMTSLVITPESAADATLAGLGKGFGEADVHR
AAEILSGSSIRALWCFLVGGPSENGESVAKTVRFVNRLPRKESAYITTGIRIYPGTGVHRLALEEGMVEPEQNLLHPAFY
FTRELTPQKTMEMLQRGVSDLSRCIFPSEANEKSLGMLRRLGTLLRLPTPFWRYAGYAKRISPGSRR
>Mature_467_residues
MQRVLMISTNSETVPQPTVPIGAAWVAEALRLSGFEVQFLDLCFQKKPLAAVEDSLRAFRPDGIGLSIRNLDNCDFLSPQ
SYLPAVKEMVDFIKTVSRARTLVGGAGVSLMPLQVLEYLGLDHAVVGEGEHAAPAFFRAASVADACRVPGVVSTHGSMPK
PPQLSNEFVPPRPHSWVDTRRYLGMEPVLPVQGKRGCANRCLYCTYHNVEGEAWRIREPAAVVEEMLSAMRHTGAREFEF
VDSVFNEPPGYLELLLEEILRRGVRARLSVSSLSPKGLTRDQVRLMERAGMTSLVITPESAADATLAGLGKGFGEADVHR
AAEILSGSSIRALWCFLVGGPSENGESVAKTVRFVNRLPRKESAYITTGIRIYPGTGVHRLALEEGMVEPEQNLLHPAFY
FTRELTPQKTMEMLQRGVSDLSRCIFPSEANEKSLGMLRRLGTLLRLPTPFWRYAGYAKRISPGSRR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 51522; Mature: 51522

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRVLMISTNSETVPQPTVPIGAAWVAEALRLSGFEVQFLDLCFQKKPLAAVEDSLRAFR
CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCC
PDGIGLSIRNLDNCDFLSPQSYLPAVKEMVDFIKTVSRARTLVGGAGVSLMPLQVLEYLG
CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
LDHAVVGEGEHAAPAFFRAASVADACRVPGVVSTHGSMPKPPQLSNEFVPPRPHSWVDTR
CCCEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
RYLGMEPVLPVQGKRGCANRCLYCTYHNVEGEAWRIREPAAVVEEMLSAMRHTGAREFEF
HHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHH
VDSVFNEPPGYLELLLEEILRRGVRARLSVSSLSPKGLTRDQVRLMERAGMTSLVITPES
HHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCC
AADATLAGLGKGFGEADVHRAAEILSGSSIRALWCFLVGGPSENGESVAKTVRFVNRLPR
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCC
KESAYITTGIRIYPGTGVHRLALEEGMVEPEQNLLHPAFYFTRELTPQKTMEMLQRGVSD
CCCCEEEECEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LSRCIFPSEANEKSLGMLRRLGTLLRLPTPFWRYAGYAKRISPGSRR
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCCCC
>Mature Secondary Structure
MQRVLMISTNSETVPQPTVPIGAAWVAEALRLSGFEVQFLDLCFQKKPLAAVEDSLRAFR
CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCC
PDGIGLSIRNLDNCDFLSPQSYLPAVKEMVDFIKTVSRARTLVGGAGVSLMPLQVLEYLG
CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
LDHAVVGEGEHAAPAFFRAASVADACRVPGVVSTHGSMPKPPQLSNEFVPPRPHSWVDTR
CCCEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
RYLGMEPVLPVQGKRGCANRCLYCTYHNVEGEAWRIREPAAVVEEMLSAMRHTGAREFEF
HHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHH
VDSVFNEPPGYLELLLEEILRRGVRARLSVSSLSPKGLTRDQVRLMERAGMTSLVITPES
HHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCC
AADATLAGLGKGFGEADVHRAAEILSGSSIRALWCFLVGGPSENGESVAKTVRFVNRLPR
HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCC
KESAYITTGIRIYPGTGVHRLALEEGMVEPEQNLLHPAFYFTRELTPQKTMEMLQRGVSD
CCCCEEEECEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LSRCIFPSEANEKSLGMLRRLGTLLRLPTPFWRYAGYAKRISPGSRR
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]