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The map label for this gene is yecS [H]

Identifier: 197117374

GI number: 197117374

Start: 1142221

End: 1143240

Strand: Direct

Name: yecS [H]

Synonym: Gbem_0984

Alternate gene names: 197117374

Gene position: 1142221-1143240 (Clockwise)

Preceding gene: 197117373

Following gene: 197117375

Centisome position: 24.75

GC content: 58.43

Gene sequence:

>1020_bases
ATGAGACTTTTCCCCGGCAGGATCTCGAAGAAAACGATCCTGCTTTTTTCATGCTTGTTCCTCCTCCTGGTCCAGACCTG
CTACGCCACGGACTACGACCAGATATTCAGCGACGCCAACGACGCGATGGGAAGCGGAGATCTCCCTGCCGCCATCGCCA
TCCTGCAGAAGGTCAAGCCGGACCAGGGCGACGACAGCGGCGCCTTCGTCAGGAGCCGGATGCAGATAGCGAGGCTTCAG
TTCGCCCTCAAGGACATGAATGCCGCCAGCGCCAGCGCGAACGAGGTCCTTGCCCTCTACCCCGACAACAGCGAGGCGCT
CAACTTCATCGCATCGGTCAAAAAGGAACAGAAGCCGCGCTACGTAGTCTTCATGGAGGATTGTCTCCGCTTCCTGCCGC
AGCTCTTGAAGGGGGCGGTGATGACCATCACCCTGGTGGTCTGCATCATCGTGATCTCCCCCTTGGGCGGCCTGCTGATA
GCTTTAGGGCGCATCAGCACCTTTAAGCCTGTCTCCGGACTCTGCTGGCTCTTCATCTGGCTCTTCCGAGGCACTCCGCT
TCTGCTGCAGCTCTTCTTCATCTACTACGGCCTTCCGTCTCTGGGCATCACCTTCAAACCCTTCACCGCCGCCATCCTGG
GGCTGGGCCTCAATTACTCCGCTTACCTGGGCGAGATCATCCGCGGCGGCATTCAGAGCATAGAGCACGGGCAGATGGAA
GCCGCCAAGGCGATCGGCATGAGCTACTGGCAGGCGATGCGCCGGGTGGTCATCCCACAGACCTACAAGCGGTTGATGCC
TCCCATAGGCAACGAGTTCATAGCGCTCATCAAGGACACCGCGCTGGTCTCCACCATCGCCATGGTCGAACTGATGCGTT
CCGCCGACCAGATGTTCAACGCCTATTTCAACGTGACGGCGCTGATTCTGGCCGCGTTCATCTACCTCCTCTTCACCACC
ATCTTCACCTTCATATTCGAGAAGATCGAGATCAGGGCCGGCATCTATGAAAACCGCTAA

Upstream 100 bases:

>100_bases
CGAGGACATCACCAACCCGAAGAAGTGGAAATAGACAGAACTATCCCCTCCCCGGGCAACGGGGAGGGGAACCGTTACAG
CCAATAATTCAGGTGTGCCG

Downstream 100 bases:

>100_bases
CCAACCGCTTCTAAGCCTCAAAGGGATCACCAAGCGCTTCGGCGCGCTGACCGCGGTAAACGGCGTCGACCTCGACGTCT
GCCCGGGGGAAATCGTGGTC

Product: ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MRLFPGRISKKTILLFSCLFLLLVQTCYATDYDQIFSDANDAMGSGDLPAAIAILQKVKPDQGDDSGAFVRSRMQIARLQ
FALKDMNAASASANEVLALYPDNSEALNFIASVKKEQKPRYVVFMEDCLRFLPQLLKGAVMTITLVVCIIVISPLGGLLI
ALGRISTFKPVSGLCWLFIWLFRGTPLLLQLFFIYYGLPSLGITFKPFTAAILGLGLNYSAYLGEIIRGGIQSIEHGQME
AAKAIGMSYWQAMRRVVIPQTYKRLMPPIGNEFIALIKDTALVSTIAMVELMRSADQMFNAYFNVTALILAAFIYLLFTT
IFTFIFEKIEIRAGIYENR

Sequences:

>Translated_339_residues
MRLFPGRISKKTILLFSCLFLLLVQTCYATDYDQIFSDANDAMGSGDLPAAIAILQKVKPDQGDDSGAFVRSRMQIARLQ
FALKDMNAASASANEVLALYPDNSEALNFIASVKKEQKPRYVVFMEDCLRFLPQLLKGAVMTITLVVCIIVISPLGGLLI
ALGRISTFKPVSGLCWLFIWLFRGTPLLLQLFFIYYGLPSLGITFKPFTAAILGLGLNYSAYLGEIIRGGIQSIEHGQME
AAKAIGMSYWQAMRRVVIPQTYKRLMPPIGNEFIALIKDTALVSTIAMVELMRSADQMFNAYFNVTALILAAFIYLLFTT
IFTFIFEKIEIRAGIYENR
>Mature_339_residues
MRLFPGRISKKTILLFSCLFLLLVQTCYATDYDQIFSDANDAMGSGDLPAAIAILQKVKPDQGDDSGAFVRSRMQIARLQ
FALKDMNAASASANEVLALYPDNSEALNFIASVKKEQKPRYVVFMEDCLRFLPQLLKGAVMTITLVVCIIVISPLGGLLI
ALGRISTFKPVSGLCWLFIWLFRGTPLLLQLFFIYYGLPSLGITFKPFTAAILGLGLNYSAYLGEIIRGGIQSIEHGQME
AAKAIGMSYWQAMRRVVIPQTYKRLMPPIGNEFIALIKDTALVSTIAMVELMRSADQMFNAYFNVTALILAAFIYLLFTT
IFTFIFEKIEIRAGIYENR

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=200, Percent_Identity=44, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1787030, Length=211, Percent_Identity=36.9668246445498, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1786873, Length=197, Percent_Identity=33.502538071066, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1788645, Length=206, Percent_Identity=33.0097087378641, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787087, Length=235, Percent_Identity=29.3617021276596, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1787086, Length=224, Percent_Identity=32.1428571428571, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1786874, Length=213, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87082239, Length=187, Percent_Identity=35.2941176470588, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788646, Length=222, Percent_Identity=30.6306306306306, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI48994930, Length=178, Percent_Identity=30.8988764044944, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37806; Mature: 37806

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFPGRISKKTILLFSCLFLLLVQTCYATDYDQIFSDANDAMGSGDLPAAIAILQKVKP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHCCCCCCHHHHHHHHHHHCC
DQGDDSGAFVRSRMQIARLQFALKDMNAASASANEVLALYPDNSEALNFIASVKKEQKPR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCC
YVVFMEDCLRFLPQLLKGAVMTITLVVCIIVISPLGGLLIALGRISTFKPVSGLCWLFIW
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LFRGTPLLLQLFFIYYGLPSLGITFKPFTAAILGLGLNYSAYLGEIIRGGIQSIEHGQME
HHCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AAKAIGMSYWQAMRRVVIPQTYKRLMPPIGNEFIALIKDTALVSTIAMVELMRSADQMFN
HHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYFNVTALILAAFIYLLFTTIFTFIFEKIEIRAGIYENR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRLFPGRISKKTILLFSCLFLLLVQTCYATDYDQIFSDANDAMGSGDLPAAIAILQKVKP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHCCCCCCHHHHHHHHHHHCC
DQGDDSGAFVRSRMQIARLQFALKDMNAASASANEVLALYPDNSEALNFIASVKKEQKPR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCC
YVVFMEDCLRFLPQLLKGAVMTITLVVCIIVISPLGGLLIALGRISTFKPVSGLCWLFIW
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LFRGTPLLLQLFFIYYGLPSLGITFKPFTAAILGLGLNYSAYLGEIIRGGIQSIEHGQME
HHCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AAKAIGMSYWQAMRRVVIPQTYKRLMPPIGNEFIALIKDTALVSTIAMVELMRSADQMFN
HHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYFNVTALILAAFIYLLFTTIFTFIFEKIEIRAGIYENR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]