Click here to switch to the map view.

The map label for this gene is yjbQ [C]

Identifier: 197117366

GI number: 197117366

Start: 1133772

End: 1134188

Strand: Reverse

Name: yjbQ [C]

Synonym: Gbem_0976

Alternate gene names: 197117366

Gene position: 1134188-1133772 (Counterclockwise)

Preceding gene: 197117367

Following gene: 197117362

Centisome position: 24.58

GC content: 56.12

Gene sequence:

>417_bases
ATGAAGCATTACCGAAAGGGACTCTGGTTCCAGATAAAGTCCAGGCGCGGCTTCGTAAACATCACCGGTGACATTCAGGA
AGCACTGCGGGAAAGCGGGATAAAGGAAGGGCTCCTGCTCTGCAACGCCATGCACATTACAGCCAGTGTCTTCATAAACG
ACGACGAGTCGGGGCTGCACCAGGATTTAGAGCAATGGTTGGAAGGGCTGGCGCCGGAGAAGCCTCACTCGCGCTACCGG
CACAACAGCGGTGAAGACAACGGCGATGCGCATCTCAAGAGGACAATCATGGGGCGGGAGGTTGTTGTTGCAGTCACAGG
CGGAAAACTCGACCTGGGGCCCTGGGAGCAGGTGTTTTACGGGGAATTCGACGGAATGCGCAGGAAGCGGGTTTTGATCA
AGATCATCGGGGAGTGA

Upstream 100 bases:

>100_bases
GCGGGTAGCACCAGCTATGCTCGACGCGGCATTTGCTGCTGATTCCGCAGATATCGAGGAAAATCCAGGCAACACCATGA
AGGCAACGGTAGGAGATTAG

Downstream 100 bases:

>100_bases
ATCGGTTAGTCGCCGTTAAATTTTGCCACCAGTACGGTTATGTCGTCAGGCTGCGGGTCAGGCTGCCTAGTGAGAGCAAT
GAGCCGATCCACAGTCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKHYRKGLWFQIKSRRGFVNITGDIQEALRESGIKEGLLLCNAMHITASVFINDDESGLHQDLEQWLEGLAPEKPHSRYR
HNSGEDNGDAHLKRTIMGREVVVAVTGGKLDLGPWEQVFYGEFDGMRRKRVLIKIIGE

Sequences:

>Translated_138_residues
MKHYRKGLWFQIKSRRGFVNITGDIQEALRESGIKEGLLLCNAMHITASVFINDDESGLHQDLEQWLEGLAPEKPHSRYR
HNSGEDNGDAHLKRTIMGREVVVAVTGGKLDLGPWEQVFYGEFDGMRRKRVLIKIIGE
>Mature_138_residues
MKHYRKGLWFQIKSRRGFVNITGDIQEALRESGIKEGLLLCNAMHITASVFINDDESGLHQDLEQWLEGLAPEKPHSRYR
HNSGEDNGDAHLKRTIMGREVVVAVTGGKLDLGPWEQVFYGEFDGMRRKRVLIKIIGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15759; Mature: 15759

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHYRKGLWFQIKSRRGFVNITGDIQEALRESGIKEGLLLCNAMHITASVFINDDESGLH
CCCCCCCCEEEEECCCCEEEECHHHHHHHHHCCCHHHHHHHHHEEEEEEEEECCCCCHHH
QDLEQWLEGLAPEKPHSRYRHNSGEDNGDAHLKRTIMGREVVVAVTGGKLDLGPWEQVFY
HHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCEEEEEEECCEECCCCCHHHHH
GEFDGMRRKRVLIKIIGE
CCCCCCCHHEEEEEEECC
>Mature Secondary Structure
MKHYRKGLWFQIKSRRGFVNITGDIQEALRESGIKEGLLLCNAMHITASVFINDDESGLH
CCCCCCCCEEEEECCCCEEEECHHHHHHHHHCCCHHHHHHHHHEEEEEEEEECCCCCHHH
QDLEQWLEGLAPEKPHSRYRHNSGEDNGDAHLKRTIMGREVVVAVTGGKLDLGPWEQVFY
HHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCEEEEEEECCEECCCCCHHHHH
GEFDGMRRKRVLIKIIGE
CCCCCCCHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]