Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117270

Identifier: 197117270

GI number: 197117270

Start: 1034009

End: 1034389

Strand: Direct

Name: 197117270

Synonym: Gbem_0880

Alternate gene names: NA

Gene position: 1034009-1034389 (Clockwise)

Preceding gene: 197117269

Following gene: 197117271

Centisome position: 22.4

GC content: 57.22

Gene sequence:

>381_bases
ATGCTTAAGACCGTTGTGGTCATGCTGATGGCGGTCACCGCCGGAACCATCGGGGACGTGCTGCTCGCCAGCGGCATGAA
AGAGCTGGGCGATCTCTCTACCATGAATTTCAGGGGGATACTGAAAGTCTCCCAGCAGGCGCTGACCACGCCGAAACTGG
TGCTGGGAACCGCGATGCTCGCCATCTTCTTCTTCCTGTGGCTCGCGGTCCTATCCTGGGAAGACTTATCCGTGGCGCTG
CCGATGCAGGCCTTAAACTATATACTGGTGGCCTTTTTGTCTCAGTACTTCCTGCACGAGATAGTGAGCCCCATGCGCTG
GGCCGGAACCATCCTGGTGGCGGTCGGCGTTATAATGATAACCAAGAGTTCCGGCGCCTAA

Upstream 100 bases:

>100_bases
CACGACCAGGAACTGGCCGCTTTGACCAGTCCGAAAACGGCGCAGAAGCTGGCCCAGTTGGGGATACGGCTCAGAAATTA
CCGTGGAGAGGAAAAGACGT

Downstream 100 bases:

>100_bases
TCTTCTTTTAAGACGATCATAGAAGAAGCGCCTGTCGTGGGTAGCTGTGTAACATTAGATAAAACCTAGGCTTTTTCCCT
TGAAAAATAATTCCAAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MLKTVVVMLMAVTAGTIGDVLLASGMKELGDLSTMNFRGILKVSQQALTTPKLVLGTAMLAIFFFLWLAVLSWEDLSVAL
PMQALNYILVAFLSQYFLHEIVSPMRWAGTILVAVGVIMITKSSGA

Sequences:

>Translated_126_residues
MLKTVVVMLMAVTAGTIGDVLLASGMKELGDLSTMNFRGILKVSQQALTTPKLVLGTAMLAIFFFLWLAVLSWEDLSVAL
PMQALNYILVAFLSQYFLHEIVSPMRWAGTILVAVGVIMITKSSGA
>Mature_126_residues
MLKTVVVMLMAVTAGTIGDVLLASGMKELGDLSTMNFRGILKVSQQALTTPKLVLGTAMLAIFFFLWLAVLSWEDLSVAL
PMQALNYILVAFLSQYFLHEIVSPMRWAGTILVAVGVIMITKSSGA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13623; Mature: 13623

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTVVVMLMAVTAGTIGDVLLASGMKELGDLSTMNFRGILKVSQQALTTPKLVLGTAML
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
AIFFFLWLAVLSWEDLSVALPMQALNYILVAFLSQYFLHEIVSPMRWAGTILVAVGVIMI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKSSGA
CCCCCC
>Mature Secondary Structure
MLKTVVVMLMAVTAGTIGDVLLASGMKELGDLSTMNFRGILKVSQQALTTPKLVLGTAML
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
AIFFFLWLAVLSWEDLSVALPMQALNYILVAFLSQYFLHEIVSPMRWAGTILVAVGVIMI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKSSGA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA