Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116717

Identifier: 197116717

GI number: 197116717

Start: 391217

End: 391561

Strand: Direct

Name: 197116717

Synonym: Gbem_0317

Alternate gene names: NA

Gene position: 391217-391561 (Clockwise)

Preceding gene: 197116716

Following gene: 197116719

Centisome position: 8.48

GC content: 51.88

Gene sequence:

>345_bases
ATGTCGGAACTTTTCCCCGATCCTGTAAGAAACCTGCCGCAAGCCGACATTCCATTGAAGGGCATAACGGCCTATCTTTC
CCAAGCGGACAGCCATCAAATCATCTTCATGCAGTTCGATGAGGATGTGGAGTTGCCTGAGCATTCGCACGAAAGCCAGT
GGGGTGTTGTTCTGGAGGGGAGGATCGAGCTGGTGATTGACGGGATAAAGCGGTCATACGTGAAGGGGGATCGCTATTTC
ATTCCTCAGGGCGTCCCCCATTCCGGGAGGATCTACGCCGGCTATGCCGACATGACCTTCTTCGATCAACCTGATCGATA
CAAGATAAGGGAACCGAATGAATAA

Upstream 100 bases:

>100_bases
TCCACCAAGAGGTCAATACTGATCTGAACCCATTTTCTAGAGCCGAGTCAGGTCTGAAAGATTGAACAACTCCCACCCTA
TTGAGCTAAGGACATAGTTT

Downstream 100 bases:

>100_bases
TGGCAACTTTCAAGGAGGGGGTGGCTATGTTCAGGGCGGCTTGCACTGCGACCACCCAAGGAGCGAAGGGATCAGAGATT
CAAACTCTGCCCCCTGGCGC

Product: cupin superfamily barrel domain-containing protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Superfamily Barrel Domain-Containing Protein

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSELFPDPVRNLPQADIPLKGITAYLSQADSHQIIFMQFDEDVELPEHSHESQWGVVLEGRIELVIDGIKRSYVKGDRYF
IPQGVPHSGRIYAGYADMTFFDQPDRYKIREPNE

Sequences:

>Translated_114_residues
MSELFPDPVRNLPQADIPLKGITAYLSQADSHQIIFMQFDEDVELPEHSHESQWGVVLEGRIELVIDGIKRSYVKGDRYF
IPQGVPHSGRIYAGYADMTFFDQPDRYKIREPNE
>Mature_113_residues
SELFPDPVRNLPQADIPLKGITAYLSQADSHQIIFMQFDEDVELPEHSHESQWGVVLEGRIELVIDGIKRSYVKGDRYFI
PQGVPHSGRIYAGYADMTFFDQPDRYKIREPNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13168; Mature: 13037

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELFPDPVRNLPQADIPLKGITAYLSQADSHQIIFMQFDEDVELPEHSHESQWGVVLEG
CCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECC
RIELVIDGIKRSYVKGDRYFIPQGVPHSGRIYAGYADMTFFDQPDRYKIREPNE
EEEEEEECHHHHHCCCCEEECCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SELFPDPVRNLPQADIPLKGITAYLSQADSHQIIFMQFDEDVELPEHSHESQWGVVLEG
CCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEECC
RIELVIDGIKRSYVKGDRYFIPQGVPHSGRIYAGYADMTFFDQPDRYKIREPNE
EEEEEEECHHHHHCCCCEEECCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA