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The map label for this gene is bphB [H]

Identifier: 197116714

GI number: 197116714

Start: 387500

End: 389251

Strand: Direct

Name: bphB [H]

Synonym: Gbem_0314

Alternate gene names: 197116714

Gene position: 387500-389251 (Clockwise)

Preceding gene: 197116711

Following gene: 197116716

Centisome position: 8.4

GC content: 51.31

Gene sequence:

>1752_bases
ATGACCACAGAAGAGTTGTTACAAGACCTCAAGATGAGAGGCGAACTTGACGAGCGCCACCTTTTGGCGTCGATCCGATT
GCTGCACCTACTCGCCTCGGGAAAATCCTCCCAAGAGGTCATGTCGACGTTGTTACCCTTCTTTCAGGAACTTTCTGGAT
GTGAAGCGGTCGCTGTACGGCTACGCGAAGAAGAGGATTACCCCTATTTCCAAACGGTGGGGTTCCCATCGGAGTTCGTG
AACGCTGAGAACTATCTGTGCGCGAAAGACTTGGCCGGCCAGATAAAAAGGGATGCCATCGGCCATCCAGTCCTGGAATG
CATGTGCGGTAACATCCTGTGTGGACGGTTTGATGCCAATAAATCGTTCTTTACCCCAAATGGCAGTTTCTGGACAAACA
GTACTAGCGAGTTGCTCGAAAGTACTGCCGAAGAGGACAGGCAGTCAGCAACCCGCAACAGGTGCAGCGCCGATGGATAC
GAATCGGTAGCCCTGGTTCCCCTGCACCATAATGAAGACATCATTGGACTAATACAGTTTAATGACCGACGCAAAGACCG
ATTCTCCAAAGGGTTTATTGCACTTGTAGAGTTGTTGGCAGACAGTGTGACCGTTGCGGTACTTCGGCGGTGGGAGGAAG
AGAGCCTCAGGAAGCGTGAAGAGTATTACCGCGCTATGGTGACAGCGTTCGACGGCCTCATATACATTTGCTCGGCCAAT
TACCGGATCGAGTTTCTCAATGAAGCTATGAAGCGGCGTATTGGCCACGACGCCATTGGCGAATTGTGTTATGAAGCTCT
GCATGGGCTTGATGCTATCTGCCCGTGGTGTAAAAATGATCGTATTTTCGCAGGTGAAAGCCATCGTTGGGTGGTCCAGA
GCCCAAAAGATAACCGTTGGTACGAAGTGTCTAATACCCCTATAAGGAAAAACAATAAGATCGTTTCCAAACAGGCCATG
ATTATGGACGTAACAGACCGGCAACAGTTGCACGAGGAGCTTTTGCAGAAACAACAAGATTTGATATTGGCAAATGATCT
ATTAGAAAGCCGGGTTGCCGAGAGAACTTCCAATTTGGAGGCAGCAATGAGGGAACAAGAGTCATTCAGTTACTCGGTTT
CCCATGACCTGCGCGCCCCCCTGCGCCACATTAACAGCTTCAGCGCCATTGTCATGGAGGAATTCTCGAATGAACTGCCT
GCCCCTGTGAAAGACTACCTGGTGCGGATTCGCTCAGCGTCAAACAGGATGGGAGGATTGATCGACCACCTGCTTGAACT
GTCCCGGGTAGGCAGGGCGGCGCTGAAACTGGAACCGGTGGATTTGAGCATGATGGCCGCGTCCATTTTGACCGCTCTCC
AGGAGACGGAGTTGAAGCGGACCGTGAAAATCTTTGTGGAAGAGGATGTGCGGGTACTGGGGGACCGGACGCTGTTGCAA
CAGTTGCTGGAGAATCTGCTTGGAAATGCCTGGAAGTACACCTCCAAAACCGTAACAGCGCATATCGAATTCGGCAGTTC
AAAGCGAGGCGACAGCACGATCTTTTATGTCAAAGATAACGGCGCAGGGTTCGACATGCAGTACAAGGACAACCTGTTCA
TTGCCTTCCAGCGTTTGCATACTGCGGAGTTCGAGGGCGAAGGGATCGGGCTTACGACTGCACAGCGTATAATCCATCGC
CACAGTGGGGACATCTGGGCTGAAGGAGAAGTAGGAAAGGGGGCGACTTTCTACTTCACTTTGCCGAATTAG

Upstream 100 bases:

>100_bases
TGATAGTGTGATTGTCCCGTGACCGCACTCTCAACCTGAGGTCGAACCGGTGGGAAGTGTTTGTTAGCATCTAATGCTGG
AGACAAGGCGACCACAGAAA

Downstream 100 bases:

>100_bases
CCCACATCTTCCGAGGCAATCCCACACCACCCTCGCACTCCCCAACTGAAGCGGGCCGTTTACGGGGCGTTAACCAGGAG
AGCCCTTCAACCCATTAGCT

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 582

Protein sequence:

>583_residues
MTTEELLQDLKMRGELDERHLLASIRLLHLLASGKSSQEVMSTLLPFFQELSGCEAVAVRLREEEDYPYFQTVGFPSEFV
NAENYLCAKDLAGQIKRDAIGHPVLECMCGNILCGRFDANKSFFTPNGSFWTNSTSELLESTAEEDRQSATRNRCSADGY
ESVALVPLHHNEDIIGLIQFNDRRKDRFSKGFIALVELLADSVTVAVLRRWEEESLRKREEYYRAMVTAFDGLIYICSAN
YRIEFLNEAMKRRIGHDAIGELCYEALHGLDAICPWCKNDRIFAGESHRWVVQSPKDNRWYEVSNTPIRKNNKIVSKQAM
IMDVTDRQQLHEELLQKQQDLILANDLLESRVAERTSNLEAAMREQESFSYSVSHDLRAPLRHINSFSAIVMEEFSNELP
APVKDYLVRIRSASNRMGGLIDHLLELSRVGRAALKLEPVDLSMMAASILTALQETELKRTVKIFVEEDVRVLGDRTLLQ
QLLENLLGNAWKYTSKTVTAHIEFGSSKRGDSTIFYVKDNGAGFDMQYKDNLFIAFQRLHTAEFEGEGIGLTTAQRIIHR
HSGDIWAEGEVGKGATFYFTLPN

Sequences:

>Translated_583_residues
MTTEELLQDLKMRGELDERHLLASIRLLHLLASGKSSQEVMSTLLPFFQELSGCEAVAVRLREEEDYPYFQTVGFPSEFV
NAENYLCAKDLAGQIKRDAIGHPVLECMCGNILCGRFDANKSFFTPNGSFWTNSTSELLESTAEEDRQSATRNRCSADGY
ESVALVPLHHNEDIIGLIQFNDRRKDRFSKGFIALVELLADSVTVAVLRRWEEESLRKREEYYRAMVTAFDGLIYICSAN
YRIEFLNEAMKRRIGHDAIGELCYEALHGLDAICPWCKNDRIFAGESHRWVVQSPKDNRWYEVSNTPIRKNNKIVSKQAM
IMDVTDRQQLHEELLQKQQDLILANDLLESRVAERTSNLEAAMREQESFSYSVSHDLRAPLRHINSFSAIVMEEFSNELP
APVKDYLVRIRSASNRMGGLIDHLLELSRVGRAALKLEPVDLSMMAASILTALQETELKRTVKIFVEEDVRVLGDRTLLQ
QLLENLLGNAWKYTSKTVTAHIEFGSSKRGDSTIFYVKDNGAGFDMQYKDNLFIAFQRLHTAEFEGEGIGLTTAQRIIHR
HSGDIWAEGEVGKGATFYFTLPN
>Mature_582_residues
TTEELLQDLKMRGELDERHLLASIRLLHLLASGKSSQEVMSTLLPFFQELSGCEAVAVRLREEEDYPYFQTVGFPSEFVN
AENYLCAKDLAGQIKRDAIGHPVLECMCGNILCGRFDANKSFFTPNGSFWTNSTSELLESTAEEDRQSATRNRCSADGYE
SVALVPLHHNEDIIGLIQFNDRRKDRFSKGFIALVELLADSVTVAVLRRWEEESLRKREEYYRAMVTAFDGLIYICSANY
RIEFLNEAMKRRIGHDAIGELCYEALHGLDAICPWCKNDRIFAGESHRWVVQSPKDNRWYEVSNTPIRKNNKIVSKQAMI
MDVTDRQQLHEELLQKQQDLILANDLLESRVAERTSNLEAAMREQESFSYSVSHDLRAPLRHINSFSAIVMEEFSNELPA
PVKDYLVRIRSASNRMGGLIDHLLELSRVGRAALKLEPVDLSMMAASILTALQETELKRTVKIFVEEDVRVLGDRTLLQQ
LLENLLGNAWKYTSKTVTAHIEFGSSKRGDSTIFYVKDNGAGFDMQYKDNLFIAFQRLHTAEFEGEGIGLTTAQRIIHRH
SGDIWAEGEVGKGATFYFTLPN

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=234, Percent_Identity=30.3418803418803, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI145693157, Length=246, Percent_Identity=28.8617886178862, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1789149, Length=234, Percent_Identity=27.7777777777778, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1788549, Length=298, Percent_Identity=27.1812080536913, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1786600, Length=245, Percent_Identity=29.3877551020408, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1786912, Length=326, Percent_Identity=26.9938650306748, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790346, Length=259, Percent_Identity=25.8687258687259, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082128, Length=239, Percent_Identity=25.1046025104602, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1790436, Length=219, Percent_Identity=26.9406392694064, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1788713, Length=257, Percent_Identity=23.7354085603113, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788393, Length=231, Percent_Identity=25.974025974026, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 66363; Mature: 66232

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEELLQDLKMRGELDERHLLASIRLLHLLASGKSSQEVMSTLLPFFQELSGCEAVAVR
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
LREEEDYPYFQTVGFPSEFVNAENYLCAKDLAGQIKRDAIGHPVLECMCGNILCGRFDAN
HHCCCCCCCEEECCCCHHHCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCC
KSFFTPNGSFWTNSTSELLESTAEEDRQSATRNRCSADGYESVALVPLHHNEDIIGLIQF
CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEE
NDRRKDRFSKGFIALVELLADSVTVAVLRRWEEESLRKREEYYRAMVTAFDGLIYICSAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
YRIEFLNEAMKRRIGHDAIGELCYEALHGLDAICPWCKNDRIFAGESHRWVVQSPKDNRW
CHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHCCCCCCCEEEECCCCEEEEECCCCCCC
YEVSNTPIRKNNKIVSKQAMIMDVTDRQQLHEELLQKQQDLILANDLLESRVAERTSNLE
EECCCCCCCCCCCEECCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAMREQESFSYSVSHDLRAPLRHINSFSAIVMEEFSNELPAPVKDYLVRIRSASNRMGGL
HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHH
IDHLLELSRVGRAALKLEPVDLSMMAASILTALQETELKRTVKIFVEEDVRVLGDRTLLQ
HHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QLLENLLGNAWKYTSKTVTAHIEFGSSKRGDSTIFYVKDNGAGFDMQYKDNLFIAFQRLH
HHHHHHHCCCEEECCCEEEEEEEECCCCCCCCEEEEEECCCCCCCEEECCCEEEEHHHHH
TAEFEGEGIGLTTAQRIIHRHSGDIWAEGEVGKGATFYFTLPN
HHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCC
>Mature Secondary Structure 
TTEELLQDLKMRGELDERHLLASIRLLHLLASGKSSQEVMSTLLPFFQELSGCEAVAVR
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
LREEEDYPYFQTVGFPSEFVNAENYLCAKDLAGQIKRDAIGHPVLECMCGNILCGRFDAN
HHCCCCCCCEEECCCCHHHCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCC
KSFFTPNGSFWTNSTSELLESTAEEDRQSATRNRCSADGYESVALVPLHHNEDIIGLIQF
CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEEEE
NDRRKDRFSKGFIALVELLADSVTVAVLRRWEEESLRKREEYYRAMVTAFDGLIYICSAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
YRIEFLNEAMKRRIGHDAIGELCYEALHGLDAICPWCKNDRIFAGESHRWVVQSPKDNRW
CHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHCCCCCCCEEEECCCCEEEEECCCCCCC
YEVSNTPIRKNNKIVSKQAMIMDVTDRQQLHEELLQKQQDLILANDLLESRVAERTSNLE
EECCCCCCCCCCCEECCHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAMREQESFSYSVSHDLRAPLRHINSFSAIVMEEFSNELPAPVKDYLVRIRSASNRMGGL
HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHH
IDHLLELSRVGRAALKLEPVDLSMMAASILTALQETELKRTVKIFVEEDVRVLGDRTLLQ
HHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
QLLENLLGNAWKYTSKTVTAHIEFGSSKRGDSTIFYVKDNGAGFDMQYKDNLFIAFQRLH
HHHHHHHCCCEEECCCEEEEEEEECCCCCCCCEEEEEECCCCCCCEEECCCEEEEHHHHH
TAEFEGEGIGLTTAQRIIHRHSGDIWAEGEVGKGATFYFTLPN
HHCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]