| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116701
Identifier: 197116701
GI number: 197116701
Start: 371430
End: 372065
Strand: Direct
Name: 197116701
Synonym: Gbem_0301
Alternate gene names: NA
Gene position: 371430-372065 (Clockwise)
Preceding gene: 197116700
Following gene: 197116704
Centisome position: 8.05
GC content: 59.75
Gene sequence:
>636_bases ATGAAGATGGTGGCATTCAACGGAAGCCCTAACCGGGAAGGAAACACCTATCACGCCATCAAGCTCGTCGCCGCCGAGCT GGAAAAGGAAGGGATAGAGACCGAGATCGTCCACGTCGGCAACAAGACCATCCGCGGCTGCATCGCCTGCATGCAATGCG CGAAGCACCAGAACGAGCAGTGCGCGCTGAAGGACGACGAAGTGAACGAGTGGGTGCAGAAGATGAAGAGCGCAGACGCC ATCATCCTCGGCTCTCCGGTGCACTACGCCGGGATCGGCGGGACCCTGAAGTCGTTCCTCGACCGCGCCTTCTTCGTCGG CGGTGTCAACGGCGGCCTGTTCCGGCACAAAGTAGCCGCCTCCGTCGTGGCGGTGCGTCGCTCAGGCGGGGTGACCACCA CCGACCAATTGAACCACTTTATCAACTACTCCGAAATGCTCGTGGCGACCTCCAACTATTGGAACGTGATCCACGGCAGG GCTCCCGGCGAAGTGCTTCAGGACGGAGAAGGGATGCAGATCATGCGCGTCTTGGGCAAGAACATGGCGTGGATGATGAA GCTGGTGCAGCACGGCAAAGAAGCCGTCCCGGCACCGGAGAAAGAGGATAAGGTCTACACCCACTTCATCCGGTAA
Upstream 100 bases:
>100_bases CGACAAGTTCGTTATTGACCATTTGAGGCGAATGGTCGTATAAAACCCATCTAAATCTAAAAGAAAAGCCGGGAATACAA CCGAATTGGAGGAGCACAAT
Downstream 100 bases:
>100_bases ACCAAAGGGGACAGGCTACTTTTTTGTAAAAAAAGTAGCCTGTCCCCCTTAAAGCCTGTCCCCCTTAAAGCCCAGCCAGC GCCAACTCCTTCAGCCCTTT
Product: NADPH-dependent FMN reductase domain-containing protein
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MKMVAFNGSPNREGNTYHAIKLVAAELEKEGIETEIVHVGNKTIRGCIACMQCAKHQNEQCALKDDEVNEWVQKMKSADA IILGSPVHYAGIGGTLKSFLDRAFFVGGVNGGLFRHKVAASVVAVRRSGGVTTTDQLNHFINYSEMLVATSNYWNVIHGR APGEVLQDGEGMQIMRVLGKNMAWMMKLVQHGKEAVPAPEKEDKVYTHFIR
Sequences:
>Translated_211_residues MKMVAFNGSPNREGNTYHAIKLVAAELEKEGIETEIVHVGNKTIRGCIACMQCAKHQNEQCALKDDEVNEWVQKMKSADA IILGSPVHYAGIGGTLKSFLDRAFFVGGVNGGLFRHKVAASVVAVRRSGGVTTTDQLNHFINYSEMLVATSNYWNVIHGR APGEVLQDGEGMQIMRVLGKNMAWMMKLVQHGKEAVPAPEKEDKVYTHFIR >Mature_211_residues MKMVAFNGSPNREGNTYHAIKLVAAELEKEGIETEIVHVGNKTIRGCIACMQCAKHQNEQCALKDDEVNEWVQKMKSADA IILGSPVHYAGIGGTLKSFLDRAFFVGGVNGGLFRHKVAASVVAVRRSGGVTTTDQLNHFINYSEMLVATSNYWNVIHGR APGEVLQDGEGMQIMRVLGKNMAWMMKLVQHGKEAVPAPEKEDKVYTHFIR
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 23285; Mature: 23285
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMVAFNGSPNREGNTYHAIKLVAAELEKEGIETEIVHVGNKTIRGCIACMQCAKHQNEQ CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC CALKDDEVNEWVQKMKSADAIILGSPVHYAGIGGTLKSFLDRAFFVGGVNGGLFRHKVAA CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH SVVAVRRSGGVTTTDQLNHFINYSEMLVATSNYWNVIHGRAPGEVLQDGEGMQIMRVLGK HHHHHHHCCCCCHHHHHHHHHCHHHHEEEECCCCEEEECCCCHHHHCCCCCHHHHHHHCC NMAWMMKLVQHGKEAVPAPEKEDKVYTHFIR CHHHHHHHHHCCHHCCCCCCCCCCHHHHHCC >Mature Secondary Structure MKMVAFNGSPNREGNTYHAIKLVAAELEKEGIETEIVHVGNKTIRGCIACMQCAKHQNEQ CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC CALKDDEVNEWVQKMKSADAIILGSPVHYAGIGGTLKSFLDRAFFVGGVNGGLFRHKVAA CCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH SVVAVRRSGGVTTTDQLNHFINYSEMLVATSNYWNVIHGRAPGEVLQDGEGMQIMRVLGK HHHHHHHCCCCCHHHHHHHHHCHHHHEEEECCCCEEEECCCCHHHHCCCCCHHHHHHHCC NMAWMMKLVQHGKEAVPAPEKEDKVYTHFIR CHHHHHHHHHCCHHCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]