| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116546
Identifier: 197116546
GI number: 197116546
Start: 177572
End: 178087
Strand: Direct
Name: 197116546
Synonym: Gbem_0146
Alternate gene names: NA
Gene position: 177572-178087 (Clockwise)
Preceding gene: 197116545
Following gene: 197116547
Centisome position: 3.85
GC content: 58.91
Gene sequence:
>516_bases ATGCCGACCACCAAATCAAGCAGCGAATCGCACGCCAAGTCGTCTGAGCTCACCATCTTCGACGTGCTAAAGCAGGATCA CGAGAAGGCCCGCTACCTGTTCGACAAGGCCCAAAAAGCGGGCCGCAAGGAGATCTCCACGCTGCAGAAGTTGTTCGCCC AGCTGGAAGAGGAGCTGGAAATTCACATGGAAGGCGAGGAGCGTTTCTTCTACAGTGTCCTGGAGCAAAACGAGGAGATG CGCGACAAAGTGCTGCAGTCCTTTGAGGAGCACCAGGTGGCGAGGACCATGCTGGGCACCTTCCAGGCGCTCGCCGTCGA CGACGAGCGCTGGATGGCGAAGATGCAGGTCCTGAACGAGATCGTCGAGCATCACATGCAGGAAGAAGAGCGCGAGGTCT TCAAGCTTGCCAGGAAGGCGCTGGGCAAGGAGCAGCAGCACGAGATCGCGCTGCAGTTCCAAAGAAACAAGCGTGAGGGC CGCAAATCTTCCCGGGGAGCCCCGGTAGAGGGGTAG
Upstream 100 bases:
>100_bases CCTTTCGTCCTCAACTCCACCCTGCATGGCACGAACTGCCTGAGGAGGAGGGAGGACAAAGCGGAGAGGGCTAACGGCAA AACGTCAATAGGAGGACCGA
Downstream 100 bases:
>100_bases GGAACCACACAGCAAGGGGAAAAGGCGGCGCCGCATCCGGAAAGAGGTACTCCGGTCCTGTGCCGCCTTTTTTTGTGACA GTCAAAAAGAATGCTTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPTTKSSSESHAKSSELTIFDVLKQDHEKARYLFDKAQKAGRKEISTLQKLFAQLEEELEIHMEGEERFFYSVLEQNEEM RDKVLQSFEEHQVARTMLGTFQALAVDDERWMAKMQVLNEIVEHHMQEEEREVFKLARKALGKEQQHEIALQFQRNKREG RKSSRGAPVEG
Sequences:
>Translated_171_residues MPTTKSSSESHAKSSELTIFDVLKQDHEKARYLFDKAQKAGRKEISTLQKLFAQLEEELEIHMEGEERFFYSVLEQNEEM RDKVLQSFEEHQVARTMLGTFQALAVDDERWMAKMQVLNEIVEHHMQEEEREVFKLARKALGKEQQHEIALQFQRNKREG RKSSRGAPVEG >Mature_170_residues PTTKSSSESHAKSSELTIFDVLKQDHEKARYLFDKAQKAGRKEISTLQKLFAQLEEELEIHMEGEERFFYSVLEQNEEMR DKVLQSFEEHQVARTMLGTFQALAVDDERWMAKMQVLNEIVEHHMQEEEREVFKLARKALGKEQQHEIALQFQRNKREGR KSSRGAPVEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20081; Mature: 19950
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTKSSSESHAKSSELTIFDVLKQDHEKARYLFDKAQKAGRKEISTLQKLFAQLEEELE CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHMEGEERFFYSVLEQNEEMRDKVLQSFEEHQVARTMLGTFQALAVDDERWMAKMQVLNE HHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH IVEHHMQEEEREVFKLARKALGKEQQHEIALQFQRNKREGRKSSRGAPVEG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PTTKSSSESHAKSSELTIFDVLKQDHEKARYLFDKAQKAGRKEISTLQKLFAQLEEELE CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHMEGEERFFYSVLEQNEEMRDKVLQSFEEHQVARTMLGTFQALAVDDERWMAKMQVLNE HHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH IVEHHMQEEEREVFKLARKALGKEQQHEIALQFQRNKREGRKSSRGAPVEG HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA