Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116542

Identifier: 197116542

GI number: 197116542

Start: 174812

End: 176437

Strand: Direct

Name: 197116542

Synonym: Gbem_0142

Alternate gene names: NA

Gene position: 174812-176437 (Clockwise)

Preceding gene: 197116536

Following gene: 197116543

Centisome position: 3.79

GC content: 57.81

Gene sequence:

>1626_bases
ATGGTTGAAGAAAGCGGACAACATGCGCACGGCGCAGGTAAGAAATTGCTGAGCACGAAGCTGCTGCTCTGGATAGTGGG
AATCGTCGTCGCCCTGGTCCTGATCGTGTTCATCGCCAGTTTCTTCATCGACGAACCTTTGCGGCGCGCGACTGAAAAGA
AGATGAACCAGAGCCTCAAGGGGTACTCGGTCCGCCTTCCCAAGCTGCATTTCAGCCTGATCGGGCTTTCCATCACGCTG
AAAGGGCTCACCGTTTCGCAGCAGGCGCATCCTGAGCCGCCGGTGGCGGAGTTCCCGTACCTGCGGGCCAGCGTTCATTG
GCGCGAGATCCTCTCGGGAAAGCTGGTCGGAGAGATGAGGCTGGACGACCCGAAGATCCACATAAACCTGACACAGCTAA
AGAGCGAGGCCAAGAGCAAGGTCCCCATGAAGGAAAAGGGGTGGCAGCAGGCGGTGGAGGCCATTTACCCCTTGAAGATC
AACCACCTGAAGATCAACGACGCGAGCATTACCTACATCGACGAGGATGCCAAGCGCCCCCTCGTGCTCAGCAACCTGGA
CCTGGAGGCGAACAACATCCGCAACATCCACCTGCCGGACAAGGTCTATCCCTCATCCTTCCACCTGGAAACGGACATAT
TCAAGACCGGCCACGGGACCGTCGACGGCAAGGCCAATTTCCTGGCCGAGCCGACACCCGCGGTGAAGGCGGACCTGAAG
CTGGAAAAGGTCCCCATCGACTATTTCCAGCCGGTTTTGGCCCGCTACAACATGTCCGTCCAAGGCGGGGCGCTGAGCGG
CAACGGCGACATCGAGTACGGACGAAAGGTGCAGACGGCACGCCTGAAAAAACTGGTGATCAGCGGGGTCACTATGACCT
ACTTCCATTCGGAAAAGACCGCGGCGGTGGAGAAAAGAAGGGCGGAAAAGGTGAAGGCGGCGGCGAAAGAGGTGAGCAAC
AAGCCGAACCTGGTGCTGAGCATCGAACAGTTCGACCTGGTCCGCTCCAACCTCGGGATGATGTACAACGCAGGCGGGAA
AAAGTTCCGCATCTTTGTCGCCGACACCGATTTCAGCCTGAGCAACTTTTCCAACCAGTTCTCCCGGGGGGCGGCGAAGG
CGAAGCTAAGCGGCAAGTTCATGGGCAGCGGCATGACCAGCGCATCGGGAGACTTTCGTCCCGAGAAGAACGGCCCCGAC
TTCGATCTCTACCTGAAGATCACCAACACCCAGCTTACCTCCCTCAACGACCTGCTCCGCTCCTATGGGGATTTCGACGT
CACGGCGGGGACGTTTTCGCTGGTGACCGAGCTGCATGTGAAGAACGAGAGAGTAGACGGCTACATCAAACCGTTTTTCC
GCGACATGAAGGTCTACGACCGTCGCCAGGACAAGAACAAAGGGTTCTTTAAGCAGGTGAAGGAAATTCTGATCGGAGGC
ATCGCCAAGATCCTGGAAAACAAGCAGCGGGACCAGGTTGCGACCAAGGCGGACATCTCGGGTCCTTTGAAGAACCCGCA
GACCAGCACTTGGCAGATTGTGGTGCAACTGGTGCGCAACGCCTTCTTCAAGGCCATTGTTCCCACCTTCGAGAGGGATG
TGACGGCGCTGGGGAAAAAGCGCTAG

Upstream 100 bases:

>100_bases
AGCGGCTGCCGCGATTGACAAAGCAAAGCGAGTGCATACATTTGTTAACGGAATTTAATCATTGGCGAGGGCAGGGAGCA
CACAACCCCCTGGAGAAGAT

Downstream 100 bases:

>100_bases
AGAAGGACCCGCCGCAAAGGCAAAGGAGGTGGCTATGAGAAACGTCGTGCTGCTGATTTTAATCCTGCTGGTCATCGCGG
TGCTACCGACCTGGCCCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MVEESGQHAHGAGKKLLSTKLLLWIVGIVVALVLIVFIASFFIDEPLRRATEKKMNQSLKGYSVRLPKLHFSLIGLSITL
KGLTVSQQAHPEPPVAEFPYLRASVHWREILSGKLVGEMRLDDPKIHINLTQLKSEAKSKVPMKEKGWQQAVEAIYPLKI
NHLKINDASITYIDEDAKRPLVLSNLDLEANNIRNIHLPDKVYPSSFHLETDIFKTGHGTVDGKANFLAEPTPAVKADLK
LEKVPIDYFQPVLARYNMSVQGGALSGNGDIEYGRKVQTARLKKLVISGVTMTYFHSEKTAAVEKRRAEKVKAAAKEVSN
KPNLVLSIEQFDLVRSNLGMMYNAGGKKFRIFVADTDFSLSNFSNQFSRGAAKAKLSGKFMGSGMTSASGDFRPEKNGPD
FDLYLKITNTQLTSLNDLLRSYGDFDVTAGTFSLVTELHVKNERVDGYIKPFFRDMKVYDRRQDKNKGFFKQVKEILIGG
IAKILENKQRDQVATKADISGPLKNPQTSTWQIVVQLVRNAFFKAIVPTFERDVTALGKKR

Sequences:

>Translated_541_residues
MVEESGQHAHGAGKKLLSTKLLLWIVGIVVALVLIVFIASFFIDEPLRRATEKKMNQSLKGYSVRLPKLHFSLIGLSITL
KGLTVSQQAHPEPPVAEFPYLRASVHWREILSGKLVGEMRLDDPKIHINLTQLKSEAKSKVPMKEKGWQQAVEAIYPLKI
NHLKINDASITYIDEDAKRPLVLSNLDLEANNIRNIHLPDKVYPSSFHLETDIFKTGHGTVDGKANFLAEPTPAVKADLK
LEKVPIDYFQPVLARYNMSVQGGALSGNGDIEYGRKVQTARLKKLVISGVTMTYFHSEKTAAVEKRRAEKVKAAAKEVSN
KPNLVLSIEQFDLVRSNLGMMYNAGGKKFRIFVADTDFSLSNFSNQFSRGAAKAKLSGKFMGSGMTSASGDFRPEKNGPD
FDLYLKITNTQLTSLNDLLRSYGDFDVTAGTFSLVTELHVKNERVDGYIKPFFRDMKVYDRRQDKNKGFFKQVKEILIGG
IAKILENKQRDQVATKADISGPLKNPQTSTWQIVVQLVRNAFFKAIVPTFERDVTALGKKR
>Mature_541_residues
MVEESGQHAHGAGKKLLSTKLLLWIVGIVVALVLIVFIASFFIDEPLRRATEKKMNQSLKGYSVRLPKLHFSLIGLSITL
KGLTVSQQAHPEPPVAEFPYLRASVHWREILSGKLVGEMRLDDPKIHINLTQLKSEAKSKVPMKEKGWQQAVEAIYPLKI
NHLKINDASITYIDEDAKRPLVLSNLDLEANNIRNIHLPDKVYPSSFHLETDIFKTGHGTVDGKANFLAEPTPAVKADLK
LEKVPIDYFQPVLARYNMSVQGGALSGNGDIEYGRKVQTARLKKLVISGVTMTYFHSEKTAAVEKRRAEKVKAAAKEVSN
KPNLVLSIEQFDLVRSNLGMMYNAGGKKFRIFVADTDFSLSNFSNQFSRGAAKAKLSGKFMGSGMTSASGDFRPEKNGPD
FDLYLKITNTQLTSLNDLLRSYGDFDVTAGTFSLVTELHVKNERVDGYIKPFFRDMKVYDRRQDKNKGFFKQVKEILIGG
IAKILENKQRDQVATKADISGPLKNPQTSTWQIVVQLVRNAFFKAIVPTFERDVTALGKKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60513; Mature: 60513

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEESGQHAHGAGKKLLSTKLLLWIVGIVVALVLIVFIASFFIDEPLRRATEKKMNQSLK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GYSVRLPKLHFSLIGLSITLKGLTVSQQAHPEPPVAEFPYLRASVHWREILSGKLVGEMR
CCEEECCCCEEEEEEEEEEEECEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE
LDDPKIHINLTQLKSEAKSKVPMKEKGWQQAVEAIYPLKINHLKINDASITYIDEDAKRP
CCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEEECCCEEEEECCCCCCC
LVLSNLDLEANNIRNIHLPDKVYPSSFHLETDIFKTGHGTVDGKANFLAEPTPAVKADLK
EEEECCCCCCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCE
LEKVPIDYFQPVLARYNMSVQGGALSGNGDIEYGRKVQTARLKKLVISGVTMTYFHSEKT
EEECCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHH
AAVEKRRAEKVKAAAKEVSNKPNLVLSIEQFDLVRSNLGMMYNAGGKKFRIFVADTDFSL
HHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCEEEECCCCEEEEEEEECCCCH
SNFSNQFSRGAAKAKLSGKFMGSGMTSASGDFRPEKNGPDFDLYLKITNTQLTSLNDLLR
HHHHHHHHCCHHHHEECCEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHH
SYGDFDVTAGTFSLVTELHVKNERVDGYIKPFFRDMKVYDRRQDKNKGFFKQVKEILIGG
HCCCCEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IAKILENKQRDQVATKADISGPLKNPQTSTWQIVVQLVRNAFFKAIVPTFERDVTALGKK
HHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
R
C
>Mature Secondary Structure
MVEESGQHAHGAGKKLLSTKLLLWIVGIVVALVLIVFIASFFIDEPLRRATEKKMNQSLK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GYSVRLPKLHFSLIGLSITLKGLTVSQQAHPEPPVAEFPYLRASVHWREILSGKLVGEMR
CCEEECCCCEEEEEEEEEEEECEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEE
LDDPKIHINLTQLKSEAKSKVPMKEKGWQQAVEAIYPLKINHLKINDASITYIDEDAKRP
CCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEEECCCEEEEECCCCCCC
LVLSNLDLEANNIRNIHLPDKVYPSSFHLETDIFKTGHGTVDGKANFLAEPTPAVKADLK
EEEECCCCCCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCE
LEKVPIDYFQPVLARYNMSVQGGALSGNGDIEYGRKVQTARLKKLVISGVTMTYFHSEKT
EEECCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHH
AAVEKRRAEKVKAAAKEVSNKPNLVLSIEQFDLVRSNLGMMYNAGGKKFRIFVADTDFSL
HHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCEEEECCCCEEEEEEEECCCCH
SNFSNQFSRGAAKAKLSGKFMGSGMTSASGDFRPEKNGPDFDLYLKITNTQLTSLNDLLR
HHHHHHHHCCHHHHEECCEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHH
SYGDFDVTAGTFSLVTELHVKNERVDGYIKPFFRDMKVYDRRQDKNKGFFKQVKEILIGG
HCCCCEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IAKILENKQRDQVATKADISGPLKNPQTSTWQIVVQLVRNAFFKAIVPTFERDVTALGKK
HHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA