Click here to switch to the map view.

The map label for this gene is yybO [H]

Identifier: 197116497

GI number: 197116497

Start: 121535

End: 122782

Strand: Direct

Name: yybO [H]

Synonym: Gbem_0097

Alternate gene names: 197116497

Gene position: 121535-122782 (Clockwise)

Preceding gene: 197116495

Following gene: 197116500

Centisome position: 2.63

GC content: 62.98

Gene sequence:

>1248_bases
ATGCACGAACAGGAGCGGCTGCGCCGGCAGCGCTGGTTTATCTTCTTCATCCTGGCCTTGGTCTACATCATGGTGTACTT
CTACCGCGTCTCGCTCGCGGTCGTCGCCAAGGACGTCTCCCACGACCTGGACCTCACCCCCGCTCAGCTAGGCTCACTTT
CCAGCATCCTCTTCTACGTCTATGCCGCGGCCCAGATCCCGCTGGGGCCTATGATCGACCGGCTCGGGAGCCGGGTGGTC
ATCAGCTGCTCGGGGGTGCTCACCGCCCTCGGCGGCATCCTCTTCTCGCAGGCGGCCAACATGGGGCAGGCCATGGCCGG
CCGCGTCCTCATCGGGATCGGGACGGCATCGGTGTTGATGGCGACCTTCACCATCTTCAGCCACTGGTTCACCAAGCAGG
AATTCGGAAAGGTCTCCGGGATGATGGTCGCGACGGGAAACCTGGGGAACCTGGCGGGGACGGCGCCTTTGGCCCTGGCG
GTCGCAGCGGTTGGATGGCGCAACTCGTTTCTATCGGCGGGGGTGCTGCAGGCGGTGGTCACGGTGCTTGTCTTCGGGCT
GGTGCGCGACCGCCCCCCCGTTACCGAGCGGCATGAGGAGGAAGCGCCGGCCCGGCTGGGGATGCTGGAAGCCTGGAAAA
AGATCGTCTCCAACGGGGACTTCTGGCTTTTGGCTGCGGTAGCGTTCGCCTGGTACGGGAATTACCTGGCGGTGCAGGGG
CTTTGGGGTGGTCCCTACCTGATGGAAGTGGCAAGGCTTTCCCGGGAGGAAACGGGAAGGATGCTGATGTACACCTCGCT
CGGGTTCATCACGGGAAGCCTCATGATCGACCACGTGGCGCGCAGGATCTTTCACTCCTACAAGAAAACCCTGCTCGTCG
GGCAACTGCTCTTGTTGCTCCTCATGACGAACTTTCTGGGGCTCGCCGACAAGATGCCGACTGTGGCGCTTTCCGCCCTG
TTCTTCGGCCTGGGGCTTTGCGTCTCCAGCGGCGTGATGATCTATCCCATCGTCCGCTCCATGTTCCCGGTAGCCATAGT
GGGGACGGCACTCACGTCGCTCAACTTCTTCGTGCTGCTGGGGGCCGCATCGGTGCAGCAGGGGATGGGGATAGTGATCG
GCGCGGTCGCCAAGACGACCCCGGAGGCAACGGCTCAGGCGTATCACTCGGCGTTTCAGCTCCCCATCGGGGCACTTGCC
TTCGCCGCGGCCATGTTCTTCTTCGCTAAGGATTACTGGGAAAAGTAG

Upstream 100 bases:

>100_bases
AGAGTATCGGAATTCTACGGCAAGACAACACGGAAGGTGCATCTGTGGCTGTTGCGGCGGAGAAAACGGTGTGTTAGAGT
GCCGGCCGGGGGTAATGACA

Downstream 100 bases:

>100_bases
CAGGGAGGCAGGGGCTGGGGGCTGGGGACTGGGGACTGGGGCTAAGGGGCGAGTTCTTCTAGCGCCGACCGGAAGGCCTG
CAGGGTCTTGGATCTTGTAA

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MHEQERLRRQRWFIFFILALVYIMVYFYRVSLAVVAKDVSHDLDLTPAQLGSLSSILFYVYAAAQIPLGPMIDRLGSRVV
ISCSGVLTALGGILFSQAANMGQAMAGRVLIGIGTASVLMATFTIFSHWFTKQEFGKVSGMMVATGNLGNLAGTAPLALA
VAAVGWRNSFLSAGVLQAVVTVLVFGLVRDRPPVTERHEEEAPARLGMLEAWKKIVSNGDFWLLAAVAFAWYGNYLAVQG
LWGGPYLMEVARLSREETGRMLMYTSLGFITGSLMIDHVARRIFHSYKKTLLVGQLLLLLLMTNFLGLADKMPTVALSAL
FFGLGLCVSSGVMIYPIVRSMFPVAIVGTALTSLNFFVLLGAASVQQGMGIVIGAVAKTTPEATAQAYHSAFQLPIGALA
FAAAMFFFAKDYWEK

Sequences:

>Translated_415_residues
MHEQERLRRQRWFIFFILALVYIMVYFYRVSLAVVAKDVSHDLDLTPAQLGSLSSILFYVYAAAQIPLGPMIDRLGSRVV
ISCSGVLTALGGILFSQAANMGQAMAGRVLIGIGTASVLMATFTIFSHWFTKQEFGKVSGMMVATGNLGNLAGTAPLALA
VAAVGWRNSFLSAGVLQAVVTVLVFGLVRDRPPVTERHEEEAPARLGMLEAWKKIVSNGDFWLLAAVAFAWYGNYLAVQG
LWGGPYLMEVARLSREETGRMLMYTSLGFITGSLMIDHVARRIFHSYKKTLLVGQLLLLLLMTNFLGLADKMPTVALSAL
FFGLGLCVSSGVMIYPIVRSMFPVAIVGTALTSLNFFVLLGAASVQQGMGIVIGAVAKTTPEATAQAYHSAFQLPIGALA
FAAAMFFFAKDYWEK
>Mature_415_residues
MHEQERLRRQRWFIFFILALVYIMVYFYRVSLAVVAKDVSHDLDLTPAQLGSLSSILFYVYAAAQIPLGPMIDRLGSRVV
ISCSGVLTALGGILFSQAANMGQAMAGRVLIGIGTASVLMATFTIFSHWFTKQEFGKVSGMMVATGNLGNLAGTAPLALA
VAAVGWRNSFLSAGVLQAVVTVLVFGLVRDRPPVTERHEEEAPARLGMLEAWKKIVSNGDFWLLAAVAFAWYGNYLAVQG
LWGGPYLMEVARLSREETGRMLMYTSLGFITGSLMIDHVARRIFHSYKKTLLVGQLLLLLLMTNFLGLADKMPTVALSAL
FFGLGLCVSSGVMIYPIVRSMFPVAIVGTALTSLNFFVLLGAASVQQGMGIVIGAVAKTTPEATAQAYHSAFQLPIGALA
FAAAMFFFAKDYWEK

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI2367379, Length=272, Percent_Identity=25.7352941176471, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87082320, Length=431, Percent_Identity=22.969837587007, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45041; Mature: 45041

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEQERLRRQRWFIFFILALVYIMVYFYRVSLAVVAKDVSHDLDLTPAQLGSLSSILFYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YAAAQIPLGPMIDRLGSRVVISCSGVLTALGGILFSQAANMGQAMAGRVLIGIGTASVLM
HHHHHCCCHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHH
ATFTIFSHWFTKQEFGKVSGMMVATGNLGNLAGTAPLALAVAAVGWRNSFLSAGVLQAVV
HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLVFGLVRDRPPVTERHEEEAPARLGMLEAWKKIVSNGDFWLLAAVAFAWYGNYLAVQG
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEE
LWGGPYLMEVARLSREETGRMLMYTSLGFITGSLMIDHVARRIFHSYKKTLLVGQLLLLL
CCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTNFLGLADKMPTVALSALFFGLGLCVSSGVMIYPIVRSMFPVAIVGTALTSLNFFVLL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAASVQQGMGIVIGAVAKTTPEATAQAYHSAFQLPIGALAFAAAMFFFAKDYWEK
HHHHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHEQERLRRQRWFIFFILALVYIMVYFYRVSLAVVAKDVSHDLDLTPAQLGSLSSILFYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YAAAQIPLGPMIDRLGSRVVISCSGVLTALGGILFSQAANMGQAMAGRVLIGIGTASVLM
HHHHHCCCHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHH
ATFTIFSHWFTKQEFGKVSGMMVATGNLGNLAGTAPLALAVAAVGWRNSFLSAGVLQAVV
HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVLVFGLVRDRPPVTERHEEEAPARLGMLEAWKKIVSNGDFWLLAAVAFAWYGNYLAVQG
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEE
LWGGPYLMEVARLSREETGRMLMYTSLGFITGSLMIDHVARRIFHSYKKTLLVGQLLLLL
CCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMTNFLGLADKMPTVALSALFFGLGLCVSSGVMIYPIVRSMFPVAIVGTALTSLNFFVLL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAASVQQGMGIVIGAVAKTTPEATAQAYHSAFQLPIGALAFAAAMFFFAKDYWEK
HHHHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]