Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116492

Identifier: 197116492

GI number: 197116492

Start: 115466

End: 116026

Strand: Direct

Name: 197116492

Synonym: Gbem_0092

Alternate gene names: NA

Gene position: 115466-116026 (Clockwise)

Preceding gene: 197116488

Following gene: 308535148

Centisome position: 2.5

GC content: 58.29

Gene sequence:

>561_bases
ATGGGGATTCAAGATGATATAGCGCGTTTGGAAGTCGATCTGCGCGAGCTCATCATCAAGTACGAGCAGTACTTCTTCGG
CATTGAGAAGAGGGAACCGCTGAGACTCCTTGATACAGTCGAGCGCGCAGTGAGGCGGTACCAGAACGTGAGCATTCCCA
ACACGAGCCAGAGATTCAAGTACGAGTCGCTGGTATCCACGCTGAGCGTGCACAAGCAGAAGTGGACCCGCACCAACCGC
CTCATCGAGGAGGGGAAGTTCCAGCGGGACCGCTTCCGGATGTCGCTGCACCAAAAGGACACCCCCAAAGAACCGACCGT
CGCAGCCCCCACCACGAAGAGTACCAACGACTCCCAGCTGGAAAACGTGTACCAGCAGTACATCGACGCCCGCCGGGCCT
GCAACCTGCCGGTGGAGAACGTCACCCGTGAAAAAGTCGCCGAGGCGATCAGCCGCCAGAAACCCGCCCTGATGGAAAAG
TACCGCTGCAAGGACGTCGACTTCGTCGTCGTCATCGAAGGGGGGAAACCCTCCCTGAAGGCCCGCCCGAAAAATTCATG
A

Upstream 100 bases:

>100_bases
CCCAGTCAAGCTGTTTCCCCTGGCTGACAGTAGCTACAACCCCCGCTTTTTCTCATTTACACGATTGTAACTTATCGTTA
TAGTCGGTTTTGGAGGTTTC

Downstream 100 bases:

>100_bases
ACATTACGCTCATAGCCATACATCCGGAGCGCTCGCCGCAGGCGGTGCCGCTTGCCTGCGCCTTTCTCAAGGAGGCACTT
CTTGCCGATGCATCTTTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MGIQDDIARLEVDLRELIIKYEQYFFGIEKREPLRLLDTVERAVRRYQNVSIPNTSQRFKYESLVSTLSVHKQKWTRTNR
LIEEGKFQRDRFRMSLHQKDTPKEPTVAAPTTKSTNDSQLENVYQQYIDARRACNLPVENVTREKVAEAISRQKPALMEK
YRCKDVDFVVVIEGGKPSLKARPKNS

Sequences:

>Translated_186_residues
MGIQDDIARLEVDLRELIIKYEQYFFGIEKREPLRLLDTVERAVRRYQNVSIPNTSQRFKYESLVSTLSVHKQKWTRTNR
LIEEGKFQRDRFRMSLHQKDTPKEPTVAAPTTKSTNDSQLENVYQQYIDARRACNLPVENVTREKVAEAISRQKPALMEK
YRCKDVDFVVVIEGGKPSLKARPKNS
>Mature_185_residues
GIQDDIARLEVDLRELIIKYEQYFFGIEKREPLRLLDTVERAVRRYQNVSIPNTSQRFKYESLVSTLSVHKQKWTRTNRL
IEEGKFQRDRFRMSLHQKDTPKEPTVAAPTTKSTNDSQLENVYQQYIDARRACNLPVENVTREKVAEAISRQKPALMEKY
RCKDVDFVVVIEGGKPSLKARPKNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21804; Mature: 21673

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIQDDIARLEVDLRELIIKYEQYFFGIEKREPLRLLDTVERAVRRYQNVSIPNTSQRFK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
YESLVSTLSVHKQKWTRTNRLIEEGKFQRDRFRMSLHQKDTPKEPTVAAPTTKSTNDSQL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
ENVYQQYIDARRACNLPVENVTREKVAEAISRQKPALMEKYRCKDVDFVVVIEGGKPSLK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCC
ARPKNS
CCCCCC
>Mature Secondary Structure 
GIQDDIARLEVDLRELIIKYEQYFFGIEKREPLRLLDTVERAVRRYQNVSIPNTSQRFK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
YESLVSTLSVHKQKWTRTNRLIEEGKFQRDRFRMSLHQKDTPKEPTVAAPTTKSTNDSQL
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
ENVYQQYIDARRACNLPVENVTREKVAEAISRQKPALMEKYRCKDVDFVVVIEGGKPSLK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCC
ARPKNS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA