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The map label for this gene is 197116482

Identifier: 197116482

GI number: 197116482

Start: 99397

End: 100401

Strand: Reverse

Name: 197116482

Synonym: Gbem_0082

Alternate gene names: NA

Gene position: 100401-99397 (Counterclockwise)

Preceding gene: 197116486

Following gene: 197116465

Centisome position: 2.18

GC content: 62.89

Gene sequence:

>1005_bases
ATGCAGAGAAAAGCCATAGCCCTTTTGTCGGGCGGACTCGATTCCACCCTCGCGGTCAAGGTCCTCCTCGACCAGGGGAT
CGCCGTCGAGGCCCTCAACTTCACCTCCCCTTTTTGCACCTGCACCGGAAAGAACGCCGGCTGCAAGTCGGAGGCGGTCC
GTGTGGCGGAAGAGTTCAAGATCCCCATCAAGGTGATGCACAAGGGGGCGGACTACCTCGAGGTAGTCAGAAACCCCAAG
CACGGCCACGGCAAAGGGATGAACCCCTGCATCGACTGCCGCATCTTCCTCTTGAAAAAGGCCAAGGAATACATGCTGGA
GTCGGGCGCCGATTTCGTCTTCACCGGAGAGGTTCTGGGACAGCGCCCCATGAGCCAGCGCCGCGACACCCTGCGCATCA
TCGAGAAAGAGAGCGGCCTCGAAGGGCTCCTTTTGCGCCCCCTCTCGGCTAAGCACTTCCAGCCCACCATCCCGGAGCAG
GAAGGGTGGGTCGACCGCGAGAAGCTCCTCTCCATCCAGGGGAGATCCAGGAAGGAGCAGTTCGAGCTCGCGGCCGAGTT
GGACGTGAAGAACTACCCCTGCCCCGCCGGCGGCTGCCTCTTGACCGAGCCCTCCTTCGTCGGCAAGATTCGCGACGTCT
TCGACCACTCGGACGAGCTCAACATGAGGGACTTCCGGCTCCTCAAGCTCGGGCGGCACTTCAGGATCGGGCCCCGGACC
AAGGTGGTCCTTGGCCGCAACGAAGGGGAGAACGAACTCCTGGAACGGGCCGTTCAGCCCGGCGAGGCAACCCTGCGCTG
GGTCGAGGGGATGAGTCCGCTTGCCGCGGTCATGGGGGAAACTACCGATCACCTTTTGGAAAAGGCGGGGCAGATACTTT
TGCGCTACACCAAGGCGGAACCCGGTTGCGCGGCCACCCTGAGCATTTTGCGCGACGGCAGCGAAACGGAGCTGAAGACG
GTGAATGCTCTCGACGAGGCGGCCGTGGAGGCGCTCAGGCGCTAG

Upstream 100 bases:

>100_bases
AATTGATTCACCGTTTCTTCGCCGCCGCCGCTTCATCAGTCGGCCTAACATCGTTGTCAATTGTCAATCGTCAATTGTCA
ATTGATTTTCAGGAGTTTAC

Downstream 100 bases:

>100_bases
CCGCCATCGCCCCGCAGGCGCCTCTTAGCGGCTAGCCTCCCAAGTGGAAGCGGTAGACGTTCTTGCCGTCCTGCTTGGCC
TGGTACATGGCGTAGTCCGC

Product: thiamin biosynthesis protein ThiI-like adenine nucleotide alpha hydrolase superfamily protein

Products: NA

Alternate protein names: TRNA-Methyltransferase; Thiamine Biosynthesis ProteinExsB; tRNA Methyltransferase; Argininosuccinate Synthase; Queuosine Synthesis; tRNA -Methyltransferase; tRNA Methyl Transferase; Thiamine Biosynthesis Protein-Like Protein; tRNA Methyl Transferase-Like Protein; ThiI Family Protein; Arginino Succinate Synthase; TRNA(5-Methylaminomethyl-2-Thiouridylate) Methyltransferase

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQRKAIALLSGGLDSTLAVKVLLDQGIAVEALNFTSPFCTCTGKNAGCKSEAVRVAEEFKIPIKVMHKGADYLEVVRNPK
HGHGKGMNPCIDCRIFLLKKAKEYMLESGADFVFTGEVLGQRPMSQRRDTLRIIEKESGLEGLLLRPLSAKHFQPTIPEQ
EGWVDREKLLSIQGRSRKEQFELAAELDVKNYPCPAGGCLLTEPSFVGKIRDVFDHSDELNMRDFRLLKLGRHFRIGPRT
KVVLGRNEGENELLERAVQPGEATLRWVEGMSPLAAVMGETTDHLLEKAGQILLRYTKAEPGCAATLSILRDGSETELKT
VNALDEAAVEALRR

Sequences:

>Translated_334_residues
MQRKAIALLSGGLDSTLAVKVLLDQGIAVEALNFTSPFCTCTGKNAGCKSEAVRVAEEFKIPIKVMHKGADYLEVVRNPK
HGHGKGMNPCIDCRIFLLKKAKEYMLESGADFVFTGEVLGQRPMSQRRDTLRIIEKESGLEGLLLRPLSAKHFQPTIPEQ
EGWVDREKLLSIQGRSRKEQFELAAELDVKNYPCPAGGCLLTEPSFVGKIRDVFDHSDELNMRDFRLLKLGRHFRIGPRT
KVVLGRNEGENELLERAVQPGEATLRWVEGMSPLAAVMGETTDHLLEKAGQILLRYTKAEPGCAATLSILRDGSETELKT
VNALDEAAVEALRR
>Mature_334_residues
MQRKAIALLSGGLDSTLAVKVLLDQGIAVEALNFTSPFCTCTGKNAGCKSEAVRVAEEFKIPIKVMHKGADYLEVVRNPK
HGHGKGMNPCIDCRIFLLKKAKEYMLESGADFVFTGEVLGQRPMSQRRDTLRIIEKESGLEGLLLRPLSAKHFQPTIPEQ
EGWVDREKLLSIQGRSRKEQFELAAELDVKNYPCPAGGCLLTEPSFVGKIRDVFDHSDELNMRDFRLLKLGRHFRIGPRT
KVVLGRNEGENELLERAVQPGEATLRWVEGMSPLAAVMGETTDHLLEKAGQILLRYTKAEPGCAATLSILRDGSETELKT
VNALDEAAVEALRR

Specific function: Unknown

COG id: COG0482

COG function: function code J; Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37036; Mature: 37036

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRKAIALLSGGLDSTLAVKVLLDQGIAVEALNFTSPFCTCTGKNAGCKSEAVRVAEEFK
CCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHC
IPIKVMHKGADYLEVVRNPKHGHGKGMNPCIDCRIFLLKKAKEYMLESGADFVFTGEVLG
CCHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHC
QRPMSQRRDTLRIIEKESGLEGLLLRPLSAKHFQPTIPEQEGWVDREKLLSIQGRSRKEQ
CCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHH
FELAAELDVKNYPCPAGGCLLTEPSFVGKIRDVFDHSDELNMRDFRLLKLGRHFRIGPRT
HHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEECCCCE
KVVLGRNEGENELLERAVQPGEATLRWVEGMSPLAAVMGETTDHLLEKAGQILLRYTKAE
EEEEECCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHEEEEEECCC
PGCAATLSILRDGSETELKTVNALDEAAVEALRR
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQRKAIALLSGGLDSTLAVKVLLDQGIAVEALNFTSPFCTCTGKNAGCKSEAVRVAEEFK
CCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHC
IPIKVMHKGADYLEVVRNPKHGHGKGMNPCIDCRIFLLKKAKEYMLESGADFVFTGEVLG
CCHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHC
QRPMSQRRDTLRIIEKESGLEGLLLRPLSAKHFQPTIPEQEGWVDREKLLSIQGRSRKEQ
CCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHH
FELAAELDVKNYPCPAGGCLLTEPSFVGKIRDVFDHSDELNMRDFRLLKLGRHFRIGPRT
HHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEECCCCE
KVVLGRNEGENELLERAVQPGEATLRWVEGMSPLAAVMGETTDHLLEKAGQILLRYTKAE
EEEEECCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHEEEEEECCC
PGCAATLSILRDGSETELKTVNALDEAAVEALRR
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA